RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 SMCO2A6NFE2 343 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 ZBTB22O15209 634 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 DCTN3O75935 186 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 INMTO95050 263 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 ITGA3P26006 1051 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 VEPH1Q14D04 833 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 STXBP2Q15833 593 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 GLE1Q53GS7 698 aaKnown RBP3.56□□□□□ -1.84
SYNE2-212ENST00000554584 CARD6Q9BX69 1037 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 MOV10L1Q9BXT6 1211 aaKnown RBP3.56□□□□□ -1.84
SYNE2-212ENST00000554584 REXO4Q9GZR2 422 aaKnown RBP3.56□□□□□ -1.84
SYNE2-212ENST00000554584 TNNC2P02585 160 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 ALDH3A1P30838 453 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 INPP5BP32019 993 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 SOX10P56693 466 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 UBE2HP62256 183 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 CYP27A1Q02318 531 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 JAMLQ86YT9 394 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 LRRN4Q8WUT4 740 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 EPC1Q9H2F5 836 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 TBK1Q9UHD2 729 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 CCDC171Q6TFL3 1326 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 CEP85Q6P2H3 762 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 POLNQ7Z5Q5 900 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 ENAMQ9NRM1 1142 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 GJB4Q9NTQ9 266 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.56□□□□□ -1.84
SYNE2-212ENST00000554584 WDR64B1ANS9 1081 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 CCNT1O60563 726 aaKnown RBP3.56□□□□□ -1.84
SYNE2-212ENST00000554584 KRT1P04264 644 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 NBPF7P0C2Y1 421 aaPredicted RBP3.56□□□□□ -1.84
SYNE2-212ENST00000554584 PPP3CCP48454 512 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 LMNTD2Q8IXW0 634 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 OR6B3Q8NGW1 331 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 PNMA5Q96PV4 448 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 SHCBP1LQ9BZQ2 653 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 SH2B1Q9NRF2 756 aaPredicted RBP3.56□□□□□ -1.84
SYNE2-212ENST00000554584 THEGQ9P2T0 379 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 ABCB11O95342 1321 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 I3L4J1 428 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 ZNF449Q6P9G9 518 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 DNAAF3Q8N9W5 541 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 FEM1CQ96JP0 617 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 BAIAP2L1Q9UHR4 511 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 NUDT5Q9UKK9 219 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 RPH3AQ9Y2J0 694 aaPredicted RBP3.56□□□□□ -1.84
SYNE2-212ENST00000554584 GAPVD1Q14C86 1478 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 TTC21BQ7Z4L5 1316 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 STXBP3O00186 592 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 SART1O43290 800 aaKnown RBP3.56□□□□□ -1.84
SYNE2-212ENST00000554584 LRRN2O75325 713 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 CPB1P15086 417 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 FAPQ12884 760 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 EDRF1Q3B7T1 1238 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 CC2D1AQ6P1N0 951 aaPredicted RBP3.56□□□□□ -1.84
SYNE2-212ENST00000554584 DACH2Q96NX9 599 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 ZNF24P17028 368 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 CCNA2P20248 432 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 UVSSAQ2YD98 709 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 RILPL1Q5EBL4 403 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 NOL9Q5SY16 702 aaKnown RBP3.56□□□□□ -1.84
SYNE2-212ENST00000554584 C16orf46Q6P387 395 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 AFAP1L2Q8N4X5 818 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 BCL2L12Q9HB09 334 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 UBA6A0AVT1 1052 aaPredicted RBP3.56□□□□□ -1.84
SYNE2-212ENST00000554584 ARIH2O95376 493 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 CALCAP01258 141 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 TECP42680 631 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 RGS7P49802 495 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 CATSPER4Q7RTX7 472 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 ZC3H18Q86VM9 953 aaKnown RBP3.56□□□□□ -1.84
SYNE2-212ENST00000554584 PLA2G4DQ86XP0 818 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 FAM9CQ8IZT9 166 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 NUP93Q8N1F7 819 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 RUBCNQ92622 972 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 TBC1D32Q96NH3 1257 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 EIF2AK3Q9NZJ5 1116 aaKnown RBP3.56□□□□□ -1.84
SYNE2-212ENST00000554584 SAMD15Q9P1V8 674 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 PRG3Q9Y2Y8 225 aaPredicted RBP3.56□□□□□ -1.84
SYNE2-212ENST00000554584 ADCY9O60503 1353 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 SEPT2Q15019 361 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 HADHQ16836 314 aaKnown RBP3.56□□□□□ -1.84
SYNE2-212ENST00000554584 TRIM60Q495X7 471 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 PDZD4Q76G19 769 aaPredicted RBP3.56□□□□□ -1.84
SYNE2-212ENST00000554584 OTUD6AQ7L8S5 288 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 ZHX2Q9Y6X8 837 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 TDRD6O60522 2096 aaKnown RBP3.56□□□□□ -1.84
SYNE2-212ENST00000554584 ARHGAP10A1A4S6 786 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 NMT2O60551 498 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 GRAP2O75791 330 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 MAGEA1P43355 309 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 ANKRD40Q6AI12 368 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 DARS2Q6PI48 645 aaKnown RBP3.56□□□□□ -1.84
SYNE2-212ENST00000554584 RRAGAQ7L523 313 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 RAB44Q7Z6P3 723 aaPredicted RBP3.56□□□□□ -1.84
SYNE2-212ENST00000554584 HESX1Q9UBX0 185 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 ZKSCAN5Q9Y2L8 839 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 PYGMP11217 842 aa3.55□□□□□ -1.84
SYNE2-212ENST00000554584 TNNI3P19429 210 aa3.55□□□□□ -1.84
SYNE2-212ENST00000554584 STXBP1P61764 594 aaKnown RBP3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms