RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 ZFP69BQ9UJL9 534 aa7.84□□□□□ -1.15
VRK1-203ENST00000555067 AQP7O14520 342 aa7.83□□□□□ -1.16
VRK1-203ENST00000555067 PDPK1O15530 556 aa7.83□□□□□ -1.16
VRK1-203ENST00000555067 KLHL18O94889 574 aa7.83□□□□□ -1.16
VRK1-203ENST00000555067 CKMP06732 381 aa7.83□□□□□ -1.16
VRK1-203ENST00000555067 TGFB2P61812 414 aa7.83□□□□□ -1.16
VRK1-203ENST00000555067 PURAQ00577 322 aaKnown RBP7.83□□□□□ -1.16
VRK1-203ENST00000555067 RASGRF1Q13972 1273 aa7.83□□□□□ -1.16
VRK1-203ENST00000555067 NBPF6Q5VWK0 638 aa7.83□□□□□ -1.16
VRK1-203ENST00000555067 RALYLQ86SE5 291 aaKnown RBP7.83□□□□□ -1.16
VRK1-203ENST00000555067 RBM12BQ8IXT5 1001 aaKnown RBP7.83□□□□□ -1.16
VRK1-203ENST00000555067 NUDT10Q8NFP7 164 aa7.83□□□□□ -1.16
VRK1-203ENST00000555067 NUDT11Q96G61 164 aa7.83□□□□□ -1.16
VRK1-203ENST00000555067 NBPF4Q96M43 638 aa7.83□□□□□ -1.16
VRK1-203ENST00000555067 JADE2Q9NQC1 790 aa7.83□□□□□ -1.16
VRK1-203ENST00000555067 ZDHHC9Q9Y397 364 aa7.83□□□□□ -1.16
VRK1-203ENST00000555067 TELO2Q9Y4R8 837 aa7.83□□□□□ -1.16
VRK1-203ENST00000555067 B4GALT4O60513 344 aa7.82□□□□□ -1.16
VRK1-203ENST00000555067 KNG1P01042 644 aa7.82□□□□□ -1.16
VRK1-203ENST00000555067 FHL2Q14192 279 aa7.82□□□□□ -1.16
VRK1-203ENST00000555067 MTERF2Q49AM1 385 aa7.82□□□□□ -1.16
VRK1-203ENST00000555067 MIIPQ5JXC2 388 aa7.82□□□□□ -1.16
VRK1-203ENST00000555067 Q6ZUG5 572 aa7.82□□□□□ -1.16
VRK1-203ENST00000555067 ASXL2Q76L83 1435 aa7.82□□□□□ -1.16
VRK1-203ENST00000555067 SCUBE1Q8IWY4 988 aa7.82□□□□□ -1.16
VRK1-203ENST00000555067 REXO1L1PQ8IX06 675 aa7.82□□□□□ -1.16
VRK1-203ENST00000555067 KCND1Q9NSA2 647 aa7.82□□□□□ -1.16
VRK1-203ENST00000555067 ZNF839A8K0R7 811 aa7.81□□□□□ -1.16
VRK1-203ENST00000555067 WNT9AO14904 365 aa7.81□□□□□ -1.16
VRK1-203ENST00000555067 NAT1P18440 290 aa7.81□□□□□ -1.16
VRK1-203ENST00000555067 PFKPQ01813 784 aa7.81□□□□□ -1.16
VRK1-203ENST00000555067 PAK1Q13153 545 aa7.81□□□□□ -1.16
VRK1-203ENST00000555067 FOXE3Q13461 319 aa7.81□□□□□ -1.16
VRK1-203ENST00000555067 NAALADL2Q58DX5 795 aa7.81□□□□□ -1.16
VRK1-203ENST00000555067 PHF19Q5T6S3 580 aa7.81□□□□□ -1.16
VRK1-203ENST00000555067 SPATC1Q76KD6 591 aa7.81□□□□□ -1.16
VRK1-203ENST00000555067 MTDHQ86UE4 582 aaKnown RBP7.81□□□□□ -1.16
VRK1-203ENST00000555067 NLGN4XQ8N0W4 816 aa7.81□□□□□ -1.16
VRK1-203ENST00000555067 PTPRN2Q92932 1015 aa7.81□□□□□ -1.16
VRK1-203ENST00000555067 AJUBAQ96IF1 538 aa7.81□□□□□ -1.16
VRK1-203ENST00000555067 IPO9Q96P70 1041 aaKnown RBP7.81□□□□□ -1.16
VRK1-203ENST00000555067 CDC6Q99741 560 aa7.81□□□□□ -1.16
VRK1-203ENST00000555067 CCDC113Q9H0I3 377 aa7.81□□□□□ -1.16
VRK1-203ENST00000555067 C11orf21Q9P2W6 132 aa7.81□□□□□ -1.16
VRK1-203ENST00000555067 NPIPB8E9PQR5 432 aa7.8□□□□□ -1.16
VRK1-203ENST00000555067 ADCY3O60266 1144 aa7.8□□□□□ -1.16
VRK1-203ENST00000555067 TGM1P22735 817 aa7.8□□□□□ -1.16
VRK1-203ENST00000555067 SUMO1P63165 101 aaKnown RBP7.8□□□□□ -1.16
VRK1-203ENST00000555067 SMN1Q16637 294 aaKnown RBP7.8□□□□□ -1.16
VRK1-203ENST00000555067 IFNL2Q8IZJ0 200 aa7.8□□□□□ -1.16
VRK1-203ENST00000555067 TRAF6Q9Y4K3 522 aa7.8□□□□□ -1.16
VRK1-203ENST00000555067 TRBV23-1A0A0A0MS06 115 aa7.79□□□□□ -1.16
VRK1-203ENST00000555067 GLRBP48167 497 aa7.79□□□□□ -1.16
VRK1-203ENST00000555067 SSRP1Q08945 709 aaKnown RBP7.79□□□□□ -1.16
VRK1-203ENST00000555067 STPG3Q8N7X2 389 aa7.79□□□□□ -1.16
VRK1-203ENST00000555067 ZNF341Q9BYN7 854 aa7.79□□□□□ -1.16
VRK1-203ENST00000555067 CD244Q9BZW8 370 aa7.79□□□□□ -1.16
VRK1-203ENST00000555067 SEC61A2Q9H9S3 476 aa7.79□□□□□ -1.16
VRK1-203ENST00000555067 SRPK3Q9UPE1 567 aa7.79□□□□□ -1.16
VRK1-203ENST00000555067 SLC4A7Q9Y6M7 1214 aa7.79□□□□□ -1.16
VRK1-203ENST00000555067 H0Y858 1186 aa7.78□□□□□ -1.16
VRK1-203ENST00000555067 ACOT7O00154 380 aa7.78□□□□□ -1.16
VRK1-203ENST00000555067 CNOT4O95628 575 aaKnown RBP7.78□□□□□ -1.16
VRK1-203ENST00000555067 CSF2RBP32927 897 aa7.78□□□□□ -1.16
VRK1-203ENST00000555067 ZBTB38Q8NAP3 1195 aaPredicted RBP7.78□□□□□ -1.16
VRK1-203ENST00000555067 SH3RF2Q8TEC5 729 aa7.78□□□□□ -1.16
VRK1-203ENST00000555067 ZNF503Q96F45 646 aa7.78□□□□□ -1.16
VRK1-203ENST00000555067 KATNBL1Q9H079 304 aa7.78□□□□□ -1.16
VRK1-203ENST00000555067 PPP1R1BQ9UD71 204 aaPredicted RBP7.78□□□□□ -1.16
VRK1-203ENST00000555067 ATP2B1P20020 1258 aa7.77□□□□□ -1.17
VRK1-203ENST00000555067 GJA4P35212 333 aa7.77□□□□□ -1.17
VRK1-203ENST00000555067 DBPQ10586 325 aaPredicted RBP7.77□□□□□ -1.17
VRK1-203ENST00000555067 GPR19Q15760 415 aa7.77□□□□□ -1.17
VRK1-203ENST00000555067 FIGNQ5HY92 759 aa7.77□□□□□ -1.17
VRK1-203ENST00000555067 IGFL4Q6B9Z1 124 aa7.77□□□□□ -1.17
VRK1-203ENST00000555067 ZNF575Q86XF7 245 aa7.77□□□□□ -1.17
VRK1-203ENST00000555067 AMER2Q8N7J2 671 aa7.77□□□□□ -1.17
VRK1-203ENST00000555067 FBXW5Q969U6 566 aa7.77□□□□□ -1.17
VRK1-203ENST00000555067 TANGO6Q9C0B7 1094 aa7.77□□□□□ -1.17
VRK1-203ENST00000555067 SIRPGQ9P1W8 387 aa7.77□□□□□ -1.17
VRK1-203ENST00000555067 TCRBV5S4A2TA0A5A2 114 aa7.76□□□□□ -1.17
VRK1-203ENST00000555067 ARVCFO00192 962 aa7.76□□□□□ -1.17
VRK1-203ENST00000555067 IL18BPO95998 194 aa7.76□□□□□ -1.17
VRK1-203ENST00000555067 PTPN1P18031 435 aaKnown RBP7.76□□□□□ -1.17
VRK1-203ENST00000555067 INHBEP58166 350 aa7.76□□□□□ -1.17
VRK1-203ENST00000555067 GABREP78334 506 aa7.76□□□□□ -1.17
VRK1-203ENST00000555067 LONRF2Q1L5Z9 754 aa7.76□□□□□ -1.17
VRK1-203ENST00000555067 ZNF568Q3ZCX4 644 aa7.76□□□□□ -1.17
VRK1-203ENST00000555067 BTBD8Q5XKL5 378 aa7.76□□□□□ -1.17
VRK1-203ENST00000555067 RNF207Q6ZRF8 634 aa7.76□□□□□ -1.17
VRK1-203ENST00000555067 ARHGAP36Q6ZRI8 547 aa7.76□□□□□ -1.17
VRK1-203ENST00000555067 CHFRQ96EP1 664 aa7.76□□□□□ -1.17
VRK1-203ENST00000555067 TACO1Q9BSH4 297 aaKnown RBP7.76□□□□□ -1.17
VRK1-203ENST00000555067 PFDN2Q9UHV9 154 aa7.76□□□□□ -1.17
VRK1-203ENST00000555067 CCDC85CA6NKD9 419 aa7.75□□□□□ -1.17
VRK1-203ENST00000555067 GSTA4O15217 222 aa7.75□□□□□ -1.17
VRK1-203ENST00000555067 FOXS1O43638 330 aa7.75□□□□□ -1.17
VRK1-203ENST00000555067 CUTAO60888 179 aa7.75□□□□□ -1.17
VRK1-203ENST00000555067 C6orf222P0C671 652 aaPredicted RBP7.75□□□□□ -1.17
VRK1-203ENST00000555067 GUCY1A3Q02108 690 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms