RNA–Protein interactions for RNA: ENST00000555943.1

SUPT16H-204, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2 BASIC

Gene SUPT16H, Length 915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-204ENST00000555943 ALDH8A1Q9H2A2 487 aaPredicted RBP8.86□□□□□ -0.99
SUPT16H-204ENST00000555943 IL17RBQ9NRM6 502 aa8.86□□□□□ -0.99
SUPT16H-204ENST00000555943 FRRS1LQ9P0K9 344 aa8.86□□□□□ -0.99
SUPT16H-204ENST00000555943 ISY1Q9ULR0 285 aaKnown RBP8.86□□□□□ -0.99
SUPT16H-204ENST00000555943 TRIM17Q9Y577 477 aa8.86□□□□□ -0.99
SUPT16H-204ENST00000555943 IGKV6D-41A0A0C4DH26 115 aa8.85□□□□□ -0.99
SUPT16H-204ENST00000555943 KLF18A0A0U1RQI7 1052 aa8.85□□□□□ -0.99
SUPT16H-204ENST00000555943 METTL12A8MUP2 240 aa8.85□□□□□ -0.99
SUPT16H-204ENST00000555943 CELA2BP08218 269 aaPredicted RBP8.85□□□□□ -0.99
SUPT16H-204ENST00000555943 CTSHP09668 335 aa8.85□□□□□ -0.99
SUPT16H-204ENST00000555943 CALM1P0DP23 149 aa8.85□□□□□ -0.99
SUPT16H-204ENST00000555943 CALM2P0DP24 149 aa8.85□□□□□ -0.99
SUPT16H-204ENST00000555943 CALM3P0DP25 149 aa8.85□□□□□ -0.99
SUPT16H-204ENST00000555943 BCRP11274 1271 aa8.85□□□□□ -0.99
SUPT16H-204ENST00000555943 CETPP11597 493 aa8.85□□□□□ -0.99
SUPT16H-204ENST00000555943 GUCY1A2P33402 732 aa8.85□□□□□ -0.99
SUPT16H-204ENST00000555943 USP14P54578 494 aa8.85□□□□□ -0.99
SUPT16H-204ENST00000555943 JAG1P78504 1218 aa8.85□□□□□ -0.99
SUPT16H-204ENST00000555943 PPATQ06203 517 aa8.85□□□□□ -0.99
SUPT16H-204ENST00000555943 APOBRQ0VD83 1088 aa8.85□□□□□ -0.99
SUPT16H-204ENST00000555943 SPP2Q13103 211 aa8.85□□□□□ -0.99
SUPT16H-204ENST00000555943 CRHR2Q13324 411 aa8.85□□□□□ -0.99
SUPT16H-204ENST00000555943 SEC23AQ15436 765 aa8.85□□□□□ -0.99
SUPT16H-204ENST00000555943 SHROOM1Q2M3G4 852 aaPredicted RBP8.85□□□□□ -0.99
SUPT16H-204ENST00000555943 TSNAXIP1Q2TAA8 658 aa8.85□□□□□ -0.99
SUPT16H-204ENST00000555943 CEP135Q66GS9 1140 aa8.85□□□□□ -0.99
SUPT16H-204ENST00000555943 OTOP1Q7RTM1 612 aa8.85□□□□□ -0.99
SUPT16H-204ENST00000555943 CLEC10AQ8IUN9 316 aa8.85□□□□□ -0.99
SUPT16H-204ENST00000555943 HSCBQ8IWL3 235 aa8.85□□□□□ -0.99
SUPT16H-204ENST00000555943 MICALL1Q8N3F8 863 aa8.85□□□□□ -0.99
SUPT16H-204ENST00000555943 WHAMMQ8TF30 809 aa8.85□□□□□ -0.99
SUPT16H-204ENST00000555943 NUP133Q8WUM0 1156 aa8.85□□□□□ -0.99
SUPT16H-204ENST00000555943 ANKS1AQ92625 1134 aa8.85□□□□□ -0.99
SUPT16H-204ENST00000555943 POP1Q99575 1024 aaKnown RBP8.85□□□□□ -0.99
SUPT16H-204ENST00000555943 TMEM47Q9BQJ4 181 aa8.85□□□□□ -0.99
SUPT16H-204ENST00000555943 BHLHE41Q9C0J9 482 aaPredicted RBP8.85□□□□□ -0.99
SUPT16H-204ENST00000555943 R3HDMLQ9H3Y0 253 aa8.85□□□□□ -0.99
SUPT16H-204ENST00000555943 LY9Q9HBG7 655 aa8.85□□□□□ -0.99
SUPT16H-204ENST00000555943 ABCB6Q9NP58 842 aa8.85□□□□□ -0.99
SUPT16H-204ENST00000555943 FAM8A1Q9UBU6 413 aa8.85□□□□□ -0.99
SUPT16H-204ENST00000555943 LIMCH1Q9UPQ0 1083 aa8.85□□□□□ -0.99
SUPT16H-204ENST00000555943 SNCAIPQ9Y6H5 919 aa8.85□□□□□ -0.99
SUPT16H-204ENST00000555943 RBBP6Q7Z6E9 1792 aaKnown RBP8.85□□□□□ -0.99
SUPT16H-204ENST00000555943 LAMA4Q16363 1823 aa8.84□□□□□ -0.99
SUPT16H-204ENST00000555943 CENPFP49454 3210 aa8.84□□□□□ -0.99
SUPT16H-204ENST00000555943 HTTP42858 3142 aa8.84□□□□□ -0.99
SUPT16H-204ENST00000555943 CCL15-CCL14A0A0B4J2E2 113 aa8.84□□□□□ -0.99
SUPT16H-204ENST00000555943 TMEM238LA0A1B0GVL6 79 aa8.84□□□□□ -0.99
SUPT16H-204ENST00000555943 TRIM75PA6NK02 468 aa8.84□□□□□ -0.99
SUPT16H-204ENST00000555943 SHISA8B8ZZ34 492 aa8.84□□□□□ -0.99
SUPT16H-204ENST00000555943 C19orf81C9J6K1 198 aa8.84□□□□□ -0.99
SUPT16H-204ENST00000555943 ZBTB43O43298 467 aa8.84□□□□□ -0.99
SUPT16H-204ENST00000555943 SMNDC1O75940 238 aaKnown RBP eCLIP8.84□□□□□ -0.99
SUPT16H-204ENST00000555943 DDAH1O94760 285 aa8.84□□□□□ -0.99
SUPT16H-204ENST00000555943 ALBP02768 609 aa8.84□□□□□ -0.99
SUPT16H-204ENST00000555943 USP17L7P0C7H9 530 aa8.84□□□□□ -0.99
SUPT16H-204ENST00000555943 GRIA4P48058 902 aa8.84□□□□□ -0.99
SUPT16H-204ENST00000555943 PPIL2Q13356 520 aa8.84□□□□□ -0.99
SUPT16H-204ENST00000555943 SNAPC2Q13487 334 aa8.84□□□□□ -0.99
SUPT16H-204ENST00000555943 COL9A3Q14050 684 aaPredicted RBP8.84□□□□□ -0.99
SUPT16H-204ENST00000555943 TOB2Q14106 344 aaPredicted RBP8.84□□□□□ -0.99
SUPT16H-204ENST00000555943 BECN1Q14457 450 aa8.84□□□□□ -0.99
SUPT16H-204ENST00000555943 TAF1CQ15572 869 aaPredicted RBP8.84□□□□□ -0.99
SUPT16H-204ENST00000555943 ZYXQ15942 572 aaKnown RBP8.84□□□□□ -0.99
SUPT16H-204ENST00000555943 CCL15Q16663 113 aa8.84□□□□□ -0.99
SUPT16H-204ENST00000555943 RCSD1Q6JBY9 416 aa8.84□□□□□ -0.99
SUPT16H-204ENST00000555943 ADAMTSL4Q6UY14 1074 aa8.84□□□□□ -0.99
SUPT16H-204ENST00000555943 C20orf204Q6ZNR8 217 aa8.84□□□□□ -0.99
SUPT16H-204ENST00000555943 CCDC84Q86UT8 332 aaPredicted RBP8.84□□□□□ -0.99
SUPT16H-204ENST00000555943 SGMS1Q86VZ5 419 aa8.84□□□□□ -0.99
SUPT16H-204ENST00000555943 ZNF654Q8IZM8 581 aa8.84□□□□□ -0.99
SUPT16H-204ENST00000555943 LRRC47Q8N1G4 583 aaKnown RBP8.84□□□□□ -0.99
SUPT16H-204ENST00000555943 FBXL16Q8N461 479 aa8.84□□□□□ -0.99
SUPT16H-204ENST00000555943 NUDT8Q8WV74 236 aa8.84□□□□□ -0.99
SUPT16H-204ENST00000555943 MKL1Q969V6 931 aa8.84□□□□□ -0.99
SUPT16H-204ENST00000555943 CHMP4CQ96CF2 233 aa8.84□□□□□ -0.99
SUPT16H-204ENST00000555943 ZSCAN31Q96LW9 406 aaPredicted RBP8.84□□□□□ -0.99
SUPT16H-204ENST00000555943 PTPN18Q99952 460 aa8.84□□□□□ -0.99
SUPT16H-204ENST00000555943 WDR18Q9BV38 432 aa8.84□□□□□ -0.99
SUPT16H-204ENST00000555943 SLKQ9H2G2 1235 aaPredicted RBP8.84□□□□□ -0.99
SUPT16H-204ENST00000555943 TMOD4Q9NZQ9 345 aa8.84□□□□□ -0.99
SUPT16H-204ENST00000555943 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.84□□□□□ -0.99
SUPT16H-204ENST00000555943 SYNPO2Q9UMS6 1093 aa8.84□□□□□ -0.99
SUPT16H-204ENST00000555943 PTPN22Q9Y2R2 807 aa8.84□□□□□ -0.99
SUPT16H-204ENST00000555943 GOLGA8AA7E2F4 631 aa8.83□□□□□ -1
SUPT16H-204ENST00000555943 GOLGA8BA8MQT2 603 aa8.83□□□□□ -1
SUPT16H-204ENST00000555943 F5H6K3 240 aa8.83□□□□□ -1
SUPT16H-204ENST00000555943 PARP1P09874 1014 aaKnown RBP8.83□□□□□ -1
SUPT16H-204ENST00000555943 KIF5BP33176 963 aa8.83□□□□□ -1
SUPT16H-204ENST00000555943 SLC1A4P43007 532 aa8.83□□□□□ -1
SUPT16H-204ENST00000555943 NOVP48745 357 aa8.83□□□□□ -1
SUPT16H-204ENST00000555943 METAP2P50579 478 aaKnown RBP eCLIP8.83□□□□□ -1
SUPT16H-204ENST00000555943 FCGRTP55899 365 aa8.83□□□□□ -1
SUPT16H-204ENST00000555943 BACE1P56817 501 aa8.83□□□□□ -1
SUPT16H-204ENST00000555943 KLRC3Q07444 240 aa8.83□□□□□ -1
SUPT16H-204ENST00000555943 STK3Q13188 491 aa8.83□□□□□ -1
SUPT16H-204ENST00000555943 KIF22Q14807 665 aa8.83□□□□□ -1
SUPT16H-204ENST00000555943 CCDC96Q2M329 555 aa8.83□□□□□ -1
SUPT16H-204ENST00000555943 SPRED3Q2MJR0 410 aa8.83□□□□□ -1
SUPT16H-204ENST00000555943 SLFN13Q68D06 897 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms