RNA–Protein interactions for RNA: ENST00000555022.5

SYNE2-217, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,396 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-217ENST00000555022 MAP3K13O43283 966 aa9.69□□□□□ -0.86
SYNE2-217ENST00000555022 LRRN2O75325 713 aa9.69□□□□□ -0.86
SYNE2-217ENST00000555022 STAT3P40763 770 aa9.69□□□□□ -0.86
SYNE2-217ENST00000555022 LONRF1Q17RB8 773 aa9.69□□□□□ -0.86
SYNE2-217ENST00000555022 CAPRIN2Q6IMN6 1127 aaKnown RBP9.69□□□□□ -0.86
SYNE2-217ENST00000555022 ZNF746Q6NUN9 644 aaPredicted RBP9.69□□□□□ -0.86
SYNE2-217ENST00000555022 CNNM4Q6P4Q7 775 aa9.69□□□□□ -0.86
SYNE2-217ENST00000555022 ZNF449Q6P9G9 518 aa9.69□□□□□ -0.86
SYNE2-217ENST00000555022 KLHL29Q96CT2 875 aa9.69□□□□□ -0.86
SYNE2-217ENST00000555022 RBM28Q9NW13 759 aaKnown RBP9.69□□□□□ -0.86
SYNE2-217ENST00000555022 SUGT1Q9Y2Z0 365 aa9.69□□□□□ -0.86
SYNE2-217ENST00000555022 PGRMC1O00264 195 aaKnown RBP9.69□□□□□ -0.86
SYNE2-217ENST00000555022 STARD3NLO95772 234 aa9.69□□□□□ -0.86
SYNE2-217ENST00000555022 KRT16P08779 473 aa9.69□□□□□ -0.86
SYNE2-217ENST00000555022 TSPY3P0CV98 308 aa9.69□□□□□ -0.86
SYNE2-217ENST00000555022 TSPY8P0CW00 308 aa9.69□□□□□ -0.86
SYNE2-217ENST00000555022 PLCG2P16885 1265 aa9.69□□□□□ -0.86
SYNE2-217ENST00000555022 HSPA9P38646 679 aaKnown RBP9.69□□□□□ -0.86
SYNE2-217ENST00000555022 SLC29A2Q14542 456 aa9.69□□□□□ -0.86
SYNE2-217ENST00000555022 ARHGAP44Q17R89 818 aa9.69□□□□□ -0.86
SYNE2-217ENST00000555022 NBPF20Q3BBV1 942 aa9.69□□□□□ -0.86
SYNE2-217ENST00000555022 GLE1Q53GS7 698 aaKnown RBP9.69□□□□□ -0.86
SYNE2-217ENST00000555022 C3orf67Q6ZVT6 689 aa9.69□□□□□ -0.86
SYNE2-217ENST00000555022 BZW1Q7L1Q6 419 aaKnown RBP9.69□□□□□ -0.86
SYNE2-217ENST00000555022 ZNF571Q7Z3V5 609 aaPredicted RBP9.69□□□□□ -0.86
SYNE2-217ENST00000555022 LRRC45Q96CN5 670 aa9.69□□□□□ -0.86
SYNE2-217ENST00000555022 TMEM237Q96Q45 408 aa9.69□□□□□ -0.86
SYNE2-217ENST00000555022 PIGSQ96S52 555 aa9.69□□□□□ -0.86
SYNE2-217ENST00000555022 TSG101Q99816 390 aa9.69□□□□□ -0.86
SYNE2-217ENST00000555022 SEMA4AQ9H3S1 761 aa9.69□□□□□ -0.86
SYNE2-217ENST00000555022 ACTR5Q9H9F9 607 aaPredicted RBP9.69□□□□□ -0.86
SYNE2-217ENST00000555022 ERVK-5Q9HDB9 667 aa9.69□□□□□ -0.86
SYNE2-217ENST00000555022 AJAP1Q9UKB5 411 aaPredicted RBP9.69□□□□□ -0.86
SYNE2-217ENST00000555022 INTUQ9ULD6 942 aa9.69□□□□□ -0.86
SYNE2-217ENST00000555022 NIP7Q9Y221 180 aaKnown RBP eCLIP9.69□□□□□ -0.86
SYNE2-217ENST00000555022 PCDHB13Q9Y5F0 798 aa9.69□□□□□ -0.86
SYNE2-217ENST00000555022 MAP3K15Q6ZN16 1313 aa9.68□□□□□ -0.86
SYNE2-217ENST00000555022 MEI1Q5TIA1 1274 aa9.68□□□□□ -0.86
SYNE2-217ENST00000555022 NUGGCQ68CJ6 796 aa9.68□□□□□ -0.86
SYNE2-217ENST00000555022 TMED8Q6PL24 325 aaPredicted RBP9.68□□□□□ -0.86
SYNE2-217ENST00000555022 TAB3Q8N5C8 712 aaPredicted RBP9.68□□□□□ -0.86
SYNE2-217ENST00000555022 ZNF384Q8TF68 577 aa9.68□□□□□ -0.86
SYNE2-217ENST00000555022 CCT6BQ92526 530 aa9.68□□□□□ -0.86
SYNE2-217ENST00000555022 FMO2Q99518 471 aa9.68□□□□□ -0.86
SYNE2-217ENST00000555022 F8VZ95 297 aa9.68□□□□□ -0.86
SYNE2-217ENST00000555022 ATMINO43313 823 aaPredicted RBP9.68□□□□□ -0.86
SYNE2-217ENST00000555022 PIAS1O75925 651 aa9.68□□□□□ -0.86
SYNE2-217ENST00000555022 NOL4O94818 638 aa9.68□□□□□ -0.86
SYNE2-217ENST00000555022 CLSTN1O94985 981 aa9.68□□□□□ -0.86
SYNE2-217ENST00000555022 GH1P01241 217 aa9.68□□□□□ -0.86
SYNE2-217ENST00000555022 TAF11Q15544 211 aa9.68□□□□□ -0.86
SYNE2-217ENST00000555022 NAB2Q15742 525 aa9.68□□□□□ -0.86
SYNE2-217ENST00000555022 ECM1Q16610 540 aa9.68□□□□□ -0.86
SYNE2-217ENST00000555022 PPP4R3AQ6IN85 833 aa9.68□□□□□ -0.86
SYNE2-217ENST00000555022 RUFY4Q6ZNE9 571 aa9.68□□□□□ -0.86
SYNE2-217ENST00000555022 TMC3Q7Z5M5 1100 aa9.68□□□□□ -0.86
SYNE2-217ENST00000555022 PRUNE1Q86TP1 453 aa9.68□□□□□ -0.86
SYNE2-217ENST00000555022 ANKS4BQ8N8V4 417 aa9.68□□□□□ -0.86
SYNE2-217ENST00000555022 FBXO25Q8TCJ0 367 aa9.68□□□□□ -0.86
SYNE2-217ENST00000555022 ANKS1AQ92625 1134 aa9.68□□□□□ -0.86
SYNE2-217ENST00000555022 MMTAG2Q9BU76 263 aaKnown RBP9.68□□□□□ -0.86
SYNE2-217ENST00000555022 PLCB1Q9NQ66 1216 aa9.68□□□□□ -0.86
SYNE2-217ENST00000555022 TRPC6Q9Y210 931 aa9.68□□□□□ -0.86
SYNE2-217ENST00000555022 ATP6V0A2Q9Y487 856 aa9.68□□□□□ -0.86
SYNE2-217ENST00000555022 KLRF2D3W0D1 207 aa9.67□□□□□ -0.86
SYNE2-217ENST00000555022 GNAT2P19087 354 aa9.67□□□□□ -0.86
SYNE2-217ENST00000555022 CALML3P27482 149 aa9.67□□□□□ -0.86
SYNE2-217ENST00000555022 PCK1P35558 622 aa9.67□□□□□ -0.86
SYNE2-217ENST00000555022 MARCKSL1P49006 195 aa9.67□□□□□ -0.86
SYNE2-217ENST00000555022 SNAP25P60880 206 aa9.67□□□□□ -0.86
SYNE2-217ENST00000555022 MECOMQ03112 1051 aa9.67□□□□□ -0.86
SYNE2-217ENST00000555022 GRB10Q13322 594 aa9.67□□□□□ -0.86
SYNE2-217ENST00000555022 CALCRLQ16602 461 aa9.67□□□□□ -0.86
SYNE2-217ENST00000555022 DENND2CQ68D51 928 aa9.67□□□□□ -0.86
SYNE2-217ENST00000555022 ALKBH5Q6P6C2 394 aaKnown RBP9.67□□□□□ -0.86
SYNE2-217ENST00000555022 ISLR2Q6UXK2 745 aa9.67□□□□□ -0.86
SYNE2-217ENST00000555022 LONP2Q86WA8 852 aa9.67□□□□□ -0.86
SYNE2-217ENST00000555022 FMNL3Q8IVF7 1028 aa9.67□□□□□ -0.86
SYNE2-217ENST00000555022 LRRC47Q8N1G4 583 aaKnown RBP9.67□□□□□ -0.86
SYNE2-217ENST00000555022 LARP4BQ92615 738 aaKnown RBP9.67□□□□□ -0.86
SYNE2-217ENST00000555022 C18orf8Q96DM3 657 aa9.67□□□□□ -0.86
SYNE2-217ENST00000555022 ISCUQ9H1K1 167 aa9.67□□□□□ -0.86
SYNE2-217ENST00000555022 PIDD1Q9HB75 910 aa9.67□□□□□ -0.86
SYNE2-217ENST00000555022 UTP11Q9Y3A2 253 aaKnown RBP9.67□□□□□ -0.86
SYNE2-217ENST00000555022 H0YGN5 161 aa9.67□□□□□ -0.86
SYNE2-217ENST00000555022 GJC1P36383 396 aa9.67□□□□□ -0.86
SYNE2-217ENST00000555022 UBE4AQ14139 1066 aa9.67□□□□□ -0.86
SYNE2-217ENST00000555022 WLSQ5T9L3 541 aa9.67□□□□□ -0.86
SYNE2-217ENST00000555022 GLYCTKQ8IVS8 523 aa9.67□□□□□ -0.86
SYNE2-217ENST00000555022 RPGRQ92834 1020 aaKnown RBP9.67□□□□□ -0.86
SYNE2-217ENST00000555022 DDX23Q9BUQ8 820 aaKnown RBP9.67□□□□□ -0.86
SYNE2-217ENST00000555022 NFS1Q9Y697 457 aa9.67□□□□□ -0.86
SYNE2-217ENST00000555022 FLT1P17948 1338 aa9.67□□□□□ -0.86
SYNE2-217ENST00000555022 ARFGEF2Q9Y6D5 1785 aa9.67□□□□□ -0.86
SYNE2-217ENST00000555022 SERPING1P05155 500 aa9.67□□□□□ -0.86
SYNE2-217ENST00000555022 SLC8A1P32418 973 aa9.67□□□□□ -0.86
SYNE2-217ENST00000555022 KIF5BP33176 963 aa9.67□□□□□ -0.86
SYNE2-217ENST00000555022 CYP4A11Q02928 519 aa9.67□□□□□ -0.86
SYNE2-217ENST00000555022 NONOQ15233 471 aaKnown RBP eCLIP9.67□□□□□ -0.86
SYNE2-217ENST00000555022 CCDC84Q86UT8 332 aaPredicted RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms