RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 DBNLQ9UJU6 430 aaKnown RBP10.88□□□□□ -0.67
GTF2A1-204ENST00000556268 CUL9Q8IWT3 2517 aa10.87□□□□□ -0.67
GTF2A1-204ENST00000556268 SIPA1L1O43166 1804 aa10.87□□□□□ -0.67
GTF2A1-204ENST00000556268 TMEM238LA0A1B0GVL6 79 aa10.87□□□□□ -0.67
GTF2A1-204ENST00000556268 MEGF11A6BM72 1044 aa10.87□□□□□ -0.67
GTF2A1-204ENST00000556268 DHX15O43143 795 aaKnown RBP10.87□□□□□ -0.67
GTF2A1-204ENST00000556268 HLA-DOAP06340 250 aa10.87□□□□□ -0.67
GTF2A1-204ENST00000556268 CYP7A1P22680 504 aa10.87□□□□□ -0.67
GTF2A1-204ENST00000556268 FAM109BQ6ICB4 259 aaPredicted RBP10.87□□□□□ -0.67
GTF2A1-204ENST00000556268 ACER1Q8TDN7 264 aa10.87□□□□□ -0.67
GTF2A1-204ENST00000556268 MYRFLQ96LU7 910 aa10.87□□□□□ -0.67
GTF2A1-204ENST00000556268 ASB16Q96NS5 453 aa10.87□□□□□ -0.67
GTF2A1-204ENST00000556268 APBA2Q99767 749 aa10.87□□□□□ -0.67
GTF2A1-204ENST00000556268 TMPRSS13Q9BYE2 586 aa10.87□□□□□ -0.67
GTF2A1-204ENST00000556268 SERPINB13Q9UIV8 391 aa10.87□□□□□ -0.67
GTF2A1-204ENST00000556268 RAXQ9Y2V3 346 aa10.87□□□□□ -0.67
GTF2A1-204ENST00000556268 SART1O43290 800 aaKnown RBP10.86□□□□□ -0.67
GTF2A1-204ENST00000556268 GLRX3O76003 335 aaKnown RBP10.86□□□□□ -0.67
GTF2A1-204ENST00000556268 FSTP19883 344 aa10.86□□□□□ -0.67
GTF2A1-204ENST00000556268 GUCY1A2P33402 732 aa10.86□□□□□ -0.67
GTF2A1-204ENST00000556268 SHMT1P34896 483 aa10.86□□□□□ -0.67
GTF2A1-204ENST00000556268 USP14P54578 494 aa10.86□□□□□ -0.67
GTF2A1-204ENST00000556268 CCNA1P78396 465 aa10.86□□□□□ -0.67
GTF2A1-204ENST00000556268 GABPAQ06546 454 aa10.86□□□□□ -0.67
GTF2A1-204ENST00000556268 CERKLQ49MI3 558 aaPredicted RBP10.86□□□□□ -0.67
GTF2A1-204ENST00000556268 ZKSCAN2Q63HK3 967 aa10.86□□□□□ -0.67
GTF2A1-204ENST00000556268 Q7L0L9 218 aa10.86□□□□□ -0.67
GTF2A1-204ENST00000556268 TTC6Q86TZ1 520 aa10.86□□□□□ -0.67
GTF2A1-204ENST00000556268 CCAR1Q8IX12 1150 aaKnown RBP10.86□□□□□ -0.67
GTF2A1-204ENST00000556268 FRAT1Q92837 279 aaPredicted RBP10.86□□□□□ -0.67
GTF2A1-204ENST00000556268 TRIM56Q9BRZ2 755 aaKnown RBP10.86□□□□□ -0.67
GTF2A1-204ENST00000556268 PAGR1Q9BTK6 254 aa10.86□□□□□ -0.67
GTF2A1-204ENST00000556268 CCDC8Q9H0W5 538 aaPredicted RBP10.86□□□□□ -0.67
GTF2A1-204ENST00000556268 BTBD7Q9P203 1132 aa10.86□□□□□ -0.67
GTF2A1-204ENST00000556268 PLCD1P51178 756 aa10.85□□□□□ -0.67
GTF2A1-204ENST00000556268 GRB14Q14449 540 aa10.85□□□□□ -0.67
GTF2A1-204ENST00000556268 ABCB5Q2M3G0 1257 aa10.85□□□□□ -0.67
GTF2A1-204ENST00000556268 MFSD14CQ5VZR4 134 aa10.85□□□□□ -0.67
GTF2A1-204ENST00000556268 MAGEB6Q8N7X4 407 aa10.85□□□□□ -0.67
GTF2A1-204ENST00000556268 TRPV1Q8NER1 839 aa10.85□□□□□ -0.67
GTF2A1-204ENST00000556268 LPAR1Q92633 364 aa10.85□□□□□ -0.67
GTF2A1-204ENST00000556268 RIOK1Q9BRS2 568 aaKnown RBP10.85□□□□□ -0.67
GTF2A1-204ENST00000556268 ANTXR1Q9H6X2 564 aa10.85□□□□□ -0.67
GTF2A1-204ENST00000556268 HOXC10Q9NYD6 342 aa10.85□□□□□ -0.67
GTF2A1-204ENST00000556268 DNAH12Q6ZR08 3092 aa10.85□□□□□ -0.67
GTF2A1-204ENST00000556268 ATAD5Q96QE3 1844 aa10.84□□□□□ -0.67
GTF2A1-204ENST00000556268 STRNO43815 780 aa10.84□□□□□ -0.67
GTF2A1-204ENST00000556268 EIF4EBP3O60516 100 aaPredicted RBP10.84□□□□□ -0.67
GTF2A1-204ENST00000556268 MSCO60682 206 aa10.84□□□□□ -0.67
GTF2A1-204ENST00000556268 IDH1O75874 414 aaKnown RBP10.84□□□□□ -0.67
GTF2A1-204ENST00000556268 CTSBP07858 339 aa10.84□□□□□ -0.67
GTF2A1-204ENST00000556268 PDIA4P13667 645 aaKnown RBP10.84□□□□□ -0.67
GTF2A1-204ENST00000556268 VCAM1P19320 739 aa10.84□□□□□ -0.67
GTF2A1-204ENST00000556268 MAOBP27338 520 aa10.84□□□□□ -0.67
GTF2A1-204ENST00000556268 MAPK8P45983 427 aa10.84□□□□□ -0.67
GTF2A1-204ENST00000556268 ATP2B2Q01814 1243 aa10.84□□□□□ -0.67
GTF2A1-204ENST00000556268 OS9Q13438 667 aaPredicted RBP10.84□□□□□ -0.67
GTF2A1-204ENST00000556268 COG2Q14746 738 aa10.84□□□□□ -0.67
GTF2A1-204ENST00000556268 RAB3GAP1Q15042 981 aa10.84□□□□□ -0.67
GTF2A1-204ENST00000556268 SIAH1Q8IUQ4 282 aa10.84□□□□□ -0.67
GTF2A1-204ENST00000556268 Q8N3U1 123 aa10.84□□□□□ -0.67
GTF2A1-204ENST00000556268 MIGA1Q8NAN2 632 aa10.84□□□□□ -0.67
GTF2A1-204ENST00000556268 NPLOC4Q8TAT6 608 aa10.84□□□□□ -0.67
GTF2A1-204ENST00000556268 SENP6Q9GZR1 1112 aaPredicted RBP10.84□□□□□ -0.67
GTF2A1-204ENST00000556268 DDX20Q9UHI6 824 aaKnown RBP10.84□□□□□ -0.67
GTF2A1-204ENST00000556268 A0A1W2PRG0 241 aa10.83□□□□□ -0.68
GTF2A1-204ENST00000556268 DNM1LO00429 736 aa10.83□□□□□ -0.68
GTF2A1-204ENST00000556268 CYP11A1P05108 521 aa10.83□□□□□ -0.68
GTF2A1-204ENST00000556268 MAP3K12Q12852 859 aa10.83□□□□□ -0.68
GTF2A1-204ENST00000556268 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.83□□□□□ -0.681e-30■■■■■ 65.7
GTF2A1-204ENST00000556268 OLFML2BQ68BL8 750 aa10.83□□□□□ -0.68
GTF2A1-204ENST00000556268 FAM20CQ8IXL6 584 aa10.83□□□□□ -0.68
GTF2A1-204ENST00000556268 SMG8Q8ND04 991 aaKnown RBP10.83□□□□□ -0.68
GTF2A1-204ENST00000556268 BCO2Q9BYV7 579 aa10.83□□□□□ -0.68
GTF2A1-204ENST00000556268 RPAP3Q9H6T3 665 aaPredicted RBP10.83□□□□□ -0.68
GTF2A1-204ENST00000556268 SUGCTQ9HAC7 445 aa10.83□□□□□ -0.68
GTF2A1-204ENST00000556268 CYP4F12Q9HCS2 524 aa10.83□□□□□ -0.68
GTF2A1-204ENST00000556268 CABP5Q9NP86 173 aa10.83□□□□□ -0.68
GTF2A1-204ENST00000556268 STOML1Q9UBI4 398 aa10.83□□□□□ -0.68
GTF2A1-204ENST00000556268 DDX60LQ5H9U9 1706 aaKnown RBP10.83□□□□□ -0.68
GTF2A1-204ENST00000556268 LAMA2P24043 3122 aaKnown RBP10.82□□□□□ -0.68
GTF2A1-204ENST00000556268 GAS2O43903 313 aaKnown RBP10.82□□□□□ -0.68
GTF2A1-204ENST00000556268 TIAF1O95411 115 aa10.82□□□□□ -0.68
GTF2A1-204ENST00000556268 ECEL1O95672 775 aa10.82□□□□□ -0.68
GTF2A1-204ENST00000556268 RLBP1P12271 317 aa10.82□□□□□ -0.68
GTF2A1-204ENST00000556268 CYBAP13498 195 aa10.82□□□□□ -0.68
GTF2A1-204ENST00000556268 CYP2C19P33261 490 aa10.82□□□□□ -0.68
GTF2A1-204ENST00000556268 FAAP100Q0VG06 881 aa10.82□□□□□ -0.68
GTF2A1-204ENST00000556268 SEPT2Q15019 361 aa10.82□□□□□ -0.68
GTF2A1-204ENST00000556268 POU4F3Q15319 338 aa10.82□□□□□ -0.68
GTF2A1-204ENST00000556268 ZYXQ15942 572 aaKnown RBP10.82□□□□□ -0.68
GTF2A1-204ENST00000556268 RPS26P11Q5JNZ5 115 aaPredicted RBP10.82□□□□□ -0.68
GTF2A1-204ENST00000556268 ARRDC4Q8NCT1 418 aa10.82□□□□□ -0.68
GTF2A1-204ENST00000556268 SHCBP1Q8NEM2 672 aa10.82□□□□□ -0.68
GTF2A1-204ENST00000556268 MOV10L1Q9BXT6 1211 aaKnown RBP10.82□□□□□ -0.68
GTF2A1-204ENST00000556268 CDK5RAP2Q96SN8 1893 aa10.81□□□□□ -0.68
GTF2A1-204ENST00000556268 COBLO75128 1261 aa10.81□□□□□ -0.68
GTF2A1-204ENST00000556268 BMP3P12645 472 aa10.81□□□□□ -0.68
GTF2A1-204ENST00000556268 SNX17Q15036 470 aa10.81□□□□□ -0.68
GTF2A1-204ENST00000556268 KIAA1755Q5JYT7 1200 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms