RNA–Protein interactions for RNA: ENST00000554947.5

SDR39U1-209, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,203 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-209ENST00000554947 MCTP1Q6DN14 999 aa27.33■■□□□ 1.97
SDR39U1-209ENST00000554947 CCDC60Q8IWA6 550 aaPredicted RBP27.33■■□□□ 1.97
SDR39U1-209ENST00000554947 GDF15Q99988 308 aa27.33■■□□□ 1.97
SDR39U1-209ENST00000554947 LBHD1Q9BQE6 289 aaPredicted RBP27.33■■□□□ 1.97
SDR39U1-209ENST00000554947 NOC4LQ9BVI4 516 aaKnown RBP27.33■■□□□ 1.97
SDR39U1-209ENST00000554947 NOD1Q9Y239 953 aa27.33■■□□□ 1.97
SDR39U1-209ENST00000554947 MAFBQ9Y5Q3 323 aaPredicted RBP27.33■■□□□ 1.97
SDR39U1-209ENST00000554947 MARCH6O60337 910 aa27.32■■□□□ 1.96
SDR39U1-209ENST00000554947 PPP1R13LQ8WUF5 828 aa27.32■■□□□ 1.96
SDR39U1-209ENST00000554947 GJA10Q969M2 543 aa27.32■■□□□ 1.96
SDR39U1-209ENST00000554947 CTAGE1Q96RT6 745 aa27.32■■□□□ 1.96
SDR39U1-209ENST00000554947 HIPK3Q9H422 1215 aa27.32■■□□□ 1.96
SDR39U1-209ENST00000554947 VAV3Q9UKW4 847 aa27.32■■□□□ 1.96
SDR39U1-209ENST00000554947 SAMM50Q9Y512 469 aa27.32■■□□□ 1.96
SDR39U1-209ENST00000554947 WNT7AO00755 349 aa27.31■■□□□ 1.96
SDR39U1-209ENST00000554947 BMP8BP34820 402 aa27.31■■□□□ 1.96
SDR39U1-209ENST00000554947 MAGEA10P43363 369 aaPredicted RBP27.31■■□□□ 1.96
SDR39U1-209ENST00000554947 ADAM17P78536 824 aa27.31■■□□□ 1.96
SDR39U1-209ENST00000554947 RBL2Q08999 1139 aa27.31■■□□□ 1.96
SDR39U1-209ENST00000554947 PTK7Q13308 1070 aa27.31■■□□□ 1.96
SDR39U1-209ENST00000554947 TTC38Q5R3I4 469 aa27.31■■□□□ 1.96
SDR39U1-209ENST00000554947 SWSAP1Q6NVH7 229 aa27.31■■□□□ 1.96
SDR39U1-209ENST00000554947 PDXDC2PQ6P474 469 aa27.31■■□□□ 1.96
SDR39U1-209ENST00000554947 MIER3Q7Z3K6 550 aa27.31■■□□□ 1.96
SDR39U1-209ENST00000554947 CCDC155Q8N6L0 562 aa27.31■■□□□ 1.96
SDR39U1-209ENST00000554947 CAGE1Q8TC20 777 aa27.31■■□□□ 1.96
SDR39U1-209ENST00000554947 MTMR9Q96QG7 549 aa27.31■■□□□ 1.96
SDR39U1-209ENST00000554947 IGSF9BQ9UPX0 1349 aa27.31■■□□□ 1.96
SDR39U1-209ENST00000554947 RRN3P2A6NIE6 340 aa27.3■■□□□ 1.96
SDR39U1-209ENST00000554947 PITPNM1O00562 1244 aa27.3■■□□□ 1.96
SDR39U1-209ENST00000554947 ITGB8P26012 769 aa27.3■■□□□ 1.96
SDR39U1-209ENST00000554947 MARK3P27448 753 aa27.3■■□□□ 1.96
SDR39U1-209ENST00000554947 BFSP2Q13515 415 aa27.3■■□□□ 1.96
SDR39U1-209ENST00000554947 PLCB4Q15147 1175 aa27.3■■□□□ 1.96
SDR39U1-209ENST00000554947 RILPL1Q5EBL4 403 aa27.3■■□□□ 1.96
SDR39U1-209ENST00000554947 MFSD5Q6N075 450 aa27.3■■□□□ 1.96
SDR39U1-209ENST00000554947 POTEB3A0JP26 581 aa27.29■■□□□ 1.96
SDR39U1-209ENST00000554947 CHMP2AO43633 222 aa27.29■■□□□ 1.96
SDR39U1-209ENST00000554947 HBP1O60381 514 aa27.29■■□□□ 1.96
SDR39U1-209ENST00000554947 CYP2C9P11712 490 aa27.29■■□□□ 1.96
SDR39U1-209ENST00000554947 PDIA4P13667 645 aaKnown RBP27.29■■□□□ 1.96
SDR39U1-209ENST00000554947 ATP2B1P20020 1258 aa27.29■■□□□ 1.96
SDR39U1-209ENST00000554947 MCM7P33993 719 aa27.29■■□□□ 1.96
SDR39U1-209ENST00000554947 PPFIA1Q13136 1202 aa27.29■■□□□ 1.96
SDR39U1-209ENST00000554947 HIC1Q14526 733 aa27.29■■□□□ 1.96
SDR39U1-209ENST00000554947 POTEBQ6S5H4 581 aa27.29■■□□□ 1.96
SDR39U1-209ENST00000554947 SERINC5Q86VE9 423 aa27.29■■□□□ 1.96
SDR39U1-209ENST00000554947 ATP8B4Q8TF62 1192 aa27.29■■□□□ 1.96
SDR39U1-209ENST00000554947 LMBR1Q8WVP7 490 aa27.29■■□□□ 1.96
SDR39U1-209ENST00000554947 BADQ92934 168 aa27.29■■□□□ 1.96
SDR39U1-209ENST00000554947 ATP6V0A1Q93050 837 aa27.29■■□□□ 1.96
SDR39U1-209ENST00000554947 PRO3102Q9H379 93 aa27.29■■□□□ 1.96
SDR39U1-209ENST00000554947 SETD4Q9NVD3 440 aa27.29■■□□□ 1.96
SDR39U1-209ENST00000554947 GABBR1Q9UBS5 961 aa27.29■■□□□ 1.96
SDR39U1-209ENST00000554947 TANC1Q9C0D5 1861 aa27.29■■□□□ 1.96
SDR39U1-209ENST00000554947 SYT1P21579 422 aa27.28■■□□□ 1.96
SDR39U1-209ENST00000554947 TOB1P50616 345 aaPredicted RBP27.28■■□□□ 1.96
SDR39U1-209ENST00000554947 BRAPQ7Z569 592 aa27.28■■□□□ 1.96
SDR39U1-209ENST00000554947 FAM167AQ96KS9 214 aa27.28■■□□□ 1.96
SDR39U1-209ENST00000554947 PCDHA12Q9UN75 941 aa27.28■■□□□ 1.96
SDR39U1-209ENST00000554947 COL1A2P08123 1366 aa27.27■■□□□ 1.96
SDR39U1-209ENST00000554947 MBLAC1A4D2B0 266 aaPredicted RBP27.27■■□□□ 1.96
SDR39U1-209ENST00000554947 HSP90AA1P07900 732 aaKnown RBP27.27■■□□□ 1.96
SDR39U1-209ENST00000554947 MDM2Q00987 491 aaPredicted RBP27.27■■□□□ 1.96
SDR39U1-209ENST00000554947 SPIRE1Q08AE8 756 aa27.27■■□□□ 1.96
SDR39U1-209ENST00000554947 ZNF174Q15697 407 aa27.27■■□□□ 1.96
SDR39U1-209ENST00000554947 GRIK4Q16099 956 aa27.27■■□□□ 1.96
SDR39U1-209ENST00000554947 TMEM199Q8N511 208 aa27.27■■□□□ 1.96
SDR39U1-209ENST00000554947 BBXQ8WY36 941 aaPredicted RBP27.27■■□□□ 1.96
SDR39U1-209ENST00000554947 PPP1R12CQ9BZL4 782 aa27.27■■□□□ 1.96
SDR39U1-209ENST00000554947 TRPC6Q9Y210 931 aa27.27■■□□□ 1.96
SDR39U1-209ENST00000554947 TREHO43280 583 aa27.26■■□□□ 1.95
SDR39U1-209ENST00000554947 INSRRP14616 1297 aa27.26■■□□□ 1.95
SDR39U1-209ENST00000554947 ATP4AP20648 1035 aa27.26■■□□□ 1.95
SDR39U1-209ENST00000554947 ZNF200P98182 395 aaPredicted RBP27.26■■□□□ 1.95
SDR39U1-209ENST00000554947 DHX38Q92620 1227 aaKnown RBP27.26■■□□□ 1.95
SDR39U1-209ENST00000554947 TMEM60Q9H2L4 133 aa27.26■■□□□ 1.95
SDR39U1-209ENST00000554947 TTC12Q9H892 705 aaPredicted RBP27.26■■□□□ 1.95
SDR39U1-209ENST00000554947 EVPLQ92817 2033 aa27.25■■□□□ 1.95
SDR39U1-209ENST00000554947 VPS37CA5D8V6 355 aaPredicted RBP27.25■■□□□ 1.95
SDR39U1-209ENST00000554947 LAD1O00515 517 aa27.25■■□□□ 1.95
SDR39U1-209ENST00000554947 CAND2O75155 1236 aa27.25■■□□□ 1.95
SDR39U1-209ENST00000554947 RPLP2P05387 115 aaKnown RBP27.25■■□□□ 1.95
SDR39U1-209ENST00000554947 OR52Z1P0C646 297 aa27.25■■□□□ 1.95
SDR39U1-209ENST00000554947 CYP2C18P33260 490 aa27.25■■□□□ 1.95
SDR39U1-209ENST00000554947 FPGSQ05932 587 aa27.25■■□□□ 1.95
SDR39U1-209ENST00000554947 PPIGQ13427 754 aaKnown RBP eCLIP27.25■■□□□ 1.953e-7■■■□□ 16.1
SDR39U1-209ENST00000554947 EPHA7Q15375 998 aa27.25■■□□□ 1.95
SDR39U1-209ENST00000554947 ZNF484Q5JVG2 852 aa27.25■■□□□ 1.95
SDR39U1-209ENST00000554947 TAF2Q6P1X5 1199 aa27.25■■□□□ 1.95
SDR39U1-209ENST00000554947 CHRDL2Q6WN34 429 aa27.25■■□□□ 1.95
SDR39U1-209ENST00000554947 RETREG2Q8NC44 543 aa27.25■■□□□ 1.95
SDR39U1-209ENST00000554947 FOXD4L1Q9NU39 408 aa27.25■■□□□ 1.95
SDR39U1-209ENST00000554947 A0A1W2PPC1 479 aa27.24■■□□□ 1.95
SDR39U1-209ENST00000554947 EML1O00423 815 aa27.24■■□□□ 1.95
SDR39U1-209ENST00000554947 DKC1O60832 514 aaKnown RBP eCLIP27.24■■□□□ 1.95
SDR39U1-209ENST00000554947 PARNO95453 639 aaKnown RBP27.24■■□□□ 1.95
SDR39U1-209ENST00000554947 TRIM71Q2Q1W2 868 aaKnown RBP27.24■■□□□ 1.95
SDR39U1-209ENST00000554947 RPAINQ86UA6 219 aa27.24■■□□□ 1.95
SDR39U1-209ENST00000554947 CKAP2LQ8IYA6 745 aa27.24■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms