RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 LMBR1Q8WVP7 490 aa17.2■□□□□ 0.34
ACTN1-217ENST00000556203 SLC5A5Q92911 643 aa17.2■□□□□ 0.34
ACTN1-217ENST00000556203 GJA10Q969M2 543 aa17.2■□□□□ 0.34
ACTN1-217ENST00000556203 LRCH3Q96II8 777 aa17.2■□□□□ 0.34
ACTN1-217ENST00000556203 TMX3Q96JJ7 454 aa17.2■□□□□ 0.34
ACTN1-217ENST00000556203 C8orf76Q96K31 380 aa17.2■□□□□ 0.34
ACTN1-217ENST00000556203 MBOAT7Q96N66 472 aa17.2■□□□□ 0.34
ACTN1-217ENST00000556203 NRCAMQ92823 1304 aa17.2■□□□□ 0.34
ACTN1-217ENST00000556203 IGKV6D-21A0A0A0MT36 114 aa17.19■□□□□ 0.34
ACTN1-217ENST00000556203 SLC37A4O43826 429 aa17.19■□□□□ 0.34
ACTN1-217ENST00000556203 GAS7O60861 476 aa17.19■□□□□ 0.34
ACTN1-217ENST00000556203 CKBP12277 381 aa17.19■□□□□ 0.34
ACTN1-217ENST00000556203 SELPP16109 830 aa17.19■□□□□ 0.34
ACTN1-217ENST00000556203 MCM2P49736 904 aa17.19■□□□□ 0.34
ACTN1-217ENST00000556203 RBL2Q08999 1139 aa17.19■□□□□ 0.34
ACTN1-217ENST00000556203 GRIK4Q16099 956 aa17.19■□□□□ 0.34
ACTN1-217ENST00000556203 LRCH2Q5VUJ6 765 aa17.19■□□□□ 0.34
ACTN1-217ENST00000556203 FAM160B1Q5W0V3 765 aa17.19■□□□□ 0.34
ACTN1-217ENST00000556203 LRRC8DQ7L1W4 858 aa17.19■□□□□ 0.34
ACTN1-217ENST00000556203 SMAP1Q8IYB5 467 aaPredicted RBP17.19■□□□□ 0.34
ACTN1-217ENST00000556203 RIT2Q99578 217 aa17.19■□□□□ 0.34
ACTN1-217ENST00000556203 TEKT3Q9BXF9 490 aa17.19■□□□□ 0.34
ACTN1-217ENST00000556203 ZNF302Q9NR11 478 aa17.19■□□□□ 0.34
ACTN1-217ENST00000556203 TRPC6Q9Y210 931 aa17.19■□□□□ 0.34
ACTN1-217ENST00000556203 CCNT1O60563 726 aaKnown RBP17.18■□□□□ 0.34
ACTN1-217ENST00000556203 FGBP02675 491 aa17.18■□□□□ 0.34
ACTN1-217ENST00000556203 PSAPP07602 524 aa17.18■□□□□ 0.34
ACTN1-217ENST00000556203 GCFC2P16383 781 aaKnown RBP17.18■□□□□ 0.34
ACTN1-217ENST00000556203 RFC2P35250 354 aa17.18■□□□□ 0.34
ACTN1-217ENST00000556203 THPOP40225 353 aa17.18■□□□□ 0.34
ACTN1-217ENST00000556203 ADAM17P78536 824 aa17.18■□□□□ 0.34
ACTN1-217ENST00000556203 PLCB4Q15147 1175 aa17.18■□□□□ 0.34
ACTN1-217ENST00000556203 SAFBQ15424 915 aaKnown RBP eCLIP17.18■□□□□ 0.34
ACTN1-217ENST00000556203 ZNF618Q5T7W0 954 aa17.18■□□□□ 0.34
ACTN1-217ENST00000556203 PPP4R3AQ6IN85 833 aa17.18■□□□□ 0.34
ACTN1-217ENST00000556203 SWSAP1Q6NVH7 229 aa17.18■□□□□ 0.34
ACTN1-217ENST00000556203 CCDC60Q8IWA6 550 aaPredicted RBP17.18■□□□□ 0.34
ACTN1-217ENST00000556203 ETNPPLQ8TBG4 499 aa17.18■□□□□ 0.34
ACTN1-217ENST00000556203 VWCEQ96DN2 955 aa17.18■□□□□ 0.34
ACTN1-217ENST00000556203 NAP1L4Q99733 375 aaKnown RBP17.18■□□□□ 0.34
ACTN1-217ENST00000556203 SAMM50Q9Y512 469 aa17.18■□□□□ 0.34
ACTN1-217ENST00000556203 PCDHA10Q9Y5I2 948 aa17.18■□□□□ 0.34
ACTN1-217ENST00000556203 WDR64B1ANS9 1081 aa17.17■□□□□ 0.34
ACTN1-217ENST00000556203 CHMP2AO43633 222 aa17.17■□□□□ 0.34
ACTN1-217ENST00000556203 PFKMP08237 780 aa17.17■□□□□ 0.34
ACTN1-217ENST00000556203 INSRRP14616 1297 aa17.17■□□□□ 0.34
ACTN1-217ENST00000556203 SLC26A2P50443 739 aa17.17■□□□□ 0.34
ACTN1-217ENST00000556203 IGBP1P78318 339 aa17.17■□□□□ 0.34
ACTN1-217ENST00000556203 PDXDC2PQ6P474 469 aa17.17■□□□□ 0.34
ACTN1-217ENST00000556203 OTOP2Q7RTS6 562 aa17.17■□□□□ 0.34
ACTN1-217ENST00000556203 HERVK_113Q902F9 699 aa17.17■□□□□ 0.34
ACTN1-217ENST00000556203 TNPO1Q92973 898 aaKnown RBP17.17■□□□□ 0.34
ACTN1-217ENST00000556203 UNC45AQ9H3U1 944 aa17.17■□□□□ 0.34
ACTN1-217ENST00000556203 POTEB3A0JP26 581 aa17.16■□□□□ 0.34
ACTN1-217ENST00000556203 PSMD10O75832 226 aa17.16■□□□□ 0.34
ACTN1-217ENST00000556203 TRAF7Q6Q0C0 670 aa17.16■□□□□ 0.34
ACTN1-217ENST00000556203 POTEBQ6S5H4 581 aa17.16■□□□□ 0.34
ACTN1-217ENST00000556203 RUFY4Q6ZNE9 571 aa17.16■□□□□ 0.34
ACTN1-217ENST00000556203 FBXO18Q8NFZ0 1043 aa17.16■□□□□ 0.34
ACTN1-217ENST00000556203 FTOQ9C0B1 505 aaKnown RBP eCLIP17.16■□□□□ 0.34
ACTN1-217ENST00000556203 DISC1Q9NRI5 854 aa17.16■□□□□ 0.34
ACTN1-217ENST00000556203 GABBR1Q9UBS5 961 aa17.16■□□□□ 0.34
ACTN1-217ENST00000556203 TUBE1Q9UJT0 475 aa17.16■□□□□ 0.34
ACTN1-217ENST00000556203 MAFBQ9Y5Q3 323 aaPredicted RBP17.16■□□□□ 0.34
ACTN1-217ENST00000556203 MBLAC1A4D2B0 266 aaPredicted RBP17.15■□□□□ 0.34
ACTN1-217ENST00000556203 RRN3P2A6NIE6 340 aa17.15■□□□□ 0.34
ACTN1-217ENST00000556203 NBNO60934 754 aa17.15■□□□□ 0.34
ACTN1-217ENST00000556203 PARNO95453 639 aaKnown RBP17.15■□□□□ 0.34
ACTN1-217ENST00000556203 SFNP31947 248 aa17.15■□□□□ 0.34
ACTN1-217ENST00000556203 JAK3P52333 1124 aa17.15■□□□□ 0.34
ACTN1-217ENST00000556203 GPNMBQ14956 572 aa17.15■□□□□ 0.34
ACTN1-217ENST00000556203 MARCH8Q5T0T0 291 aa17.15■□□□□ 0.34
ACTN1-217ENST00000556203 RASIP1Q5U651 963 aa17.15■□□□□ 0.34
ACTN1-217ENST00000556203 TAF2Q6P1X5 1199 aa17.15■□□□□ 0.34
ACTN1-217ENST00000556203 CKAP2LQ8IYA6 745 aa17.15■□□□□ 0.34
ACTN1-217ENST00000556203 ATP8B4Q8TF62 1192 aa17.15■□□□□ 0.34
ACTN1-217ENST00000556203 ZBTB10Q96DT7 871 aa17.15■□□□□ 0.34
ACTN1-217ENST00000556203 MTIF3Q9H2K0 278 aaKnown RBP17.15■□□□□ 0.34
ACTN1-217ENST00000556203 KCNMB3Q9NPA1 279 aa17.15■□□□□ 0.34
ACTN1-217ENST00000556203 CXXC1Q9P0U4 656 aaPredicted RBP17.15■□□□□ 0.34
ACTN1-217ENST00000556203 LAMA3Q16787 3333 aa17.14■□□□□ 0.33
ACTN1-217ENST00000556203 RSPH10B2B2RC85 870 aa17.14■□□□□ 0.33
ACTN1-217ENST00000556203 MARCH6O60337 910 aa17.14■□□□□ 0.33
ACTN1-217ENST00000556203 HBP1O60381 514 aa17.14■□□□□ 0.33
ACTN1-217ENST00000556203 CAND2O75155 1236 aa17.14■□□□□ 0.33
ACTN1-217ENST00000556203 CTSHP09668 335 aa17.14■□□□□ 0.33
ACTN1-217ENST00000556203 RSPH10BP0C881 870 aa17.14■□□□□ 0.33
ACTN1-217ENST00000556203 ATP4AP20648 1035 aa17.14■□□□□ 0.33
ACTN1-217ENST00000556203 TRMT1LQ7Z2T5 733 aaKnown RBP17.14■□□□□ 0.33
ACTN1-217ENST00000556203 MIER3Q7Z3K6 550 aa17.14■□□□□ 0.33
ACTN1-217ENST00000556203 POTEDQ86YR6 584 aa17.14■□□□□ 0.33
ACTN1-217ENST00000556203 TRAPPC12Q8WVT3 735 aa17.14■□□□□ 0.33
ACTN1-217ENST00000556203 FAM20AQ96MK3 541 aa17.14■□□□□ 0.33
ACTN1-217ENST00000556203 FOXP1Q9H334 677 aaPredicted RBP17.14■□□□□ 0.33
ACTN1-217ENST00000556203 IGSF9BQ9UPX0 1349 aa17.14■□□□□ 0.33
ACTN1-217ENST00000556203 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.13■□□□□ 0.33
ACTN1-217ENST00000556203 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.13■□□□□ 0.33
ACTN1-217ENST00000556203 ZBBXA8MT70 800 aa17.13■□□□□ 0.33
ACTN1-217ENST00000556203 RBAK-RBAKDNI3L0D1 243 aa17.13■□□□□ 0.33
ACTN1-217ENST00000556203 WNT7AO00755 349 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms