RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 PAG1Q9NWQ8 432 aa7.59□□□□□ -1.19
SCFD1-212ENST00000554486 DENND2AQ9ULE3 1009 aa7.59□□□□□ -1.19
SCFD1-212ENST00000554486 JAG2Q9Y219 1238 aa7.59□□□□□ -1.19
SCFD1-212ENST00000554486 CYP26A1O43174 497 aa7.58□□□□□ -1.2
SCFD1-212ENST00000554486 FRAT2O75474 233 aaPredicted RBP7.58□□□□□ -1.2
SCFD1-212ENST00000554486 ARID5AQ03989 594 aa7.58□□□□□ -1.2
SCFD1-212ENST00000554486 PDE4BQ07343 736 aa7.58□□□□□ -1.2
SCFD1-212ENST00000554486 CDK5R2Q13319 367 aa7.58□□□□□ -1.2
SCFD1-212ENST00000554486 GNL2Q13823 731 aaKnown RBP7.58□□□□□ -1.2
SCFD1-212ENST00000554486 GPR162Q16538 588 aa7.58□□□□□ -1.2
SCFD1-212ENST00000554486 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.58□□□□□ -1.2
SCFD1-212ENST00000554486 RBBP8NLQ8NC74 664 aaPredicted RBP7.58□□□□□ -1.2
SCFD1-212ENST00000554486 RILPL2Q969X0 211 aa7.58□□□□□ -1.2
SCFD1-212ENST00000554486 EVI5LQ96CN4 794 aa7.58□□□□□ -1.2
SCFD1-212ENST00000554486 DPH2Q9BQC3 489 aaPredicted RBP7.58□□□□□ -1.2
SCFD1-212ENST00000554486 SALL1Q9NSC2 1324 aa7.57□□□□□ -1.2
SCFD1-212ENST00000554486 MEIS3P2A8K0S8 358 aa7.57□□□□□ -1.2
SCFD1-212ENST00000554486 WNT11O96014 354 aa7.57□□□□□ -1.2
SCFD1-212ENST00000554486 CST3P01034 146 aaPredicted RBP7.57□□□□□ -1.2
SCFD1-212ENST00000554486 CHGBP05060 677 aa7.57□□□□□ -1.2
SCFD1-212ENST00000554486 FOSL1P15407 271 aa7.57□□□□□ -1.2
SCFD1-212ENST00000554486 DACT2Q5SW24 774 aa7.57□□□□□ -1.2
SCFD1-212ENST00000554486 PRAMEF13Q5VWM6 474 aa7.57□□□□□ -1.2
SCFD1-212ENST00000554486 TTLL5Q6EMB2 1281 aa7.57□□□□□ -1.2
SCFD1-212ENST00000554486 ARMCX6Q7L4S7 300 aa7.57□□□□□ -1.2
SCFD1-212ENST00000554486 DTX1Q86Y01 620 aa7.57□□□□□ -1.2
SCFD1-212ENST00000554486 NIM1KQ8IY84 436 aa7.57□□□□□ -1.2
SCFD1-212ENST00000554486 CNTROBQ8N137 903 aa7.57□□□□□ -1.2
SCFD1-212ENST00000554486 CERS5Q8N5B7 392 aa7.57□□□□□ -1.2
SCFD1-212ENST00000554486 FAM169BQ8N8A8 192 aa7.57□□□□□ -1.2
SCFD1-212ENST00000554486 KBTBD3Q8NAB2 608 aa7.57□□□□□ -1.2
SCFD1-212ENST00000554486 WDR66Q8TBY9 1149 aa7.57□□□□□ -1.2
SCFD1-212ENST00000554486 MXD3Q9BW11 206 aa7.57□□□□□ -1.2
SCFD1-212ENST00000554486 MYH2Q9UKX2 1941 aa7.56□□□□□ -1.2
SCFD1-212ENST00000554486 FZD9O00144 591 aa7.56□□□□□ -1.2
SCFD1-212ENST00000554486 RAD17O75943 681 aa7.56□□□□□ -1.2
SCFD1-212ENST00000554486 VIL1P09327 827 aaKnown RBP7.56□□□□□ -1.2
SCFD1-212ENST00000554486 CHMLP26374 656 aa7.56□□□□□ -1.2
SCFD1-212ENST00000554486 PRDX5P30044 214 aa7.56□□□□□ -1.2
SCFD1-212ENST00000554486 GIPRP48546 466 aa7.56□□□□□ -1.2
SCFD1-212ENST00000554486 FKBP1AP62942 108 aaKnown RBP7.56□□□□□ -1.2
SCFD1-212ENST00000554486 CXCL9Q07325 125 aa7.56□□□□□ -1.2
SCFD1-212ENST00000554486 TTF1Q15361 905 aaPredicted RBP7.56□□□□□ -1.2
SCFD1-212ENST00000554486 CYP27C1Q4G0S4 372 aa7.56□□□□□ -1.2
SCFD1-212ENST00000554486 STRIP1Q5VSL9 837 aa7.56□□□□□ -1.2
SCFD1-212ENST00000554486 SLC6A19Q695T7 634 aa7.56□□□□□ -1.2
SCFD1-212ENST00000554486 OVOS1Q6IE37 1185 aa7.56□□□□□ -1.2
SCFD1-212ENST00000554486 RUFY4Q6ZNE9 571 aa7.56□□□□□ -1.2
SCFD1-212ENST00000554486 CDC37L1Q7L3B6 337 aa7.56□□□□□ -1.2
SCFD1-212ENST00000554486 KCT2Q8NC54 265 aa7.56□□□□□ -1.2
SCFD1-212ENST00000554486 RIN3Q8TB24 985 aa7.56□□□□□ -1.2
SCFD1-212ENST00000554486 ZNF384Q8TF68 577 aa7.56□□□□□ -1.2
SCFD1-212ENST00000554486 JDP2Q8WYK2 163 aa7.56□□□□□ -1.2
SCFD1-212ENST00000554486 ATG4CQ96DT6 458 aa7.56□□□□□ -1.2
SCFD1-212ENST00000554486 SRRTQ9BXP5 876 aaKnown RBP7.56□□□□□ -1.2
SCFD1-212ENST00000554486 SSU72Q9NP77 194 aaKnown RBP7.56□□□□□ -1.2
SCFD1-212ENST00000554486 ABCF2Q9UG63 623 aa7.56□□□□□ -1.2
SCFD1-212ENST00000554486 TIAM2Q8IVF5 1701 aa7.55□□□□□ -1.2
SCFD1-212ENST00000554486 TCRBV5S4A2TA0A5A2 114 aa7.55□□□□□ -1.2
SCFD1-212ENST00000554486 PSMD14O00487 310 aa7.55□□□□□ -1.2
SCFD1-212ENST00000554486 CDC45O75419 566 aa7.55□□□□□ -1.2
SCFD1-212ENST00000554486 LEFTY1O75610 366 aa7.55□□□□□ -1.2
SCFD1-212ENST00000554486 IDH1O75874 414 aaKnown RBP7.55□□□□□ -1.2
SCFD1-212ENST00000554486 LRIG2O94898 1065 aa7.55□□□□□ -1.2
SCFD1-212ENST00000554486 SLITRK5O94991 958 aa7.55□□□□□ -1.2
SCFD1-212ENST00000554486 ACRP10323 421 aa7.55□□□□□ -1.2
SCFD1-212ENST00000554486 PDE6AP16499 860 aa7.55□□□□□ -1.2
SCFD1-212ENST00000554486 SPINK2P20155 84 aa7.55□□□□□ -1.2
SCFD1-212ENST00000554486 ADD2P35612 726 aa7.55□□□□□ -1.2
SCFD1-212ENST00000554486 MFSD14BQ5SR56 506 aa7.55□□□□□ -1.2
SCFD1-212ENST00000554486 CDCP2Q5VXM1 449 aa7.55□□□□□ -1.2
SCFD1-212ENST00000554486 OGFOD3Q6PK18 319 aa7.55□□□□□ -1.2
SCFD1-212ENST00000554486 FAM214BQ7L5A3 538 aa7.55□□□□□ -1.2
SCFD1-212ENST00000554486 LSRQ86X29 649 aaPredicted RBP7.55□□□□□ -1.2
SCFD1-212ENST00000554486 SLFN12Q8IYM2 578 aa7.55□□□□□ -1.2
SCFD1-212ENST00000554486 TBC1D22AQ8WUA7 517 aa7.55□□□□□ -1.2
SCFD1-212ENST00000554486 PPP1R13LQ8WUF5 828 aa7.55□□□□□ -1.2
SCFD1-212ENST00000554486 TMEM40Q8WWA1 233 aa7.55□□□□□ -1.2
SCFD1-212ENST00000554486 FERD3LQ96RJ6 166 aa7.55□□□□□ -1.2
SCFD1-212ENST00000554486 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.55□□□□□ -1.2
SCFD1-212ENST00000554486 FSD1Q9BTV5 496 aa7.55□□□□□ -1.2
SCFD1-212ENST00000554486 FOXQ1Q9C009 403 aa7.55□□□□□ -1.2
SCFD1-212ENST00000554486 CNNM2Q9H8M5 875 aa7.55□□□□□ -1.2
SCFD1-212ENST00000554486 RNF181Q9P0P0 153 aa7.55□□□□□ -1.2
SCFD1-212ENST00000554486 GMIPQ9P107 970 aa7.55□□□□□ -1.2
SCFD1-212ENST00000554486 LRP2BPQ9P2M1 347 aa7.55□□□□□ -1.2
SCFD1-212ENST00000554486 KLHL3Q9UH77 587 aa7.55□□□□□ -1.2
SCFD1-212ENST00000554486 MAST2Q6P0Q8 1798 aa7.55□□□□□ -1.2
SCFD1-212ENST00000554486 RFX7Q2KHR2 1363 aa7.55□□□□□ -1.2
SCFD1-212ENST00000554486 UTRNP46939 3433 aa7.55□□□□□ -1.2
SCFD1-212ENST00000554486 ZNF541Q9H0D2 1346 aa7.54□□□□□ -1.2
SCFD1-212ENST00000554486 ADAMTSL1Q8N6G6 1762 aa7.54□□□□□ -1.2
SCFD1-212ENST00000554486 FAM170BA6NMN3 283 aa7.54□□□□□ -1.2
SCFD1-212ENST00000554486 RNF113AO15541 343 aaKnown RBP7.54□□□□□ -1.2
SCFD1-212ENST00000554486 ETFBP38117 255 aa7.54□□□□□ -1.2
SCFD1-212ENST00000554486 MECOMQ03112 1051 aa7.54□□□□□ -1.2
SCFD1-212ENST00000554486 MAP3K12Q12852 859 aa7.54□□□□□ -1.2
SCFD1-212ENST00000554486 SLC9C2Q5TAH2 1124 aa7.54□□□□□ -1.2
SCFD1-212ENST00000554486 SPTY2D1Q68D10 685 aaPredicted RBP7.54□□□□□ -1.2
SCFD1-212ENST00000554486 CIAPIN1Q6FI81 312 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms