RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 CALCRLQ16602 461 aa11.1□□□□□ -0.63
PSEN1-213ENST00000555386 Q4G0T1 1027 aa11.1□□□□□ -0.63
PSEN1-213ENST00000555386 TTC38Q5R3I4 469 aa11.1□□□□□ -0.63
PSEN1-213ENST00000555386 CCSAPQ6IQ19 270 aaPredicted RBP11.1□□□□□ -0.63
PSEN1-213ENST00000555386 FAM173BQ6P4H8 233 aa11.1□□□□□ -0.63
PSEN1-213ENST00000555386 GPR20Q99678 358 aa11.1□□□□□ -0.63
PSEN1-213ENST00000555386 TSEN34Q9BSV6 310 aaKnown RBP11.1□□□□□ -0.63
PSEN1-213ENST00000555386 MTG1Q9BT17 334 aaPredicted RBP11.1□□□□□ -0.63
PSEN1-213ENST00000555386 TEKT3Q9BXF9 490 aa11.1□□□□□ -0.63
PSEN1-213ENST00000555386 POLR3EQ9NVU0 708 aa11.1□□□□□ -0.63
PSEN1-213ENST00000555386 PHF24Q9UPV7 400 aa11.1□□□□□ -0.63
PSEN1-213ENST00000555386 CYP3A7-CYP3A51PA0A087WV96 503 aa11.09□□□□□ -0.63
PSEN1-213ENST00000555386 BACH1O14867 736 aa11.09□□□□□ -0.63
PSEN1-213ENST00000555386 NEMFO60524 1076 aa11.09□□□□□ -0.63
PSEN1-213ENST00000555386 PQBP1O60828 265 aaKnown RBP11.09□□□□□ -0.63
PSEN1-213ENST00000555386 GCFC2P16383 781 aaKnown RBP11.09□□□□□ -0.63
PSEN1-213ENST00000555386 CYP3A7P24462 503 aa11.09□□□□□ -0.63
PSEN1-213ENST00000555386 ACTR2P61160 394 aa11.09□□□□□ -0.63
PSEN1-213ENST00000555386 PURAQ00577 322 aaKnown RBP11.09□□□□□ -0.63
PSEN1-213ENST00000555386 LRRC26Q2I0M4 334 aa11.09□□□□□ -0.63
PSEN1-213ENST00000555386 PPP4R3AQ6IN85 833 aa11.09□□□□□ -0.63
PSEN1-213ENST00000555386 GLG1Q92896 1179 aa11.09□□□□□ -0.63
PSEN1-213ENST00000555386 EMID1Q96A84 441 aaPredicted RBP11.09□□□□□ -0.63
PSEN1-213ENST00000555386 NAP1L4Q99733 375 aaKnown RBP11.09□□□□□ -0.63
PSEN1-213ENST00000555386 UNC45AQ9H3U1 944 aa11.09□□□□□ -0.63
PSEN1-213ENST00000555386 CLSTN2Q9H4D0 955 aa11.09□□□□□ -0.63
PSEN1-213ENST00000555386 TBC1D22BQ9NU19 505 aa11.09□□□□□ -0.63
PSEN1-213ENST00000555386 RCOR1Q9UKL0 485 aa11.09□□□□□ -0.63
PSEN1-213ENST00000555386 PCDHB6Q9Y5E3 794 aa11.09□□□□□ -0.63
PSEN1-213ENST00000555386 NFASCO94856 1347 aa11.09□□□□□ -0.63
PSEN1-213ENST00000555386 SCN10AQ9Y5Y9 1956 aa11.08□□□□□ -0.64
PSEN1-213ENST00000555386 GSTTP1A0A1W2PQM5 241 aa11.08□□□□□ -0.64
PSEN1-213ENST00000555386 DHX15O43143 795 aaKnown RBP11.08□□□□□ -0.64
PSEN1-213ENST00000555386 PPFIA4O75335 1185 aa11.08□□□□□ -0.64
PSEN1-213ENST00000555386 CCNE2O96020 404 aa11.08□□□□□ -0.64
PSEN1-213ENST00000555386 LGALS2P05162 132 aa11.08□□□□□ -0.64
PSEN1-213ENST00000555386 COL6A1P12109 1028 aa11.08□□□□□ -0.64
PSEN1-213ENST00000555386 TXKP42681 527 aa11.08□□□□□ -0.64
PSEN1-213ENST00000555386 TOB1P50616 345 aaPredicted RBP11.08□□□□□ -0.64
PSEN1-213ENST00000555386 CEBPZQ03701 1054 aaKnown RBP11.08□□□□□ -0.64
PSEN1-213ENST00000555386 ITGA7Q13683 1181 aa11.08□□□□□ -0.64
PSEN1-213ENST00000555386 KIAA0753Q2KHM9 967 aa11.08□□□□□ -0.64
PSEN1-213ENST00000555386 NBPF20Q3BBV1 942 aa11.08□□□□□ -0.64
PSEN1-213ENST00000555386 TRIM60Q495X7 471 aa11.08□□□□□ -0.64
PSEN1-213ENST00000555386 NCAPH2Q6IBW4 605 aa11.08□□□□□ -0.64
PSEN1-213ENST00000555386 MOXD1Q6UVY6 613 aa11.08□□□□□ -0.64
PSEN1-213ENST00000555386 SLC39A5Q6ZMH5 540 aa11.08□□□□□ -0.64
PSEN1-213ENST00000555386 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.08□□□□□ -0.64
PSEN1-213ENST00000555386 UBE2Q1Q7Z7E8 422 aa11.08□□□□□ -0.64
PSEN1-213ENST00000555386 C7orf61Q8IZ16 206 aa11.08□□□□□ -0.64
PSEN1-213ENST00000555386 ETNPPLQ8TBG4 499 aa11.08□□□□□ -0.64
PSEN1-213ENST00000555386 FAM200AQ8TCP9 573 aa11.08□□□□□ -0.64
PSEN1-213ENST00000555386 SEPT1Q8WYJ6 367 aa11.08□□□□□ -0.64
PSEN1-213ENST00000555386 SLC5A5Q92911 643 aa11.08□□□□□ -0.64
PSEN1-213ENST00000555386 MBOAT7Q96N66 472 aa11.08□□□□□ -0.64
PSEN1-213ENST00000555386 TMEM60Q9H2L4 133 aa11.08□□□□□ -0.64
PSEN1-213ENST00000555386 TNMDQ9H2S6 317 aa11.08□□□□□ -0.64
PSEN1-213ENST00000555386 A0A0U1RQG5 324 aaPredicted RBP11.07□□□□□ -0.64
PSEN1-213ENST00000555386 KPNA6O60684 536 aa11.07□□□□□ -0.64
PSEN1-213ENST00000555386 OFD1O75665 1012 aa11.07□□□□□ -0.64
PSEN1-213ENST00000555386 TPM3P06753 285 aa11.07□□□□□ -0.64
PSEN1-213ENST00000555386 LIG1P18858 919 aa11.07□□□□□ -0.64
PSEN1-213ENST00000555386 PSEN2P49810 448 aa11.07□□□□□ -0.64
PSEN1-213ENST00000555386 TERF1P54274 439 aa11.07□□□□□ -0.64
PSEN1-213ENST00000555386 RTP1P59025 263 aa11.07□□□□□ -0.64
PSEN1-213ENST00000555386 CACNB1Q02641 598 aaPredicted RBP11.07□□□□□ -0.64
PSEN1-213ENST00000555386 MFSD10Q14728 455 aa11.07□□□□□ -0.64
PSEN1-213ENST00000555386 SWSAP1Q6NVH7 229 aa11.07□□□□□ -0.64
PSEN1-213ENST00000555386 MIER3Q7Z3K6 550 aa11.07□□□□□ -0.64
PSEN1-213ENST00000555386 CKAP2LQ8IYA6 745 aa11.07□□□□□ -0.64
PSEN1-213ENST00000555386 HAS1Q92839 578 aa11.07□□□□□ -0.64
PSEN1-213ENST00000555386 HTATIP2Q9BUP3 242 aa11.07□□□□□ -0.64
PSEN1-213ENST00000555386 PRDM5Q9NQX1 630 aaPredicted RBP11.07□□□□□ -0.64
PSEN1-213ENST00000555386 DACT1Q9NYF0 836 aa11.07□□□□□ -0.64
PSEN1-213ENST00000555386 TFIP11Q9UBB9 837 aaKnown RBP11.07□□□□□ -0.64
PSEN1-213ENST00000555386 EVPLQ92817 2033 aa11.07□□□□□ -0.64
PSEN1-213ENST00000555386 H3BRB1 525 aa11.06□□□□□ -0.64
PSEN1-213ENST00000555386 EVI5O60447 810 aa11.06□□□□□ -0.64
PSEN1-213ENST00000555386 PSMD10O75832 226 aa11.06□□□□□ -0.64
PSEN1-213ENST00000555386 CABYRO75952 493 aa11.06□□□□□ -0.64
PSEN1-213ENST00000555386 PTMAP06454 111 aaKnown RBP11.06□□□□□ -0.64
PSEN1-213ENST00000555386 SUPT20HL2P0C7V6 817 aa11.06□□□□□ -0.64
PSEN1-213ENST00000555386 CAPN2P17655 700 aa11.06□□□□□ -0.64
PSEN1-213ENST00000555386 NKX3-2P78367 333 aa11.06□□□□□ -0.64
PSEN1-213ENST00000555386 KRT76Q01546 638 aa11.06□□□□□ -0.64
PSEN1-213ENST00000555386 PTGDRQ13258 359 aa11.06□□□□□ -0.64
PSEN1-213ENST00000555386 MIS18BP1Q6P0N0 1132 aa11.06□□□□□ -0.64
PSEN1-213ENST00000555386 BRAPQ7Z569 592 aa11.06□□□□□ -0.64
PSEN1-213ENST00000555386 C7orf31Q8N865 590 aa11.06□□□□□ -0.64
PSEN1-213ENST00000555386 KAT2BQ92831 832 aa11.06□□□□□ -0.64
PSEN1-213ENST00000555386 FAM20AQ96MK3 541 aa11.06□□□□□ -0.64
PSEN1-213ENST00000555386 RIT2Q99578 217 aa11.06□□□□□ -0.64
PSEN1-213ENST00000555386 C16orf70Q9BSU1 422 aa11.06□□□□□ -0.64
PSEN1-213ENST00000555386 FTOQ9C0B1 505 aaKnown RBP eCLIP11.06□□□□□ -0.64
PSEN1-213ENST00000555386 TUT1Q9H6E5 874 aaKnown RBP11.06□□□□□ -0.64
PSEN1-213ENST00000555386 AZI2Q9H6S1 392 aa11.06□□□□□ -0.64
PSEN1-213ENST00000555386 TTC12Q9H892 705 aaPredicted RBP11.06□□□□□ -0.64
PSEN1-213ENST00000555386 KCNMB3Q9NPA1 279 aa11.06□□□□□ -0.64
PSEN1-213ENST00000555386 DISC1Q9NRI5 854 aa11.06□□□□□ -0.64
PSEN1-213ENST00000555386 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms