RNA–Protein interactions for RNA: ENST00000554607.1

FOXA1-204, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 789 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-204ENST00000554607 RC3H2Q9HBD1 1191 aaKnown RBP27.8■■■□□ 2.04
FOXA1-204ENST00000554607 MYO7AQ13402 2215 aa27.8■■■□□ 2.04
FOXA1-204ENST00000554607 LINC00271P0C7V0 271 aa27.79■■■□□ 2.04
FOXA1-204ENST00000554607 ITGB5P18084 799 aa27.79■■■□□ 2.04
FOXA1-204ENST00000554607 MARK3P27448 753 aa27.79■■■□□ 2.04
FOXA1-204ENST00000554607 LTBRP36941 435 aa27.79■■■□□ 2.04
FOXA1-204ENST00000554607 MTMR1Q13613 665 aa27.79■■■□□ 2.04
FOXA1-204ENST00000554607 ZNF689Q96CS4 500 aaPredicted RBP27.79■■■□□ 2.04
FOXA1-204ENST00000554607 MYL10Q9BUA6 226 aa27.79■■■□□ 2.04
FOXA1-204ENST00000554607 CDY2AQ9Y6F7 541 aa27.79■■■□□ 2.04
FOXA1-204ENST00000554607 RRN3P2A6NIE6 340 aa27.78■■■□□ 2.04
FOXA1-204ENST00000554607 IER5Q5VY09 327 aa27.78■■■□□ 2.04
FOXA1-204ENST00000554607 NFXL1Q6ZNB6 911 aa27.78■■■□□ 2.04
FOXA1-204ENST00000554607 POP1Q99575 1024 aaKnown RBP27.78■■■□□ 2.04
FOXA1-204ENST00000554607 UBIAD1Q9Y5Z9 338 aa27.78■■■□□ 2.04
FOXA1-204ENST00000554607 SQORQ9Y6N5 450 aa27.78■■■□□ 2.04
FOXA1-204ENST00000554607 SPDYE3A6NKU9 549 aa27.77■■■□□ 2.04
FOXA1-204ENST00000554607 DGKIO75912 1065 aa27.77■■■□□ 2.04
FOXA1-204ENST00000554607 CALM1P0DP23 149 aa27.77■■■□□ 2.04
FOXA1-204ENST00000554607 CALM2P0DP24 149 aa27.77■■■□□ 2.04
FOXA1-204ENST00000554607 CALM3P0DP25 149 aa27.77■■■□□ 2.04
FOXA1-204ENST00000554607 MRPS6P82932 125 aaKnown RBP27.77■■■□□ 2.04
FOXA1-204ENST00000554607 HYAL1Q12794 435 aa27.77■■■□□ 2.04
FOXA1-204ENST00000554607 MARCH8Q5T0T0 291 aa27.77■■■□□ 2.04
FOXA1-204ENST00000554607 SRBD1Q8N5C6 995 aaKnown RBP27.77■■■□□ 2.04
FOXA1-204ENST00000554607 FTHL17Q9BXU8 183 aa27.77■■■□□ 2.04
FOXA1-204ENST00000554607 TTC3P53804 2025 aa27.77■■■□□ 2.04
FOXA1-204ENST00000554607 CCDC69A6NI79 296 aa27.76■■■□□ 2.03
FOXA1-204ENST00000554607 PRC1O43663 620 aa27.76■■■□□ 2.03
FOXA1-204ENST00000554607 MMP1P03956 469 aa27.76■■■□□ 2.03
FOXA1-204ENST00000554607 SMAD2Q15796 467 aaKnown RBP27.76■■■□□ 2.03
FOXA1-204ENST00000554607 NAALADL2Q58DX5 795 aa27.76■■■□□ 2.03
FOXA1-204ENST00000554607 P2RX5Q93086 422 aa27.76■■■□□ 2.03
FOXA1-204ENST00000554607 PPP2R3CQ969Q6 453 aa27.76■■■□□ 2.03
FOXA1-204ENST00000554607 TMEM87BQ96K49 555 aa27.76■■■□□ 2.03
FOXA1-204ENST00000554607 KCNH6Q9H252 994 aa27.76■■■□□ 2.03
FOXA1-204ENST00000554607 JADE2Q9NQC1 790 aa27.76■■■□□ 2.03
FOXA1-204ENST00000554607 RBM8AQ9Y5S9 174 aaKnown RBP27.76■■■□□ 2.03
FOXA1-204ENST00000554607 PIEZO1Q92508 2521 aa27.75■■■□□ 2.03
FOXA1-204ENST00000554607 PLEKHA8P1O95397 391 aa27.75■■■□□ 2.03
FOXA1-204ENST00000554607 MCM5P33992 734 aa27.75■■■□□ 2.03
FOXA1-204ENST00000554607 IGBP1P78318 339 aa27.75■■■□□ 2.03
FOXA1-204ENST00000554607 AZI2Q9H6S1 392 aa27.75■■■□□ 2.03
FOXA1-204ENST00000554607 M0QZ92 97 aa27.74■■■□□ 2.03
FOXA1-204ENST00000554607 MBTPS2O43462 519 aa27.74■■■□□ 2.03
FOXA1-204ENST00000554607 CMTR2Q8IYT2 770 aaKnown RBP27.74■■■□□ 2.03
FOXA1-204ENST00000554607 IGFLR1Q9H665 355 aa27.74■■■□□ 2.03
FOXA1-204ENST00000554607 AGO3Q9H9G7 860 aaKnown RBP27.74■■■□□ 2.03
FOXA1-204ENST00000554607 PKD2L1Q9P0L9 805 aa27.74■■■□□ 2.03
FOXA1-204ENST00000554607 PCDHA6Q9UN73 950 aa27.74■■■□□ 2.03
FOXA1-204ENST00000554607 PLAGL2Q9UPG8 496 aa27.74■■■□□ 2.03
FOXA1-204ENST00000554607 PCDHA8Q9Y5H6 950 aa27.74■■■□□ 2.03
FOXA1-204ENST00000554607 INSRRP14616 1297 aa27.73■■■□□ 2.03
FOXA1-204ENST00000554607 CD52P31358 61 aa27.73■■■□□ 2.03
FOXA1-204ENST00000554607 IRS1P35568 1242 aa27.73■■■□□ 2.03
FOXA1-204ENST00000554607 SMAD4Q13485 552 aaKnown RBP27.73■■■□□ 2.03
FOXA1-204ENST00000554607 NPAS4Q8IUM7 802 aa27.73■■■□□ 2.03
FOXA1-204ENST00000554607 FAM49AQ9H0Q0 323 aaPredicted RBP27.73■■■□□ 2.03
FOXA1-204ENST00000554607 JPH1Q9HDC5 661 aaPredicted RBP27.73■■■□□ 2.03
FOXA1-204ENST00000554607 SH2B2O14492 632 aaPredicted RBP27.72■■■□□ 2.03
FOXA1-204ENST00000554607 STAG3L1P0CL83 205 aa27.72■■■□□ 2.03
FOXA1-204ENST00000554607 LIFRP42702 1097 aa27.72■■■□□ 2.03
FOXA1-204ENST00000554607 DLX2Q07687 328 aaPredicted RBP27.72■■■□□ 2.03
FOXA1-204ENST00000554607 CLUL1Q15846 466 aa27.72■■■□□ 2.03
FOXA1-204ENST00000554607 UBE2SQ16763 222 aa27.72■■■□□ 2.03
FOXA1-204ENST00000554607 ALYREFQ86V81 257 aaKnown RBP27.72■■■□□ 2.03
FOXA1-204ENST00000554607 CMTR1Q8N1G2 835 aaKnown RBP27.72■■■□□ 2.03
FOXA1-204ENST00000554607 ALG13Q9NP73 1137 aaKnown RBP27.72■■■□□ 2.03
FOXA1-204ENST00000554607 SLC9A2Q9UBY0 812 aa27.72■■■□□ 2.03
FOXA1-204ENST00000554607 CD207Q9UJ71 328 aa27.72■■■□□ 2.03
FOXA1-204ENST00000554607 TRPV2Q9Y5S1 764 aa27.72■■■□□ 2.03
FOXA1-204ENST00000554607 ADAM15Q13444 863 aa27.71■■■□□ 2.03
FOXA1-204ENST00000554607 FAM43BQ6ZT52 329 aaPredicted RBP27.71■■■□□ 2.03
FOXA1-204ENST00000554607 TRPC6Q9Y210 931 aa27.71■■■□□ 2.03
FOXA1-204ENST00000554607 PCDHA2Q9Y5H9 948 aa27.71■■■□□ 2.03
FOXA1-204ENST00000554607 SLC12A7Q9Y666 1083 aa27.71■■■□□ 2.03
FOXA1-204ENST00000554607 MRPL42Q9Y6G3 142 aaKnown RBP27.71■■■□□ 2.03
FOXA1-204ENST00000554607 RTN4RL1Q86UN2 441 aaPredicted RBP27.7■■■□□ 2.02
FOXA1-204ENST00000554607 CRIPAKQ8N1N5 446 aa27.7■■■□□ 2.02
FOXA1-204ENST00000554607 NME8Q8N427 588 aa27.7■■■□□ 2.02
FOXA1-204ENST00000554607 LINC01599Q8WXQ3 324 aa27.7■■■□□ 2.02
FOXA1-204ENST00000554607 PCYT2Q99447 389 aa27.7■■■□□ 2.02
FOXA1-204ENST00000554607 SDF4Q9BRK5 362 aa27.7■■■□□ 2.02
FOXA1-204ENST00000554607 ATG2AQ2TAZ0 1938 aa27.7■■■□□ 2.02
FOXA1-204ENST00000554607 TBX10O75333 385 aa27.69■■■□□ 2.02
FOXA1-204ENST00000554607 RXRAP19793 462 aa27.69■■■□□ 2.02
FOXA1-204ENST00000554607 PAK2Q13177 524 aa27.69■■■□□ 2.02
FOXA1-204ENST00000554607 CAMK1Q14012 370 aa27.69■■■□□ 2.02
FOXA1-204ENST00000554607 PLPPR4Q7Z2D5 763 aa27.69■■■□□ 2.02
FOXA1-204ENST00000554607 TEX2Q8IWB9 1127 aa27.69■■■□□ 2.02
FOXA1-204ENST00000554607 MXRA8Q9BRK3 442 aa27.69■■■□□ 2.02
FOXA1-204ENST00000554607 CELF4Q9BZC1 486 aaKnown RBP27.69■■■□□ 2.02
FOXA1-204ENST00000554607 KCNH7Q9NS40 1196 aa27.69■■■□□ 2.02
FOXA1-204ENST00000554607 PADI3Q9ULW8 664 aa27.69■■■□□ 2.02
FOXA1-204ENST00000554607 STXBP3O00186 592 aa27.68■■■□□ 2.02
FOXA1-204ENST00000554607 CSPG5O95196 566 aa27.68■■■□□ 2.02
FOXA1-204ENST00000554607 GTF2F1P35269 517 aaKnown RBP eCLIP27.68■■■□□ 2.02
FOXA1-204ENST00000554607 NDUFV1P49821 464 aa27.68■■■□□ 2.02
FOXA1-204ENST00000554607 STAT5BP51692 787 aa27.68■■■□□ 2.02
FOXA1-204ENST00000554607 HERC4Q5GLZ8 1057 aaPredicted RBP27.68■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms