RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 DYDC2Q96IM9 177 aa12.36□□□□□ -0.43
TMEM260-208ENST00000555905 SPATA33Q96N06 139 aa12.36□□□□□ -0.43
TMEM260-208ENST00000555905 PLIN2Q99541 437 aa12.36□□□□□ -0.43
TMEM260-208ENST00000555905 HSD17B14Q9BPX1 270 aa12.36□□□□□ -0.43
TMEM260-208ENST00000555905 NUP62CLQ9H1M0 184 aa12.36□□□□□ -0.43
TMEM260-208ENST00000555905 CUEDC2Q9H467 287 aa12.36□□□□□ -0.43
TMEM260-208ENST00000555905 CLSTN2Q9H4D0 955 aa12.36□□□□□ -0.43
TMEM260-208ENST00000555905 STK17AQ9UEE5 414 aa12.36□□□□□ -0.43
TMEM260-208ENST00000555905 FAM184BQ9ULE4 1060 aa12.36□□□□□ -0.43
TMEM260-208ENST00000555905 TRIM17Q9Y577 477 aa12.36□□□□□ -0.43
TMEM260-208ENST00000555905 POTEB3A0JP26 581 aa12.35□□□□□ -0.43
TMEM260-208ENST00000555905 ACTN4O43707 911 aaKnown RBP12.35□□□□□ -0.43
TMEM260-208ENST00000555905 DKC1O60832 514 aaKnown RBP eCLIP12.35□□□□□ -0.43
TMEM260-208ENST00000555905 SLITRK3O94933 977 aa12.35□□□□□ -0.43
TMEM260-208ENST00000555905 HMGCRP04035 888 aa12.35□□□□□ -0.43
TMEM260-208ENST00000555905 SLFN14P0C7P3 912 aa12.35□□□□□ -0.43
TMEM260-208ENST00000555905 SUPT20HL2P0C7V6 817 aa12.35□□□□□ -0.43
TMEM260-208ENST00000555905 SPATA31C1P0DKV0 1188 aa12.35□□□□□ -0.43
TMEM260-208ENST00000555905 ELNP15502 786 aa12.35□□□□□ -0.43
TMEM260-208ENST00000555905 SMPD1P17405 629 aa12.35□□□□□ -0.43
TMEM260-208ENST00000555905 QARSP47897 775 aaKnown RBP12.35□□□□□ -0.43
TMEM260-208ENST00000555905 CYP4A11Q02928 519 aa12.35□□□□□ -0.43
TMEM260-208ENST00000555905 GRB10Q13322 594 aa12.35□□□□□ -0.43
TMEM260-208ENST00000555905 LONRF3Q496Y0 759 aa12.35□□□□□ -0.43
TMEM260-208ENST00000555905 TMEM119Q4V9L6 283 aa12.35□□□□□ -0.43
TMEM260-208ENST00000555905 POTEBQ6S5H4 581 aa12.35□□□□□ -0.43
TMEM260-208ENST00000555905 KRBA2Q6ZNG9 492 aa12.35□□□□□ -0.43
TMEM260-208ENST00000555905 SLAIN1Q8ND83 568 aa12.35□□□□□ -0.43
TMEM260-208ENST00000555905 BANK1Q8NDB2 785 aa12.35□□□□□ -0.43
TMEM260-208ENST00000555905 SEPT1Q8WYJ6 367 aa12.35□□□□□ -0.43
TMEM260-208ENST00000555905 ATP6V0A1Q93050 837 aa12.35□□□□□ -0.43
TMEM260-208ENST00000555905 EMID1Q96A84 441 aaPredicted RBP12.35□□□□□ -0.43
TMEM260-208ENST00000555905 MS4A3Q96HJ5 214 aa12.35□□□□□ -0.43
TMEM260-208ENST00000555905 PNMA5Q96PV4 448 aa12.35□□□□□ -0.43
TMEM260-208ENST00000555905 LXNQ9BS40 222 aa12.35□□□□□ -0.43
TMEM260-208ENST00000555905 TNMDQ9H2S6 317 aa12.35□□□□□ -0.43
TMEM260-208ENST00000555905 BCAS3Q9H6U6 928 aa12.35□□□□□ -0.43
TMEM260-208ENST00000555905 ZSWIM4Q9H7M6 989 aa12.35□□□□□ -0.43
TMEM260-208ENST00000555905 MAGEF1Q9HAY2 307 aa12.35□□□□□ -0.43
TMEM260-208ENST00000555905 RGL1Q9NZL6 768 aa12.35□□□□□ -0.43
TMEM260-208ENST00000555905 SERTAD1Q9UHV2 236 aa12.35□□□□□ -0.43
TMEM260-208ENST00000555905 KIAA1024Q9UPX6 916 aa12.35□□□□□ -0.43
TMEM260-208ENST00000555905 DNM3Q9UQ16 869 aa12.35□□□□□ -0.43
TMEM260-208ENST00000555905 WDR81Q562E7 1941 aa12.35□□□□□ -0.43
TMEM260-208ENST00000555905 LOXHD1Q8IVV2 1947 aa12.35□□□□□ -0.43
TMEM260-208ENST00000555905 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.34□□□□□ -0.43
TMEM260-208ENST00000555905 POTEFA5A3E0 1075 aa12.34□□□□□ -0.43
TMEM260-208ENST00000555905 BACH1O14867 736 aa12.34□□□□□ -0.43
TMEM260-208ENST00000555905 CTAGE5O15320 804 aa12.34□□□□□ -0.43
TMEM260-208ENST00000555905 LETM1O95202 739 aaPredicted RBP12.34□□□□□ -0.43
TMEM260-208ENST00000555905 ATG7O95352 703 aa12.34□□□□□ -0.43
TMEM260-208ENST00000555905 CYBAP13498 195 aa12.34□□□□□ -0.43
TMEM260-208ENST00000555905 AKR1A1P14550 325 aa12.34□□□□□ -0.43
TMEM260-208ENST00000555905 CNGA1P29973 690 aa12.34□□□□□ -0.43
TMEM260-208ENST00000555905 PSMC5P62195 406 aa12.34□□□□□ -0.43
TMEM260-208ENST00000555905 ARHGAP1Q07960 439 aa12.34□□□□□ -0.43
TMEM260-208ENST00000555905 CACNB2Q08289 660 aaPredicted RBP12.34□□□□□ -0.43
TMEM260-208ENST00000555905 CTTNQ14247 550 aaKnown RBP12.34□□□□□ -0.43
TMEM260-208ENST00000555905 GSE1Q14687 1217 aa12.34□□□□□ -0.43
TMEM260-208ENST00000555905 E2F4Q16254 413 aa12.34□□□□□ -0.43
TMEM260-208ENST00000555905 CAMK4Q16566 473 aa12.34□□□□□ -0.43
TMEM260-208ENST00000555905 FAM160B1Q5W0V3 765 aa12.34□□□□□ -0.43
TMEM260-208ENST00000555905 POTEGQ6S5H5 508 aa12.34□□□□□ -0.43
TMEM260-208ENST00000555905 ABHD15Q6UXT9 468 aa12.34□□□□□ -0.43
TMEM260-208ENST00000555905 OR6J1Q8NGC5 347 aa12.34□□□□□ -0.43
TMEM260-208ENST00000555905 PPTC7Q8NI37 304 aa12.34□□□□□ -0.43
TMEM260-208ENST00000555905 COPS5Q92905 334 aa12.34□□□□□ -0.43
TMEM260-208ENST00000555905 NACC1Q96RE7 527 aa12.34□□□□□ -0.43
TMEM260-208ENST00000555905 GPR20Q99678 358 aa12.34□□□□□ -0.43
TMEM260-208ENST00000555905 ANP32EQ9BTT0 268 aa12.34□□□□□ -0.43
TMEM260-208ENST00000555905 AP5M1Q9H0R1 490 aa12.34□□□□□ -0.43
TMEM260-208ENST00000555905 MYH9P35579 1960 aaKnown RBP12.34□□□□□ -0.43
TMEM260-208ENST00000555905 GSTTP1A0A1W2PQM5 241 aa12.33□□□□□ -0.44
TMEM260-208ENST00000555905 MAP3K13O43283 966 aa12.33□□□□□ -0.44
TMEM260-208ENST00000555905 TCF7P36402 384 aaPredicted RBP12.33□□□□□ -0.44
TMEM260-208ENST00000555905 AMPD3Q01432 767 aa12.33□□□□□ -0.44
TMEM260-208ENST00000555905 ECM1Q16610 540 aa12.33□□□□□ -0.44
TMEM260-208ENST00000555905 TMEM63BQ5T3F8 832 aa12.33□□□□□ -0.44
TMEM260-208ENST00000555905 GJC2Q5T442 439 aaPredicted RBP12.33□□□□□ -0.44
TMEM260-208ENST00000555905 SWSAP1Q6NVH7 229 aa12.33□□□□□ -0.44
TMEM260-208ENST00000555905 PDXDC2PQ6P474 469 aa12.33□□□□□ -0.44
TMEM260-208ENST00000555905 SV2BQ7L1I2 683 aa12.33□□□□□ -0.44
TMEM260-208ENST00000555905 ELOA2Q8IYF1 753 aaPredicted RBP12.33□□□□□ -0.44
TMEM260-208ENST00000555905 LARP4BQ92615 738 aaKnown RBP12.33□□□□□ -0.44
TMEM260-208ENST00000555905 RAD54LQ92698 747 aa12.33□□□□□ -0.44
TMEM260-208ENST00000555905 LRRC27Q9C0I9 530 aa12.33□□□□□ -0.44
TMEM260-208ENST00000555905 AZI2Q9H6S1 392 aa12.33□□□□□ -0.44
TMEM260-208ENST00000555905 ZNF302Q9NR11 478 aa12.33□□□□□ -0.44
TMEM260-208ENST00000555905 TMEM63CQ9P1W3 806 aa12.33□□□□□ -0.44
TMEM260-208ENST00000555905 GABBR1Q9UBS5 961 aa12.33□□□□□ -0.44
TMEM260-208ENST00000555905 Q9Y3F1 56 aa12.33□□□□□ -0.44
TMEM260-208ENST00000555905 CEP350Q5VT06 3117 aa12.33□□□□□ -0.44
TMEM260-208ENST00000555905 SEPT4O43236 478 aa12.32□□□□□ -0.44
TMEM260-208ENST00000555905 DYNC1LI2O43237 492 aaPredicted RBP12.32□□□□□ -0.44
TMEM260-208ENST00000555905 DUSP11O75319 330 aaKnown RBP12.32□□□□□ -0.44
TMEM260-208ENST00000555905 LYPLA2O95372 231 aa12.32□□□□□ -0.44
TMEM260-208ENST00000555905 HSPA8P11142 646 aaKnown RBP12.32□□□□□ -0.44
TMEM260-208ENST00000555905 GRK4P32298 578 aa12.32□□□□□ -0.44
TMEM260-208ENST00000555905 CTCFP49711 727 aaPredicted RBP12.32□□□□□ -0.44
TMEM260-208ENST00000555905 TRIM32Q13049 653 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms