RNA–Protein interactions for RNA: ENST00000555565.5

TDP1-212, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 524 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-212ENST00000555565 PLEKHA8P1O95397 391 aa12.46□□□□□ -0.41
TDP1-212ENST00000555565 MMP1P03956 469 aa12.46□□□□□ -0.41
TDP1-212ENST00000555565 SMARCA1P28370 1054 aa12.46□□□□□ -0.41
TDP1-212ENST00000555565 KIF5BP33176 963 aa12.46□□□□□ -0.41
TDP1-212ENST00000555565 MRPS9P82933 396 aaKnown RBP12.46□□□□□ -0.41
TDP1-212ENST00000555565 COASYQ13057 564 aa12.46□□□□□ -0.41
TDP1-212ENST00000555565 BMP2KLQ5H9B9 411 aa12.46□□□□□ -0.41
TDP1-212ENST00000555565 FAM26DQ5JW98 314 aa12.46□□□□□ -0.41
TDP1-212ENST00000555565 TMTC2Q8N394 836 aa12.46□□□□□ -0.41
TDP1-212ENST00000555565 FIBCD1Q8N539 461 aa12.46□□□□□ -0.41
TDP1-212ENST00000555565 SRBD1Q8N5C6 995 aaKnown RBP12.46□□□□□ -0.41
TDP1-212ENST00000555565 SMRP1Q8NCR6 262 aa12.46□□□□□ -0.41
TDP1-212ENST00000555565 ATP6V0A1Q93050 837 aa12.46□□□□□ -0.41
TDP1-212ENST00000555565 RRP36Q96EU6 259 aaKnown RBP12.46□□□□□ -0.41
TDP1-212ENST00000555565 TMEM87BQ96K49 555 aa12.46□□□□□ -0.41
TDP1-212ENST00000555565 INPP4AQ96PE3 977 aaPredicted RBP12.46□□□□□ -0.41
TDP1-212ENST00000555565 PLAGL2Q9UPG8 496 aa12.46□□□□□ -0.41
TDP1-212ENST00000555565 DOCK5Q9H7D0 1870 aa12.45□□□□□ -0.42
TDP1-212ENST00000555565 C17orf102A2RUQ5 167 aa12.45□□□□□ -0.42
TDP1-212ENST00000555565 CCDC69A6NI79 296 aa12.45□□□□□ -0.42
TDP1-212ENST00000555565 H3BRB1 525 aa12.45□□□□□ -0.42
TDP1-212ENST00000555565 MEIS2O14770 477 aa12.45□□□□□ -0.42
TDP1-212ENST00000555565 CAND2O75155 1236 aa12.45□□□□□ -0.42
TDP1-212ENST00000555565 SMIM10L2AP0DMW4 78 aa12.45□□□□□ -0.42
TDP1-212ENST00000555565 SMIM10L2BP0DMW5 78 aa12.45□□□□□ -0.42
TDP1-212ENST00000555565 RXRAP19793 462 aa12.45□□□□□ -0.42
TDP1-212ENST00000555565 AVPR2P30518 371 aa12.45□□□□□ -0.42
TDP1-212ENST00000555565 ICAM3P32942 547 aa12.45□□□□□ -0.42
TDP1-212ENST00000555565 LIFRP42702 1097 aa12.45□□□□□ -0.42
TDP1-212ENST00000555565 ADAM17P78536 824 aa12.45□□□□□ -0.42
TDP1-212ENST00000555565 SIGLEC14Q08ET2 396 aa12.45□□□□□ -0.42
TDP1-212ENST00000555565 SEMA3FQ13275 785 aa12.45□□□□□ -0.42
TDP1-212ENST00000555565 USP17L6PQ6QN14 398 aa12.45□□□□□ -0.42
TDP1-212ENST00000555565 NFXL1Q6ZNB6 911 aa12.45□□□□□ -0.42
TDP1-212ENST00000555565 ADGRD2Q7Z7M1 963 aa12.45□□□□□ -0.42
TDP1-212ENST00000555565 SUGP1Q8IWZ8 645 aaKnown RBP12.45□□□□□ -0.42
TDP1-212ENST00000555565 CMTR1Q8N1G2 835 aaKnown RBP12.45□□□□□ -0.42
TDP1-212ENST00000555565 CRIPAKQ8N1N5 446 aa12.45□□□□□ -0.42
TDP1-212ENST00000555565 LZTS2Q9BRK4 669 aa12.45□□□□□ -0.42
TDP1-212ENST00000555565 LRRC2Q9BYS8 371 aa12.45□□□□□ -0.42
TDP1-212ENST00000555565 TUT1Q9H6E5 874 aaKnown RBP12.45□□□□□ -0.42
TDP1-212ENST00000555565 ANO2Q9NQ90 1003 aa12.45□□□□□ -0.42
TDP1-212ENST00000555565 PTPRZ1P23471 2315 aaPredicted RBP12.45□□□□□ -0.42
TDP1-212ENST00000555565 PLXNA3P51805 1871 aa12.44□□□□□ -0.42
TDP1-212ENST00000555565 SPATA31C2B4DYI2 1134 aa12.44□□□□□ -0.42
TDP1-212ENST00000555565 ENPP3O14638 875 aa12.44□□□□□ -0.42
TDP1-212ENST00000555565 STAM2O75886 525 aa12.44□□□□□ -0.42
TDP1-212ENST00000555565 GLP2RO95838 553 aa12.44□□□□□ -0.42
TDP1-212ENST00000555565 CHRNA1P02708 482 aa12.44□□□□□ -0.42
TDP1-212ENST00000555565 CTSHP09668 335 aa12.44□□□□□ -0.42
TDP1-212ENST00000555565 GNAQP50148 359 aa12.44□□□□□ -0.42
TDP1-212ENST00000555565 GNPTABQ3T906 1256 aa12.44□□□□□ -0.42
TDP1-212ENST00000555565 CENPQQ7L2Z9 268 aaPredicted RBP12.44□□□□□ -0.42
TDP1-212ENST00000555565 ASCL5Q7RTU5 278 aa12.44□□□□□ -0.42
TDP1-212ENST00000555565 RAB11FIP4Q86YS3 637 aa12.44□□□□□ -0.42
TDP1-212ENST00000555565 EFHBQ8N7U6 833 aa12.44□□□□□ -0.42
TDP1-212ENST00000555565 APBB2Q92870 758 aa12.44□□□□□ -0.42
TDP1-212ENST00000555565 EHMT1Q9H9B1 1298 aa12.44□□□□□ -0.42
TDP1-212ENST00000555565 MLXIPQ9HAP2 919 aa12.44□□□□□ -0.42
TDP1-212ENST00000555565 RTEL1Q9NZ71 1219 aa12.44□□□□□ -0.42
TDP1-212ENST00000555565 SEC63Q9UGP8 760 aaKnown RBP12.44□□□□□ -0.42
TDP1-212ENST00000555565 ADGRA3Q8IWK6 1321 aa12.43□□□□□ -0.42
TDP1-212ENST00000555565 hCG_1642624A0A1W2PR95 340 aa12.43□□□□□ -0.42
TDP1-212ENST00000555565 PIK3CDO00329 1044 aa12.43□□□□□ -0.42
TDP1-212ENST00000555565 FIBPO43427 364 aa12.43□□□□□ -0.42
TDP1-212ENST00000555565 DGKIO75912 1065 aa12.43□□□□□ -0.42
TDP1-212ENST00000555565 CALM1P0DP23 149 aa12.43□□□□□ -0.42
TDP1-212ENST00000555565 CALM2P0DP24 149 aa12.43□□□□□ -0.42
TDP1-212ENST00000555565 CALM3P0DP25 149 aa12.43□□□□□ -0.42
TDP1-212ENST00000555565 PCNX4Q63HM2 1172 aa12.43□□□□□ -0.42
TDP1-212ENST00000555565 SGMS1Q86VZ5 419 aa12.43□□□□□ -0.42
TDP1-212ENST00000555565 SMARCC2Q8TAQ2 1214 aa12.43□□□□□ -0.42
TDP1-212ENST00000555565 SPPL3Q8TCT6 385 aa12.43□□□□□ -0.42
TDP1-212ENST00000555565 ATOH1Q92858 354 aaPredicted RBP12.43□□□□□ -0.42
TDP1-212ENST00000555565 PLVAPQ9BX97 442 aa12.43□□□□□ -0.42
TDP1-212ENST00000555565 SETD4Q9NVD3 440 aa12.43□□□□□ -0.42
TDP1-212ENST00000555565 RWDD3Q9Y3V2 267 aa12.43□□□□□ -0.42
TDP1-212ENST00000555565 TELO2Q9Y4R8 837 aa12.43□□□□□ -0.42
TDP1-212ENST00000555565 SLC12A7Q9Y666 1083 aa12.43□□□□□ -0.42
TDP1-212ENST00000555565 VPS13AQ96RL7 3174 aa12.42□□□□□ -0.42
TDP1-212ENST00000555565 H0Y858 1186 aa12.42□□□□□ -0.42
TDP1-212ENST00000555565 CSPG5O95196 566 aa12.42□□□□□ -0.42
TDP1-212ENST00000555565 PDGFBP01127 241 aaPredicted RBP12.42□□□□□ -0.42
TDP1-212ENST00000555565 LGALS2P05162 132 aa12.42□□□□□ -0.42
TDP1-212ENST00000555565 ITGB1P05556 798 aa12.42□□□□□ -0.42
TDP1-212ENST00000555565 NDUFV1P49821 464 aa12.42□□□□□ -0.42
TDP1-212ENST00000555565 NEDD9Q14511 834 aa12.42□□□□□ -0.42
TDP1-212ENST00000555565 XRRA1Q6P2D8 792 aa12.42□□□□□ -0.42
TDP1-212ENST00000555565 METTL7BQ6UX53 244 aa12.42□□□□□ -0.42
TDP1-212ENST00000555565 TMTC3Q6ZXV5 915 aa12.42□□□□□ -0.42
TDP1-212ENST00000555565 CYFIP1Q7L576 1253 aa12.42□□□□□ -0.42
TDP1-212ENST00000555565 CCDC82Q8N4S0 544 aa12.42□□□□□ -0.42
TDP1-212ENST00000555565 FANCBQ8NB91 859 aa12.42□□□□□ -0.42
TDP1-212ENST00000555565 SUSD6Q92537 303 aa12.42□□□□□ -0.42
TDP1-212ENST00000555565 CUL5Q93034 780 aa12.42□□□□□ -0.42
TDP1-212ENST00000555565 P2RX5Q93086 422 aa12.42□□□□□ -0.42
TDP1-212ENST00000555565 PHF7Q9BWX1 381 aaPredicted RBP12.42□□□□□ -0.42
TDP1-212ENST00000555565 PSTPIP2Q9H939 334 aa12.42□□□□□ -0.42
TDP1-212ENST00000555565 TLR9Q9NR96 1032 aa12.42□□□□□ -0.42
TDP1-212ENST00000555565 USP15Q9Y4E8 981 aaPredicted RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms