RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 CXCL17Q6UXB2 119 aa8.58□□□□□ -1.04
TDP1-214ENST00000556063 ABHD15Q6UXT9 468 aa8.58□□□□□ -1.04
TDP1-214ENST00000556063 PLPPR4Q7Z2D5 763 aa8.58□□□□□ -1.04
TDP1-214ENST00000556063 NECAB2Q7Z6G3 386 aa8.58□□□□□ -1.04
TDP1-214ENST00000556063 CKAP2LQ8IYA6 745 aa8.58□□□□□ -1.04
TDP1-214ENST00000556063 KRI1Q8N9T8 703 aaKnown RBP8.58□□□□□ -1.04
TDP1-214ENST00000556063 LINC00301Q8NCQ3 95 aa8.58□□□□□ -1.04
TDP1-214ENST00000556063 GJA10Q969M2 543 aa8.58□□□□□ -1.04
TDP1-214ENST00000556063 AK8Q96MA6 479 aa8.58□□□□□ -1.04
TDP1-214ENST00000556063 UNC45AQ9H3U1 944 aa8.58□□□□□ -1.04
TDP1-214ENST00000556063 TUT1Q9H6E5 874 aaKnown RBP8.58□□□□□ -1.04
TDP1-214ENST00000556063 STARD7Q9NQZ5 370 aa8.58□□□□□ -1.04
TDP1-214ENST00000556063 ZNF302Q9NR11 478 aa8.58□□□□□ -1.04
TDP1-214ENST00000556063 ERAP1Q9NZ08 941 aa8.58□□□□□ -1.04
TDP1-214ENST00000556063 LRWD1Q9UFC0 647 aa8.58□□□□□ -1.04
TDP1-214ENST00000556063 VAV3Q9UKW4 847 aa8.58□□□□□ -1.04
TDP1-214ENST00000556063 CLIC4Q9Y696 253 aa8.58□□□□□ -1.04
TDP1-214ENST00000556063 IGKV6D-21A0A0A0MT36 114 aa8.57□□□□□ -1.04
TDP1-214ENST00000556063 POTEFA5A3E0 1075 aa8.57□□□□□ -1.04
TDP1-214ENST00000556063 SLC26A4O43511 780 aa8.57□□□□□ -1.04
TDP1-214ENST00000556063 F2P00734 622 aa8.57□□□□□ -1.04
TDP1-214ENST00000556063 P4HBP07237 508 aaKnown RBP8.57□□□□□ -1.04
TDP1-214ENST00000556063 MUTP22033 750 aa8.57□□□□□ -1.04
TDP1-214ENST00000556063 PTGS1P23219 599 aa8.57□□□□□ -1.04
TDP1-214ENST00000556063 MARCKSP29966 332 aaPredicted RBP8.57□□□□□ -1.04
TDP1-214ENST00000556063 UBA7P41226 1012 aa8.57□□□□□ -1.04
TDP1-214ENST00000556063 QARSP47897 775 aaKnown RBP8.57□□□□□ -1.04
TDP1-214ENST00000556063 ME1P48163 572 aa8.57□□□□□ -1.04
TDP1-214ENST00000556063 PSEN2P49810 448 aa8.57□□□□□ -1.04
TDP1-214ENST00000556063 PSMC5P62195 406 aa8.57□□□□□ -1.04
TDP1-214ENST00000556063 SPIRE1Q08AE8 756 aa8.57□□□□□ -1.04
TDP1-214ENST00000556063 MFSD10Q14728 455 aa8.57□□□□□ -1.04
TDP1-214ENST00000556063 CCSAPQ6IQ19 270 aaPredicted RBP8.57□□□□□ -1.04
TDP1-214ENST00000556063 SWSAP1Q6NVH7 229 aa8.57□□□□□ -1.04
TDP1-214ENST00000556063 B3GNT9Q6UX72 402 aa8.57□□□□□ -1.04
TDP1-214ENST00000556063 KCTD17Q8N5Z5 321 aa8.57□□□□□ -1.04
TDP1-214ENST00000556063 IGSF22Q8N9C0 903 aa8.57□□□□□ -1.04
TDP1-214ENST00000556063 AFAP1L1Q8TED9 768 aa8.57□□□□□ -1.04
TDP1-214ENST00000556063 CDK5RAP3Q96JB5 506 aa8.57□□□□□ -1.04
TDP1-214ENST00000556063 FAM167AQ96KS9 214 aa8.57□□□□□ -1.04
TDP1-214ENST00000556063 SPATA32Q96LK8 384 aa8.57□□□□□ -1.04
TDP1-214ENST00000556063 C11orf49Q9H6J7 331 aa8.57□□□□□ -1.04
TDP1-214ENST00000556063 BCAS3Q9H6U6 928 aa8.57□□□□□ -1.04
TDP1-214ENST00000556063 ZSWIM4Q9H7M6 989 aa8.57□□□□□ -1.04
TDP1-214ENST00000556063 TUFT1Q9NNX1 390 aa8.57□□□□□ -1.04
TDP1-214ENST00000556063 NRBP2Q9NSY0 501 aa8.57□□□□□ -1.04
TDP1-214ENST00000556063 GABBR1Q9UBS5 961 aa8.57□□□□□ -1.04
TDP1-214ENST00000556063 RCOR1Q9UKL0 485 aa8.57□□□□□ -1.04
TDP1-214ENST00000556063 SRPRBQ9Y5M8 271 aaKnown RBP8.57□□□□□ -1.04
TDP1-214ENST00000556063 KDM3AQ9Y4C1 1321 aa8.56□□□□□ -1.04
TDP1-214ENST00000556063 WDR81Q562E7 1941 aa8.56□□□□□ -1.04
TDP1-214ENST00000556063 SCN10AQ9Y5Y9 1956 aa8.56□□□□□ -1.04
TDP1-214ENST00000556063 A0A0U1RQG5 324 aaPredicted RBP8.56□□□□□ -1.04
TDP1-214ENST00000556063 A0A1W2PQ45 241 aaPredicted RBP8.56□□□□□ -1.04
TDP1-214ENST00000556063 A0A1W2PQY0 241 aa8.56□□□□□ -1.04
TDP1-214ENST00000556063 GOLGA6L4A6NEF3 574 aa8.56□□□□□ -1.04
TDP1-214ENST00000556063 POTEMA6NI47 508 aa8.56□□□□□ -1.04
TDP1-214ENST00000556063 EML1O00423 815 aa8.56□□□□□ -1.04
TDP1-214ENST00000556063 HBP1O60381 514 aa8.56□□□□□ -1.04
TDP1-214ENST00000556063 CUTAO60888 179 aa8.56□□□□□ -1.04
TDP1-214ENST00000556063 ZNF286BP0CG31 522 aa8.56□□□□□ -1.04
TDP1-214ENST00000556063 GNAT1P11488 350 aa8.56□□□□□ -1.04
TDP1-214ENST00000556063 EN2P19622 333 aaPredicted RBP8.56□□□□□ -1.04
TDP1-214ENST00000556063 CCT6AP40227 531 aaKnown RBP8.56□□□□□ -1.04
TDP1-214ENST00000556063 CHMP4BP1P59074 171 aa8.56□□□□□ -1.04
TDP1-214ENST00000556063 PTPN11Q06124 597 aaPredicted RBP8.56□□□□□ -1.04
TDP1-214ENST00000556063 ITGA7Q13683 1181 aa8.56□□□□□ -1.04
TDP1-214ENST00000556063 KIAA0753Q2KHM9 967 aa8.56□□□□□ -1.04
TDP1-214ENST00000556063 XKR3Q5GH77 459 aa8.56□□□□□ -1.04
TDP1-214ENST00000556063 FAM47CQ5HY64 1035 aa8.56□□□□□ -1.04
TDP1-214ENST00000556063 NFRKBQ6P4R8 1299 aa8.56□□□□□ -1.04
TDP1-214ENST00000556063 OTUD6AQ7L8S5 288 aa8.56□□□□□ -1.04
TDP1-214ENST00000556063 CCDC60Q8IWA6 550 aaPredicted RBP8.56□□□□□ -1.04
TDP1-214ENST00000556063 TPH2Q8IWU9 490 aa8.56□□□□□ -1.04
TDP1-214ENST00000556063 C7orf31Q8N865 590 aa8.56□□□□□ -1.04
TDP1-214ENST00000556063 ZNF579Q8NAF0 562 aaKnown RBP8.56□□□□□ -1.04
TDP1-214ENST00000556063 RASSF8Q8NHQ8 419 aa8.56□□□□□ -1.04
TDP1-214ENST00000556063 SNX29Q8TEQ0 813 aa8.56□□□□□ -1.04
TDP1-214ENST00000556063 LEO1Q8WVC0 666 aaPredicted RBP8.56□□□□□ -1.04
TDP1-214ENST00000556063 BBXQ8WY36 941 aaPredicted RBP8.56□□□□□ -1.04
TDP1-214ENST00000556063 CALML4Q96GE6 196 aa8.56□□□□□ -1.04
TDP1-214ENST00000556063 PAWRQ96IZ0 340 aaKnown RBP8.56□□□□□ -1.04
TDP1-214ENST00000556063 CCDC43Q96MW1 224 aaKnown RBP8.56□□□□□ -1.04
TDP1-214ENST00000556063 EIF2AK1Q9BQI3 630 aaKnown RBP8.56□□□□□ -1.04
TDP1-214ENST00000556063 C16orf70Q9BSU1 422 aa8.56□□□□□ -1.04
TDP1-214ENST00000556063 POLR3CQ9BUI4 534 aaPredicted RBP8.56□□□□□ -1.04
TDP1-214ENST00000556063 FTOQ9C0B1 505 aaKnown RBP eCLIP8.56□□□□□ -1.04
TDP1-214ENST00000556063 SENP6Q9GZR1 1112 aaPredicted RBP8.56□□□□□ -1.04
TDP1-214ENST00000556063 CCDC39Q9UFE4 941 aa8.56□□□□□ -1.04
TDP1-214ENST00000556063 TRPC6Q9Y210 931 aa8.56□□□□□ -1.04
TDP1-214ENST00000556063 MAFBQ9Y5Q3 323 aaPredicted RBP8.56□□□□□ -1.04
TDP1-214ENST00000556063 MROH7Q68CQ1 1323 aa8.55□□□□□ -1.04
TDP1-214ENST00000556063 IGSF9BQ9UPX0 1349 aa8.55□□□□□ -1.04
TDP1-214ENST00000556063 POTEB3A0JP26 581 aa8.55□□□□□ -1.04
TDP1-214ENST00000556063 RRN3P2A6NIE6 340 aa8.55□□□□□ -1.04
TDP1-214ENST00000556063 HAS3O00219 553 aa8.55□□□□□ -1.04
TDP1-214ENST00000556063 TLR3O15455 904 aaKnown RBP8.55□□□□□ -1.04
TDP1-214ENST00000556063 XRCC6P12956 609 aaKnown RBP eCLIP8.55□□□□□ -1.04
TDP1-214ENST00000556063 MARK3P27448 753 aa8.55□□□□□ -1.04
TDP1-214ENST00000556063 RPA1P27694 616 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms