RNA–Protein interactions for RNA: ENST00000556217.5

SUPT16H-205, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 1,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-205ENST00000556217 KCNA2P16389 499 aa17.73■□□□□ 0.43
SUPT16H-205ENST00000556217 MARK3P27448 753 aa17.73■□□□□ 0.43
SUPT16H-205ENST00000556217 PTPN5P54829 565 aa17.73■□□□□ 0.43
SUPT16H-205ENST00000556217 ANTXR2P58335 489 aa17.73■□□□□ 0.43
SUPT16H-205ENST00000556217 MTMR1Q13613 665 aa17.73■□□□□ 0.43
SUPT16H-205ENST00000556217 CTC1Q2NKJ3 1217 aa17.73■□□□□ 0.43
SUPT16H-205ENST00000556217 FBXO47Q5MNV8 452 aa17.73■□□□□ 0.43
SUPT16H-205ENST00000556217 MB21D2Q8IYB1 491 aaPredicted RBP17.73■□□□□ 0.43
SUPT16H-205ENST00000556217 TMTC2Q8N394 836 aa17.73■□□□□ 0.43
SUPT16H-205ENST00000556217 DNAJB3Q8WWF6 145 aa17.73■□□□□ 0.43
SUPT16H-205ENST00000556217 TNPO1Q92973 898 aaKnown RBP17.73■□□□□ 0.43
SUPT16H-205ENST00000556217 PPP2R3CQ969Q6 453 aa17.73■□□□□ 0.43
SUPT16H-205ENST00000556217 PHOX2BQ99453 314 aa17.73■□□□□ 0.43
SUPT16H-205ENST00000556217 MTA3Q9BTC8 594 aa17.73■□□□□ 0.43
SUPT16H-205ENST00000556217 LY9Q9HBG7 655 aa17.73■□□□□ 0.43
SUPT16H-205ENST00000556217 TAF6LQ9Y6J9 622 aa17.73■□□□□ 0.43
SUPT16H-205ENST00000556217 CFAP54Q96N23 3096 aa17.73■□□□□ 0.43
SUPT16H-205ENST00000556217 C5orf42Q9H799 3197 aa17.72■□□□□ 0.43
SUPT16H-205ENST00000556217 GSTTP1A0A1W2PQM5 241 aa17.72■□□□□ 0.43
SUPT16H-205ENST00000556217 MBLAC1A4D2B0 266 aaPredicted RBP17.72■□□□□ 0.43
SUPT16H-205ENST00000556217 RRN3P2A6NIE6 340 aa17.72■□□□□ 0.43
SUPT16H-205ENST00000556217 SPDYE3A6NKU9 549 aa17.72■□□□□ 0.43
SUPT16H-205ENST00000556217 MAFGO15525 162 aa17.72■□□□□ 0.43
SUPT16H-205ENST00000556217 ATP9AO75110 1047 aa17.72■□□□□ 0.43
SUPT16H-205ENST00000556217 LINC00271P0C7V0 271 aa17.72■□□□□ 0.43
SUPT16H-205ENST00000556217 PDE4AP27815 886 aa17.72■□□□□ 0.43
SUPT16H-205ENST00000556217 LTBRP36941 435 aa17.72■□□□□ 0.43
SUPT16H-205ENST00000556217 MRPS6P82932 125 aaKnown RBP17.72■□□□□ 0.43
SUPT16H-205ENST00000556217 HYAL1Q12794 435 aa17.72■□□□□ 0.43
SUPT16H-205ENST00000556217 SMAD2Q15796 467 aaKnown RBP17.72■□□□□ 0.43
SUPT16H-205ENST00000556217 IER5Q5VY09 327 aa17.72■□□□□ 0.43
SUPT16H-205ENST00000556217 NFXL1Q6ZNB6 911 aa17.72■□□□□ 0.43
SUPT16H-205ENST00000556217 ZNF689Q96CS4 500 aaPredicted RBP17.72■□□□□ 0.43
SUPT16H-205ENST00000556217 PRRX2Q99811 253 aa17.72■□□□□ 0.43
SUPT16H-205ENST00000556217 MYL10Q9BUA6 226 aa17.72■□□□□ 0.43
SUPT16H-205ENST00000556217 FTHL17Q9BXU8 183 aa17.72■□□□□ 0.43
SUPT16H-205ENST00000556217 RC3H2Q9HBD1 1191 aaKnown RBP17.72■□□□□ 0.43
SUPT16H-205ENST00000556217 CDY2AQ9Y6F7 541 aa17.72■□□□□ 0.43
SUPT16H-205ENST00000556217 USP34Q70CQ2 3546 aa17.72■□□□□ 0.43
SUPT16H-205ENST00000556217 LOXHD1Q8IVV2 1947 aa17.71■□□□□ 0.43
SUPT16H-205ENST00000556217 CCDC69A6NI79 296 aa17.71■□□□□ 0.43
SUPT16H-205ENST00000556217 M0QZ92 97 aa17.71■□□□□ 0.43
SUPT16H-205ENST00000556217 SGSM2O43147 1006 aa17.71■□□□□ 0.43
SUPT16H-205ENST00000556217 DGKIO75912 1065 aa17.71■□□□□ 0.43
SUPT16H-205ENST00000556217 MMP1P03956 469 aa17.71■□□□□ 0.43
SUPT16H-205ENST00000556217 CALM1P0DP23 149 aa17.71■□□□□ 0.43
SUPT16H-205ENST00000556217 CALM2P0DP24 149 aa17.71■□□□□ 0.43
SUPT16H-205ENST00000556217 CALM3P0DP25 149 aa17.71■□□□□ 0.43
SUPT16H-205ENST00000556217 ITGB5P18084 799 aa17.71■□□□□ 0.43
SUPT16H-205ENST00000556217 IRS1P35568 1242 aa17.71■□□□□ 0.43
SUPT16H-205ENST00000556217 FOXK2Q01167 660 aa17.71■□□□□ 0.43
SUPT16H-205ENST00000556217 MAP4K1Q92918 833 aa17.71■□□□□ 0.43
SUPT16H-205ENST00000556217 P2RX5Q93086 422 aa17.71■□□□□ 0.43
SUPT16H-205ENST00000556217 AZI2Q9H6S1 392 aa17.71■□□□□ 0.43
SUPT16H-205ENST00000556217 SQORQ9Y6N5 450 aa17.71■□□□□ 0.43
SUPT16H-205ENST00000556217 TECTAO75443 2155 aa17.71■□□□□ 0.43
SUPT16H-205ENST00000556217 ZFHX2Q9C0A1 2572 aaPredicted RBP17.71■□□□□ 0.43
SUPT16H-205ENST00000556217 PTPRZ1P23471 2315 aaPredicted RBP17.7■□□□□ 0.42
SUPT16H-205ENST00000556217 PRC1O43663 620 aa17.7■□□□□ 0.42
SUPT16H-205ENST00000556217 MCM5P33992 734 aa17.7■□□□□ 0.42
SUPT16H-205ENST00000556217 IGBP1P78318 339 aa17.7■□□□□ 0.42
SUPT16H-205ENST00000556217 SMAD4Q13485 552 aaKnown RBP17.7■□□□□ 0.42
SUPT16H-205ENST00000556217 CLUL1Q15846 466 aa17.7■□□□□ 0.42
SUPT16H-205ENST00000556217 PKN1Q16512 942 aa17.7■□□□□ 0.42
SUPT16H-205ENST00000556217 NAALADL2Q58DX5 795 aa17.7■□□□□ 0.42
SUPT16H-205ENST00000556217 HERC4Q5GLZ8 1057 aaPredicted RBP17.7■□□□□ 0.42
SUPT16H-205ENST00000556217 MARCH8Q5T0T0 291 aa17.7■□□□□ 0.42
SUPT16H-205ENST00000556217 CMTR2Q8IYT2 770 aaKnown RBP17.7■□□□□ 0.42
SUPT16H-205ENST00000556217 SRBD1Q8N5C6 995 aaKnown RBP17.7■□□□□ 0.42
SUPT16H-205ENST00000556217 TMEM87BQ96K49 555 aa17.7■□□□□ 0.42
SUPT16H-205ENST00000556217 IGFLR1Q9H665 355 aa17.7■□□□□ 0.42
SUPT16H-205ENST00000556217 JPH1Q9HDC5 661 aaPredicted RBP17.7■□□□□ 0.42
SUPT16H-205ENST00000556217 PKD2L1Q9P0L9 805 aa17.7■□□□□ 0.42
SUPT16H-205ENST00000556217 UBIAD1Q9Y5Z9 338 aa17.7■□□□□ 0.42
SUPT16H-205ENST00000556217 SPTBN4Q9H254 2564 aa17.7■□□□□ 0.42
SUPT16H-205ENST00000556217 KIAA1671Q9BY89 1806 aa17.7■□□□□ 0.42
SUPT16H-205ENST00000556217 MBTPS2O43462 519 aa17.69■□□□□ 0.42
SUPT16H-205ENST00000556217 PLEKHA8P1O95397 391 aa17.69■□□□□ 0.42
SUPT16H-205ENST00000556217 STAG3L1P0CL83 205 aa17.69■□□□□ 0.42
SUPT16H-205ENST00000556217 INSRRP14616 1297 aa17.69■□□□□ 0.42
SUPT16H-205ENST00000556217 CD52P31358 61 aa17.69■□□□□ 0.42
SUPT16H-205ENST00000556217 BMP8AQ7Z5Y6 402 aa17.69■□□□□ 0.42
SUPT16H-205ENST00000556217 NPAS4Q8IUM7 802 aa17.69■□□□□ 0.42
SUPT16H-205ENST00000556217 PRSS33Q8NF86 280 aa17.69■□□□□ 0.42
SUPT16H-205ENST00000556217 FAM49AQ9H0Q0 323 aaPredicted RBP17.69■□□□□ 0.42
SUPT16H-205ENST00000556217 ALG13Q9NP73 1137 aaKnown RBP17.69■□□□□ 0.42
SUPT16H-205ENST00000556217 JADE2Q9NQC1 790 aa17.69■□□□□ 0.42
SUPT16H-205ENST00000556217 MUTYHQ9UIF7 546 aa17.69■□□□□ 0.42
SUPT16H-205ENST00000556217 CD207Q9UJ71 328 aa17.69■□□□□ 0.42
SUPT16H-205ENST00000556217 PLAGL2Q9UPG8 496 aa17.69■□□□□ 0.42
SUPT16H-205ENST00000556217 TRPC6Q9Y210 931 aa17.69■□□□□ 0.42
SUPT16H-205ENST00000556217 RBM8AQ9Y5S9 174 aaKnown RBP17.69■□□□□ 0.42
SUPT16H-205ENST00000556217 CACNA1HO95180 2353 aa17.68■□□□□ 0.42
SUPT16H-205ENST00000556217 CSPG5O95196 566 aa17.68■□□□□ 0.42
SUPT16H-205ENST00000556217 DLX2Q07687 328 aaPredicted RBP17.68■□□□□ 0.42
SUPT16H-205ENST00000556217 EDAQ92838 391 aa17.68■□□□□ 0.42
SUPT16H-205ENST00000556217 SDF4Q9BRK5 362 aa17.68■□□□□ 0.42
SUPT16H-205ENST00000556217 AGO3Q9H9G7 860 aaKnown RBP17.68■□□□□ 0.42
SUPT16H-205ENST00000556217 SLC9A2Q9UBY0 812 aa17.68■□□□□ 0.42
SUPT16H-205ENST00000556217 PCDHA6Q9UN73 950 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms