RNA–Protein interactions for RNA: ENST00000555816.5

ATXN3-233, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-233ENST00000555816 FHOD1Q9Y613 1164 aa6.68□□□□□ -1.34
ATXN3-233ENST00000555816 WASHC2AQ641Q2 1341 aa6.68□□□□□ -1.34
ATXN3-233ENST00000555816 MON2Q7Z3U7 1717 aa6.67□□□□□ -1.34
ATXN3-233ENST00000555816 DOT1LQ8TEK3 1739 aa6.67□□□□□ -1.34
ATXN3-233ENST00000555816 A0A1W2PQJ5 194 aa6.67□□□□□ -1.34
ATXN3-233ENST00000555816 SHOXO15266 292 aa6.67□□□□□ -1.34
ATXN3-233ENST00000555816 ACRP10323 421 aa6.67□□□□□ -1.34
ATXN3-233ENST00000555816 CTCFP49711 727 aaPredicted RBP6.67□□□□□ -1.34
ATXN3-233ENST00000555816 KIR3DS1Q14943 382 aa6.67□□□□□ -1.34
ATXN3-233ENST00000555816 PLEKHN1Q494U1 663 aaPredicted RBP6.67□□□□□ -1.34
ATXN3-233ENST00000555816 TTLL6Q8N841 843 aa6.67□□□□□ -1.34
ATXN3-233ENST00000555816 RNF38Q9H0F5 515 aa6.67□□□□□ -1.34
ATXN3-233ENST00000555816 METTL5Q9NRN9 209 aaKnown RBP6.67□□□□□ -1.34
ATXN3-233ENST00000555816 SRP68Q9UHB9 627 aaKnown RBP6.67□□□□□ -1.34
ATXN3-233ENST00000555816 CNOT11Q9UKZ1 510 aaKnown RBP6.67□□□□□ -1.34
ATXN3-233ENST00000555816 DIS3Q9Y2L1 958 aaKnown RBP6.67□□□□□ -1.34
ATXN3-233ENST00000555816 FAM208AQ9UK61 1670 aaKnown RBP6.67□□□□□ -1.34
ATXN3-233ENST00000555816 LTN1O94822 1766 aa6.67□□□□□ -1.34
ATXN3-233ENST00000555816 C5P01031 1676 aa6.66□□□□□ -1.34
ATXN3-233ENST00000555816 POLRMTO00411 1230 aaKnown RBP6.66□□□□□ -1.34
ATXN3-233ENST00000555816 FOXN1O15353 648 aa6.66□□□□□ -1.34
ATXN3-233ENST00000555816 FGF10O15520 208 aaPredicted RBP6.66□□□□□ -1.34
ATXN3-233ENST00000555816 CD247P20963 164 aa6.66□□□□□ -1.34
ATXN3-233ENST00000555816 VAMP1P23763 118 aa6.66□□□□□ -1.34
ATXN3-233ENST00000555816 CRKLP46109 303 aaKnown RBP6.66□□□□□ -1.34
ATXN3-233ENST00000555816 POU4F1Q01851 419 aa6.66□□□□□ -1.34
ATXN3-233ENST00000555816 COL9A2Q14055 689 aaPredicted RBP6.66□□□□□ -1.34
ATXN3-233ENST00000555816 PLEKHO1Q53GL0 409 aaPredicted RBP6.66□□□□□ -1.34
ATXN3-233ENST00000555816 TMEM87AQ8NBN3 555 aa6.66□□□□□ -1.34
ATXN3-233ENST00000555816 RNF34Q969K3 372 aa6.66□□□□□ -1.34
ATXN3-233ENST00000555816 GP6Q9HCN6 339 aa6.66□□□□□ -1.34
ATXN3-233ENST00000555816 USP42Q9H9J4 1324 aaKnown RBP6.66□□□□□ -1.34
ATXN3-233ENST00000555816 KDRP35968 1356 aa6.66□□□□□ -1.34
ATXN3-233ENST00000555816 WDR90Q96KV7 1748 aa6.65□□□□□ -1.34
ATXN3-233ENST00000555816 C9IYK1 514 aa6.65□□□□□ -1.34
ATXN3-233ENST00000555816 H0YIN7 160 aa6.65□□□□□ -1.34
ATXN3-233ENST00000555816 ZNF76P36508 570 aa6.65□□□□□ -1.34
ATXN3-233ENST00000555816 KCNC1P48547 511 aa6.65□□□□□ -1.34
ATXN3-233ENST00000555816 MTHFSP49914 203 aa6.65□□□□□ -1.34
ATXN3-233ENST00000555816 ZNF445P59923 1031 aa6.65□□□□□ -1.34
ATXN3-233ENST00000555816 TCEAL1Q15170 157 aa6.65□□□□□ -1.34
ATXN3-233ENST00000555816 AMOTQ4VCS5 1084 aa6.65□□□□□ -1.34
ATXN3-233ENST00000555816 ZFYVE27Q5T4F4 411 aa6.65□□□□□ -1.34
ATXN3-233ENST00000555816 SPATA32Q96LK8 384 aa6.65□□□□□ -1.34
ATXN3-233ENST00000555816 FERD3LQ96RJ6 166 aa6.65□□□□□ -1.34
ATXN3-233ENST00000555816 IGSF5Q9NSI5 407 aa6.65□□□□□ -1.34
ATXN3-233ENST00000555816 SERPINB2P05120 415 aa6.64□□□□□ -1.35
ATXN3-233ENST00000555816 DBHP09172 617 aa6.64□□□□□ -1.35
ATXN3-233ENST00000555816 GUCY2CP25092 1073 aa6.64□□□□□ -1.35
ATXN3-233ENST00000555816 SKOR2Q2VWA4 1001 aaPredicted RBP6.64□□□□□ -1.35
ATXN3-233ENST00000555816 C2CD5Q86YS7 1000 aa6.64□□□□□ -1.35
ATXN3-233ENST00000555816 FEZF2Q8TBJ5 459 aa6.64□□□□□ -1.35
ATXN3-233ENST00000555816 PTCHD1Q96NR3 888 aa6.64□□□□□ -1.35
ATXN3-233ENST00000555816 POLKQ9UBT6 870 aa6.64□□□□□ -1.35
ATXN3-233ENST00000555816 SLC12A7Q9Y666 1083 aa6.64□□□□□ -1.35
ATXN3-233ENST00000555816 KDM6AO15550 1401 aaPredicted RBP6.64□□□□□ -1.35
ATXN3-233ENST00000555816 NCAPD2Q15021 1401 aa6.64□□□□□ -1.35
ATXN3-233ENST00000555816 RECKO95980 971 aa6.63□□□□□ -1.35
ATXN3-233ENST00000555816 NCAM1P13591 858 aa6.63□□□□□ -1.35
ATXN3-233ENST00000555816 ITGA4P13612 1032 aa6.63□□□□□ -1.35
ATXN3-233ENST00000555816 L1CAMP32004 1257 aa6.63□□□□□ -1.35
ATXN3-233ENST00000555816 LBX1P52954 281 aa6.63□□□□□ -1.35
ATXN3-233ENST00000555816 EIF4A2Q14240 407 aaKnown RBP6.63□□□□□ -1.35
ATXN3-233ENST00000555816 AXDND1Q5T1B0 1012 aaPredicted RBP6.63□□□□□ -1.35
ATXN3-233ENST00000555816 LDLRAD1Q5T700 205 aa6.63□□□□□ -1.35
ATXN3-233ENST00000555816 PRRT2Q7Z6L0 340 aaPredicted RBP6.63□□□□□ -1.35
ATXN3-233ENST00000555816 USP48Q86UV5 1035 aa6.63□□□□□ -1.35
ATXN3-233ENST00000555816 TP53I13Q8NBR0 393 aaPredicted RBP6.63□□□□□ -1.35
ATXN3-233ENST00000555816 ABHD8Q96I13 439 aa6.63□□□□□ -1.35
ATXN3-233ENST00000555816 FCRL3Q96P31 734 aaPredicted RBP6.63□□□□□ -1.35
ATXN3-233ENST00000555816 NARFQ9UHQ1 456 aa6.63□□□□□ -1.35
ATXN3-233ENST00000555816 ZNF214Q9UL59 606 aaPredicted RBP6.63□□□□□ -1.35
ATXN3-233ENST00000555816 TOGARAM1Q9Y4F4 1720 aa6.63□□□□□ -1.35
ATXN3-233ENST00000555816 UBR3Q6ZT12 1888 aa6.62□□□□□ -1.35
ATXN3-233ENST00000555816 CNTNAP1P78357 1384 aa6.62□□□□□ -1.35
ATXN3-233ENST00000555816 IQCA1LA6NCM1 817 aa6.62□□□□□ -1.35
ATXN3-233ENST00000555816 H0Y8X5 98 aa6.62□□□□□ -1.35
ATXN3-233ENST00000555816 FFAR3O14843 346 aa6.62□□□□□ -1.35
ATXN3-233ENST00000555816 MSL3P1P0C860 447 aa6.62□□□□□ -1.35
ATXN3-233ENST00000555816 FOXO4P98177 505 aa6.62□□□□□ -1.35
ATXN3-233ENST00000555816 ZNF200P98182 395 aaPredicted RBP6.62□□□□□ -1.35
ATXN3-233ENST00000555816 VMACQ2NL98 169 aa6.62□□□□□ -1.35
ATXN3-233ENST00000555816 SPATS1Q496A3 300 aa6.62□□□□□ -1.35
ATXN3-233ENST00000555816 EEF1DP3Q658K8 133 aa6.62□□□□□ -1.35
ATXN3-233ENST00000555816 DCAF15Q66K64 600 aa6.62□□□□□ -1.35
ATXN3-233ENST00000555816 BICRALQ6AI39 1079 aa6.62□□□□□ -1.35
ATXN3-233ENST00000555816 RCSD1Q6JBY9 416 aa6.62□□□□□ -1.35
ATXN3-233ENST00000555816 ZNF530Q6P9A1 599 aaPredicted RBP6.62□□□□□ -1.35
ATXN3-233ENST00000555816 UNC5AQ6ZN44 842 aa6.62□□□□□ -1.35
ATXN3-233ENST00000555816 FIBCD1Q8N539 461 aa6.62□□□□□ -1.35
ATXN3-233ENST00000555816 BACH2Q9BYV9 841 aa6.62□□□□□ -1.35
ATXN3-233ENST00000555816 JAG2Q9Y219 1238 aa6.62□□□□□ -1.35
ATXN3-233ENST00000555816 SOS1Q07889 1333 aaPredicted RBP6.61□□□□□ -1.35
ATXN3-233ENST00000555816 PASKQ96RG2 1323 aa6.61□□□□□ -1.35
ATXN3-233ENST00000555816 SH3D21A4FU49 640 aa6.61□□□□□ -1.35
ATXN3-233ENST00000555816 DDNO94850 711 aaPredicted RBP6.61□□□□□ -1.35
ATXN3-233ENST00000555816 RGS19P49795 217 aa6.61□□□□□ -1.35
ATXN3-233ENST00000555816 SLURP1P55000 103 aa6.61□□□□□ -1.35
ATXN3-233ENST00000555816 NCKAP1LP55160 1127 aa6.61□□□□□ -1.35
ATXN3-233ENST00000555816 MAP2K1Q02750 393 aaPredicted RBP6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms