RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 PRIMA1Q86XR5 153 aa5.58□□□□□ -1.52
SRP54-207ENST00000555535 CLEC4DQ8WXI8 215 aa5.58□□□□□ -1.52
SRP54-207ENST00000555535 ARNTLO00327 626 aa5.57□□□□□ -1.52
SRP54-207ENST00000555535 MATN2O00339 956 aa5.57□□□□□ -1.52
SRP54-207ENST00000555535 SLC27A2O14975 620 aa5.57□□□□□ -1.52
SRP54-207ENST00000555535 GCP02774 474 aa5.57□□□□□ -1.52
SRP54-207ENST00000555535 PDIA4P13667 645 aaKnown RBP5.57□□□□□ -1.52
SRP54-207ENST00000555535 ITGB6P18564 788 aa5.57□□□□□ -1.52
SRP54-207ENST00000555535 SOX9P48436 509 aa5.57□□□□□ -1.52
SRP54-207ENST00000555535 SYCE2Q6PIF2 218 aa5.57□□□□□ -1.52
SRP54-207ENST00000555535 GLCCI1Q86VQ1 547 aa5.57□□□□□ -1.52
SRP54-207ENST00000555535 KREMEN2Q8NCW0 462 aa5.57□□□□□ -1.52
SRP54-207ENST00000555535 ADARB2Q9NS39 739 aaKnown RBP5.57□□□□□ -1.52
SRP54-207ENST00000555535 FBXO10Q9UK96 956 aa5.57□□□□□ -1.52
SRP54-207ENST00000555535 A0A0A6YYK5 440 aaPredicted RBP5.56□□□□□ -1.52
SRP54-207ENST00000555535 ESYT3A0FGR9 886 aa5.56□□□□□ -1.52
SRP54-207ENST00000555535 MASP2O00187 686 aa5.56□□□□□ -1.52
SRP54-207ENST00000555535 IL18BPO95998 194 aa5.56□□□□□ -1.52
SRP54-207ENST00000555535 LMNAP02545 664 aaKnown RBP5.56□□□□□ -1.52
SRP54-207ENST00000555535 PTGS2P35354 604 aa5.56□□□□□ -1.52
SRP54-207ENST00000555535 FSTL1Q12841 308 aa5.56□□□□□ -1.52
SRP54-207ENST00000555535 CRHR2Q13324 411 aa5.56□□□□□ -1.52
SRP54-207ENST00000555535 TUSC3Q13454 348 aa5.56□□□□□ -1.52
SRP54-207ENST00000555535 GRM7Q14831 915 aa5.56□□□□□ -1.52
SRP54-207ENST00000555535 ZNF662Q6ZS27 426 aa5.56□□□□□ -1.52
SRP54-207ENST00000555535 BHLHA9Q7RTU4 235 aa5.56□□□□□ -1.52
SRP54-207ENST00000555535 RPUSD2Q8IZ73 545 aaKnown RBP5.56□□□□□ -1.52
SRP54-207ENST00000555535 TMEM87AQ8NBN3 555 aa5.56□□□□□ -1.52
SRP54-207ENST00000555535 PIP4K2CQ8TBX8 421 aa5.56□□□□□ -1.52
SRP54-207ENST00000555535 BTN2A2Q8WVV5 523 aa5.56□□□□□ -1.52
SRP54-207ENST00000555535 TACO1Q9BSH4 297 aaKnown RBP5.56□□□□□ -1.52
SRP54-207ENST00000555535 GINM1Q9NU53 330 aa5.56□□□□□ -1.52
SRP54-207ENST00000555535 PMS2P1A4D2B8 440 aa5.55□□□□□ -1.52
SRP54-207ENST00000555535 CAPN14A8MX76 684 aa5.55□□□□□ -1.52
SRP54-207ENST00000555535 CDK4P11802 303 aa5.55□□□□□ -1.52
SRP54-207ENST00000555535 RRADP55042 308 aa5.55□□□□□ -1.52
SRP54-207ENST00000555535 C21orf58P58505 322 aa5.55□□□□□ -1.52
SRP54-207ENST00000555535 KRTAP10-9P60411 292 aa5.55□□□□□ -1.52
SRP54-207ENST00000555535 D2HGDHQ8N465 521 aa5.55□□□□□ -1.52
SRP54-207ENST00000555535 MPHOSPH9Q99550 1183 aa5.55□□□□□ -1.52
SRP54-207ENST00000555535 METTL5Q9NRN9 209 aaKnown RBP5.55□□□□□ -1.52
SRP54-207ENST00000555535 ERBB2P04626 1255 aa5.54□□□□□ -1.52
SRP54-207ENST00000555535 KCNJ6P48051 423 aa5.54□□□□□ -1.52
SRP54-207ENST00000555535 USP30Q70CQ3 517 aa5.54□□□□□ -1.52
SRP54-207ENST00000555535 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.54□□□□□ -1.52
SRP54-207ENST00000555535 UHMK1Q8TAS1 419 aaKnown RBP5.54□□□□□ -1.52
SRP54-207ENST00000555535 CDIP1Q9H305 208 aa5.54□□□□□ -1.52
SRP54-207ENST00000555535 RIOX1Q9H6W3 641 aa5.54□□□□□ -1.52
SRP54-207ENST00000555535 NPFFR2Q9Y5X5 522 aa5.54□□□□□ -1.52
SRP54-207ENST00000555535 INO80B-WBP1J3KQ70 363 aa5.53□□□□□ -1.52
SRP54-207ENST00000555535 LCP1P13796 627 aa5.53□□□□□ -1.52
SRP54-207ENST00000555535 CD38P28907 300 aa5.53□□□□□ -1.52
SRP54-207ENST00000555535 SPIRE1Q08AE8 756 aa5.53□□□□□ -1.52
SRP54-207ENST00000555535 RRP1BQ14684 758 aaKnown RBP5.53□□□□□ -1.52
SRP54-207ENST00000555535 NOLC1Q14978 699 aaKnown RBP eCLIP5.53□□□□□ -1.52
SRP54-207ENST00000555535 CXXC5Q7LFL8 322 aaKnown RBP5.53□□□□□ -1.52
SRP54-207ENST00000555535 OTOP3Q7RTS5 596 aa5.53□□□□□ -1.52
SRP54-207ENST00000555535 ANKRD35Q8N283 1001 aa5.53□□□□□ -1.52
SRP54-207ENST00000555535 CFHR4Q92496 578 aa5.53□□□□□ -1.52
SRP54-207ENST00000555535 INO80BQ9C086 356 aaPredicted RBP5.53□□□□□ -1.52
SRP54-207ENST00000555535 ZDHHC5Q9C0B5 715 aa5.53□□□□□ -1.52
SRP54-207ENST00000555535 GZF1Q9H116 711 aaPredicted RBP5.53□□□□□ -1.52
SRP54-207ENST00000555535 HMGCRP04035 888 aa5.52□□□□□ -1.53
SRP54-207ENST00000555535 CCDC27Q2M243 656 aa5.52□□□□□ -1.53
SRP54-207ENST00000555535 WDR72Q3MJ13 1102 aa5.52□□□□□ -1.53
SRP54-207ENST00000555535 LDLRAD1Q5T700 205 aa5.52□□□□□ -1.53
SRP54-207ENST00000555535 HAS1Q92839 578 aa5.52□□□□□ -1.53
SRP54-207ENST00000555535 LRP2BPQ9P2M1 347 aa5.52□□□□□ -1.53
SRP54-207ENST00000555535 ZNHIT2Q9UHR6 403 aa5.52□□□□□ -1.53
SRP54-207ENST00000555535 PACSIN3Q9UKS6 424 aa5.52□□□□□ -1.53
SRP54-207ENST00000555535 EFR3BQ9Y2G0 817 aa5.52□□□□□ -1.53
SRP54-207ENST00000555535 EPHA5P54756 1037 aa5.51□□□□□ -1.53
SRP54-207ENST00000555535 GFRA1P56159 465 aa5.51□□□□□ -1.53
SRP54-207ENST00000555535 ZNF394Q53GI3 561 aa5.51□□□□□ -1.53
SRP54-207ENST00000555535 JAM3Q9BX67 310 aa5.51□□□□□ -1.53
SRP54-207ENST00000555535 GPR27Q9NS67 375 aa5.51□□□□□ -1.53
SRP54-207ENST00000555535 TRAF5O00463 557 aa5.5□□□□□ -1.53
SRP54-207ENST00000555535 PROZP22891 400 aa5.5□□□□□ -1.53
SRP54-207ENST00000555535 ZNF227Q86WZ6 799 aa5.5□□□□□ -1.53
SRP54-207ENST00000555535 BCL2L13Q9BXK5 485 aa5.5□□□□□ -1.53
SRP54-207ENST00000555535 OR10A2Q9H208 303 aa5.5□□□□□ -1.53
SRP54-207ENST00000555535 NRDE2Q9H7Z3 1164 aa5.5□□□□□ -1.53
SRP54-207ENST00000555535 GPRC5BQ9NZH0 403 aa5.5□□□□□ -1.53
SRP54-207ENST00000555535 PCDHGB7Q9Y5F8 929 aa5.5□□□□□ -1.53
SRP54-207ENST00000555535 ZAR1LA6NP61 321 aa5.49□□□□□ -1.53
SRP54-207ENST00000555535 PPFIA4O75335 1185 aa5.49□□□□□ -1.53
SRP54-207ENST00000555535 MEOX1P50221 254 aa5.49□□□□□ -1.53
SRP54-207ENST00000555535 CNGB1Q14028 1251 aaPredicted RBP5.49□□□□□ -1.53
SRP54-207ENST00000555535 TBR1Q16650 682 aa5.49□□□□□ -1.53
SRP54-207ENST00000555535 PRSS53Q2L4Q9 553 aa5.49□□□□□ -1.53
SRP54-207ENST00000555535 GPR135Q8IZ08 494 aa5.49□□□□□ -1.53
SRP54-207ENST00000555535 GIPC2Q8TF65 315 aa5.49□□□□□ -1.53
SRP54-207ENST00000555535 SHDQ96IW2 340 aa5.49□□□□□ -1.53
SRP54-207ENST00000555535 DDX41Q9UJV9 622 aaKnown RBP5.49□□□□□ -1.53
SRP54-207ENST00000555535 SLC26A4O43511 780 aa5.48□□□□□ -1.53
SRP54-207ENST00000555535 GNAT1P11488 350 aa5.48□□□□□ -1.53
SRP54-207ENST00000555535 DBPQ10586 325 aaPredicted RBP5.48□□□□□ -1.53
SRP54-207ENST00000555535 EIF4HQ15056 248 aaKnown RBP5.48□□□□□ -1.53
SRP54-207ENST00000555535 SV2CQ496J9 727 aa5.48□□□□□ -1.53
SRP54-207ENST00000555535 EPHA10Q5JZY3 1008 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms