RNA–Protein interactions for RNA: ENST00000555303.1

AC004828.1-201, humanhuman

TSL 3 BASIC

Gene AC004828.1, Length 654 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004828.1-201ENST00000555303 SKIV2LQ15477 1246 aaKnown RBP10.28□□□□□ -0.76
AC004828.1-201ENST00000555303 PFKFB3Q16875 520 aaPredicted RBP10.28□□□□□ -0.76
AC004828.1-201ENST00000555303 TYW1BQ6NUM6 668 aa10.28□□□□□ -0.76
AC004828.1-201ENST00000555303 BLOC1S2Q6QNY1 142 aa10.28□□□□□ -0.76
AC004828.1-201ENST00000555303 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.28□□□□□ -0.76
AC004828.1-201ENST00000555303 PLPPR4Q7Z2D5 763 aa10.28□□□□□ -0.76
AC004828.1-201ENST00000555303 TMCO2Q7Z6W1 182 aaPredicted RBP10.28□□□□□ -0.76
AC004828.1-201ENST00000555303 GDPD5Q8WTR4 605 aa10.28□□□□□ -0.76
AC004828.1-201ENST00000555303 HLA-CQ95604 372 aa10.28□□□□□ -0.76
AC004828.1-201ENST00000555303 TOP1MTQ969P6 601 aa10.28□□□□□ -0.76
AC004828.1-201ENST00000555303 TCEANC2Q96MN5 208 aa10.28□□□□□ -0.76
AC004828.1-201ENST00000555303 UHRF1Q96T88 793 aaPredicted RBP10.28□□□□□ -0.76
AC004828.1-201ENST00000555303 YME1L1Q96TA2 773 aa10.28□□□□□ -0.76
AC004828.1-201ENST00000555303 SQORQ9Y6N5 450 aa10.28□□□□□ -0.76
AC004828.1-201ENST00000555303 V9GY48 417 aaPredicted RBP10.28□□□□□ -0.76
AC004828.1-201ENST00000555303 WDR81Q562E7 1941 aa10.28□□□□□ -0.76
AC004828.1-201ENST00000555303 LOXHD1Q8IVV2 1947 aa10.28□□□□□ -0.76
AC004828.1-201ENST00000555303 MEIS1O00470 390 aa10.27□□□□□ -0.77
AC004828.1-201ENST00000555303 ATG7O95352 703 aa10.27□□□□□ -0.77
AC004828.1-201ENST00000555303 SCG2P13521 617 aa10.27□□□□□ -0.77
AC004828.1-201ENST00000555303 PSMA5P28066 241 aa10.27□□□□□ -0.77
AC004828.1-201ENST00000555303 CDC27P30260 824 aa10.27□□□□□ -0.77
AC004828.1-201ENST00000555303 ACTR2P61160 394 aa10.27□□□□□ -0.77
AC004828.1-201ENST00000555303 SETQ01105 290 aaPredicted RBP10.27□□□□□ -0.77
AC004828.1-201ENST00000555303 MGAT3Q09327 533 aa10.27□□□□□ -0.77
AC004828.1-201ENST00000555303 FAM117BQ6P1L5 589 aa10.27□□□□□ -0.77
AC004828.1-201ENST00000555303 TSHZ1Q6ZSZ6 1077 aa10.27□□□□□ -0.77
AC004828.1-201ENST00000555303 FBXO22Q8NEZ5 403 aa10.27□□□□□ -0.77
AC004828.1-201ENST00000555303 BICD2Q8TD16 824 aa10.27□□□□□ -0.77
AC004828.1-201ENST00000555303 CCDC136Q96JN2 1154 aa10.27□□□□□ -0.77
AC004828.1-201ENST00000555303 AGXT2Q9BYV1 514 aa10.27□□□□□ -0.77
AC004828.1-201ENST00000555303 ZMYND12Q9H0C1 365 aa10.27□□□□□ -0.77
AC004828.1-201ENST00000555303 SUGCTQ9HAC7 445 aa10.27□□□□□ -0.77
AC004828.1-201ENST00000555303 AGO4Q9HCK5 861 aaKnown RBP10.27□□□□□ -0.77
AC004828.1-201ENST00000555303 C6orf50Q9HD87 102 aa10.27□□□□□ -0.77
AC004828.1-201ENST00000555303 FAM217BQ9NTX9 383 aaPredicted RBP10.27□□□□□ -0.77
AC004828.1-201ENST00000555303 PKD2L1Q9P0L9 805 aa10.27□□□□□ -0.77
AC004828.1-201ENST00000555303 TRPC6Q9Y210 931 aa10.27□□□□□ -0.77
AC004828.1-201ENST00000555303 RWDD3Q9Y3V2 267 aa10.27□□□□□ -0.77
AC004828.1-201ENST00000555303 TELO2Q9Y4R8 837 aa10.27□□□□□ -0.77
AC004828.1-201ENST00000555303 TTC3P53804 2025 aa10.27□□□□□ -0.77
AC004828.1-201ENST00000555303 BRWD1Q9NSI6 2320 aa10.27□□□□□ -0.77
AC004828.1-201ENST00000555303 COL1A2P08123 1366 aa10.26□□□□□ -0.77
AC004828.1-201ENST00000555303 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.26□□□□□ -0.77
AC004828.1-201ENST00000555303 M0QZ92 97 aa10.26□□□□□ -0.77
AC004828.1-201ENST00000555303 CHRNA1P02708 482 aa10.26□□□□□ -0.77
AC004828.1-201ENST00000555303 CYP3A4P08684 503 aa10.26□□□□□ -0.77
AC004828.1-201ENST00000555303 BMP1P13497 986 aa10.26□□□□□ -0.77
AC004828.1-201ENST00000555303 INSRRP14616 1297 aa10.26□□□□□ -0.77
AC004828.1-201ENST00000555303 MARK3P27448 753 aa10.26□□□□□ -0.77
AC004828.1-201ENST00000555303 GNA11P29992 359 aa10.26□□□□□ -0.77
AC004828.1-201ENST00000555303 ZNF76P36508 570 aa10.26□□□□□ -0.77
AC004828.1-201ENST00000555303 MRPS6P82932 125 aaKnown RBP10.26□□□□□ -0.77
AC004828.1-201ENST00000555303 LPIN1Q14693 890 aa10.26□□□□□ -0.77
AC004828.1-201ENST00000555303 PTPROQ16827 1216 aa10.26□□□□□ -0.77
AC004828.1-201ENST00000555303 TIGD5Q53EQ6 642 aa10.26□□□□□ -0.77
AC004828.1-201ENST00000555303 FBXO47Q5MNV8 452 aa10.26□□□□□ -0.77
AC004828.1-201ENST00000555303 MARCH8Q5T0T0 291 aa10.26□□□□□ -0.77
AC004828.1-201ENST00000555303 IER5Q5VY09 327 aa10.26□□□□□ -0.77
AC004828.1-201ENST00000555303 FAM160B1Q5W0V3 765 aa10.26□□□□□ -0.77
AC004828.1-201ENST00000555303 RUFY4Q6ZNE9 571 aa10.26□□□□□ -0.77
AC004828.1-201ENST00000555303 Q6ZUG5 572 aa10.26□□□□□ -0.77
AC004828.1-201ENST00000555303 SPRED2Q7Z698 418 aa10.26□□□□□ -0.77
AC004828.1-201ENST00000555303 SKAP1Q86WV1 359 aa10.26□□□□□ -0.77
AC004828.1-201ENST00000555303 REXO1Q8N1G1 1221 aaKnown RBP10.26□□□□□ -0.77
AC004828.1-201ENST00000555303 CCDC148Q8NFR7 591 aa10.26□□□□□ -0.77
AC004828.1-201ENST00000555303 CRYGNQ8WXF5 182 aa10.26□□□□□ -0.77
AC004828.1-201ENST00000555303 BRF1Q92994 677 aa10.26□□□□□ -0.77
AC004828.1-201ENST00000555303 JAKMIP1Q96N16 626 aaKnown RBP10.26□□□□□ -0.77
AC004828.1-201ENST00000555303 PCYT2Q99447 389 aa10.26□□□□□ -0.77
AC004828.1-201ENST00000555303 FTHL17Q9BXU8 183 aa10.26□□□□□ -0.77
AC004828.1-201ENST00000555303 RNF26Q9BY78 433 aaPredicted RBP10.26□□□□□ -0.77
AC004828.1-201ENST00000555303 TCEAL9Q9UHQ7 104 aa10.26□□□□□ -0.77
AC004828.1-201ENST00000555303 MTUS1Q9ULD2 1270 aa10.26□□□□□ -0.77
AC004828.1-201ENST00000555303 NAP1L2Q9ULW6 460 aaPredicted RBP10.26□□□□□ -0.77
AC004828.1-201ENST00000555303 PCDHA2Q9Y5H9 948 aa10.26□□□□□ -0.77
AC004828.1-201ENST00000555303 SNX14Q9Y5W7 946 aa10.26□□□□□ -0.77
AC004828.1-201ENST00000555303 TCF20Q9UGU0 1960 aaKnown RBP10.26□□□□□ -0.77
AC004828.1-201ENST00000555303 KDM3AQ9Y4C1 1321 aa10.26□□□□□ -0.77
AC004828.1-201ENST00000555303 ATG2AQ2TAZ0 1938 aa10.25□□□□□ -0.77
AC004828.1-201ENST00000555303 IGKV6D-21A0A0A0MT36 114 aa10.25□□□□□ -0.77
AC004828.1-201ENST00000555303 SMIM35A0A1B0GVV1 85 aa10.25□□□□□ -0.77
AC004828.1-201ENST00000555303 H3BNC9 293 aa10.25□□□□□ -0.77
AC004828.1-201ENST00000555303 PRPF3O43395 683 aaKnown RBP10.25□□□□□ -0.77
AC004828.1-201ENST00000555303 ARP10275 920 aa10.25□□□□□ -0.77
AC004828.1-201ENST00000555303 GHRP10912 638 aa10.25□□□□□ -0.77
AC004828.1-201ENST00000555303 RPS6KB1P23443 525 aa10.25□□□□□ -0.77
AC004828.1-201ENST00000555303 ADD1P35611 737 aaKnown RBP10.25□□□□□ -0.77
AC004828.1-201ENST00000555303 STAT5BP51692 787 aa10.25□□□□□ -0.77
AC004828.1-201ENST00000555303 EVCP57679 992 aa10.25□□□□□ -0.77
AC004828.1-201ENST00000555303 AKAP17AQ02040 695 aaKnown RBP10.25□□□□□ -0.77
AC004828.1-201ENST00000555303 TFF2Q03403 129 aa10.25□□□□□ -0.77
AC004828.1-201ENST00000555303 APOBRQ0VD83 1088 aa10.25□□□□□ -0.77
AC004828.1-201ENST00000555303 ITGB3BPQ13352 177 aaPredicted RBP10.25□□□□□ -0.77
AC004828.1-201ENST00000555303 PLCB4Q15147 1175 aa10.25□□□□□ -0.77
AC004828.1-201ENST00000555303 EPC2Q52LR7 807 aa10.25□□□□□ -0.77
AC004828.1-201ENST00000555303 KRT40Q6A162 431 aa10.25□□□□□ -0.77
AC004828.1-201ENST00000555303 SMAP1Q8IYB5 467 aaPredicted RBP10.25□□□□□ -0.77
AC004828.1-201ENST00000555303 FAM177A1Q8N128 213 aaPredicted RBP10.25□□□□□ -0.77
AC004828.1-201ENST00000555303 NME8Q8N427 588 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms