RNA–Protein interactions for RNA: ENST00000554384.1

CHD8-207, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-207ENST00000554384 HIP1RO75146 1068 aa7.04□□□□□ -1.28
CHD8-207ENST00000554384 GLI1P08151 1106 aa7.04□□□□□ -1.28
CHD8-207ENST00000554384 MMEP08473 750 aa7.04□□□□□ -1.28
CHD8-207ENST00000554384 JUNBP17275 347 aaPredicted RBP7.04□□□□□ -1.28
CHD8-207ENST00000554384 PMLP29590 882 aa7.04□□□□□ -1.28
CHD8-207ENST00000554384 THBS2P35442 1172 aa7.04□□□□□ -1.28
CHD8-207ENST00000554384 SMAD3P84022 425 aaKnown RBP7.04□□□□□ -1.28
CHD8-207ENST00000554384 EXOSC10Q01780 885 aaKnown RBP7.04□□□□□ -1.28
CHD8-207ENST00000554384 NR1I3Q14994 352 aa7.04□□□□□ -1.28
CHD8-207ENST00000554384 SMAD2Q15796 467 aaKnown RBP7.04□□□□□ -1.28
CHD8-207ENST00000554384 DDB1Q16531 1140 aa7.04□□□□□ -1.28
CHD8-207ENST00000554384 CATSPEREQ5SY80 951 aa7.04□□□□□ -1.28
CHD8-207ENST00000554384 CYP4F22Q6NT55 531 aa7.04□□□□□ -1.28
CHD8-207ENST00000554384 TMC6Q7Z403 805 aa7.04□□□□□ -1.28
CHD8-207ENST00000554384 ZNF605Q86T29 641 aa7.04□□□□□ -1.28
CHD8-207ENST00000554384 ZSWIM9Q86XI8 627 aa7.04□□□□□ -1.28
CHD8-207ENST00000554384 ERCC4Q92889 916 aaPredicted RBP7.04□□□□□ -1.28
CHD8-207ENST00000554384 PCIF1Q9H4Z3 704 aa7.04□□□□□ -1.28
CHD8-207ENST00000554384 ZMAT4Q9H898 229 aa7.04□□□□□ -1.28
CHD8-207ENST00000554384 KCNH7Q9NS40 1196 aa7.04□□□□□ -1.28
CHD8-207ENST00000554384 TYW1Q9NV66 732 aaKnown RBP7.04□□□□□ -1.28
CHD8-207ENST00000554384 TRHDEQ9UKU6 1024 aa7.04□□□□□ -1.28
CHD8-207ENST00000554384 CARMIL2Q6F5E8 1435 aa7.03□□□□□ -1.28
CHD8-207ENST00000554384 LRG1P02750 347 aa7.03□□□□□ -1.28
CHD8-207ENST00000554384 VIPR1P32241 457 aa7.03□□□□□ -1.28
CHD8-207ENST00000554384 MAPKAPK2P49137 400 aa7.03□□□□□ -1.28
CHD8-207ENST00000554384 NCKAP1LP55160 1127 aa7.03□□□□□ -1.28
CHD8-207ENST00000554384 YBX1P67809 324 aaKnown RBP7.03□□□□□ -1.28
CHD8-207ENST00000554384 ZNF200P98182 395 aaPredicted RBP7.03□□□□□ -1.28
CHD8-207ENST00000554384 TERF2Q15554 542 aa7.03□□□□□ -1.28
CHD8-207ENST00000554384 PAN2Q504Q3 1202 aaKnown RBP7.03□□□□□ -1.28
CHD8-207ENST00000554384 NECAB2Q7Z6G3 386 aa7.03□□□□□ -1.28
CHD8-207ENST00000554384 PHOSPHO1Q8TCT1 267 aa7.03□□□□□ -1.28
CHD8-207ENST00000554384 RTF1Q92541 710 aaKnown RBP7.03□□□□□ -1.28
CHD8-207ENST00000554384 SLC6A17Q9H1V8 727 aa7.03□□□□□ -1.28
CHD8-207ENST00000554384 SEMA4AQ9H3S1 761 aa7.03□□□□□ -1.28
CHD8-207ENST00000554384 TOPORSQ9NS56 1045 aaPredicted RBP7.03□□□□□ -1.28
CHD8-207ENST00000554384 WASF3Q9UPY6 502 aa7.03□□□□□ -1.28
CHD8-207ENST00000554384 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.02□□□□□ -1.29
CHD8-207ENST00000554384 S100BP04271 92 aaPredicted RBP7.02□□□□□ -1.29
CHD8-207ENST00000554384 OCRLQ01968 901 aa7.02□□□□□ -1.29
CHD8-207ENST00000554384 ZC3H14Q6PJT7 736 aaKnown RBP7.02□□□□□ -1.29
CHD8-207ENST00000554384 TRIM48Q8IWZ4 208 aa7.02□□□□□ -1.29
CHD8-207ENST00000554384 FAM168AQ92567 244 aa7.02□□□□□ -1.29
CHD8-207ENST00000554384 ALG3Q92685 438 aa7.02□□□□□ -1.29
CHD8-207ENST00000554384 TSPAN17Q96FV3 270 aa7.02□□□□□ -1.29
CHD8-207ENST00000554384 DIRC2Q96SL1 478 aa7.02□□□□□ -1.29
CHD8-207ENST00000554384 YIPF4Q9BSR8 244 aa7.02□□□□□ -1.29
CHD8-207ENST00000554384 KRTAP4-11Q9BYQ6 195 aa7.02□□□□□ -1.29
CHD8-207ENST00000554384 PUS7LQ9H0K6 701 aaKnown RBP7.02□□□□□ -1.29
CHD8-207ENST00000554384 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.02□□□□□ -1.29
CHD8-207ENST00000554384 GABRDO14764 452 aa7.01□□□□□ -1.29
CHD8-207ENST00000554384 FOXP2O15409 715 aa7.01□□□□□ -1.29
CHD8-207ENST00000554384 ALDH1L1O75891 902 aa7.01□□□□□ -1.29
CHD8-207ENST00000554384 ZBTB7AO95365 584 aa7.01□□□□□ -1.29
CHD8-207ENST00000554384 FAHP16930 419 aa7.01□□□□□ -1.29
CHD8-207ENST00000554384 MC4RP32245 332 aa7.01□□□□□ -1.29
CHD8-207ENST00000554384 MC3RP41968 323 aa7.01□□□□□ -1.29
CHD8-207ENST00000554384 ABCB5Q2M3G0 1257 aa7.01□□□□□ -1.29
CHD8-207ENST00000554384 ODR4Q5SWX8 454 aa7.01□□□□□ -1.29
CHD8-207ENST00000554384 CC2D1AQ6P1N0 951 aaPredicted RBP7.01□□□□□ -1.29
CHD8-207ENST00000554384 PRR23BQ6ZRT6 265 aa7.01□□□□□ -1.29
CHD8-207ENST00000554384 CBARPQ8N350 705 aaPredicted RBP7.01□□□□□ -1.29
CHD8-207ENST00000554384 ASB15Q8WXK1 588 aa7.01□□□□□ -1.29
CHD8-207ENST00000554384 JDP2Q8WYK2 163 aa7.01□□□□□ -1.29
CHD8-207ENST00000554384 C14orf119Q9NWQ9 140 aa7.01□□□□□ -1.29
CHD8-207ENST00000554384 TNKSO95271 1327 aa7.01□□□□□ -1.29
CHD8-207ENST00000554384 ASGR2P07307 311 aa7□□□□□ -1.29
CHD8-207ENST00000554384 IARSP41252 1262 aaKnown RBP7□□□□□ -1.29
CHD8-207ENST00000554384 SCAND1P57086 179 aa7□□□□□ -1.29
CHD8-207ENST00000554384 ERVK-21P61565 698 aa7□□□□□ -1.29
CHD8-207ENST00000554384 SRSF3P84103 164 aaKnown RBP7□□□□□ -1.29
CHD8-207ENST00000554384 SLC9A5Q14940 896 aa7□□□□□ -1.29
CHD8-207ENST00000554384 PDCD1Q15116 288 aa7□□□□□ -1.29
CHD8-207ENST00000554384 PHF19Q5T6S3 580 aa7□□□□□ -1.29
CHD8-207ENST00000554384 MPZL3Q6UWV2 235 aa7□□□□□ -1.29
CHD8-207ENST00000554384 STK32CQ86UX6 486 aa7□□□□□ -1.29
CHD8-207ENST00000554384 AHCYL2Q96HN2 611 aaKnown RBP7□□□□□ -1.29
CHD8-207ENST00000554384 ZNF496Q96IT1 587 aaPredicted RBP7□□□□□ -1.29
CHD8-207ENST00000554384 C16orf92Q96LL3 132 aa7□□□□□ -1.29
CHD8-207ENST00000554384 GBP4Q96PP9 640 aa7□□□□□ -1.29
CHD8-207ENST00000554384 CEP89Q96ST8 783 aa7□□□□□ -1.29
CHD8-207ENST00000554384 SGPP1Q9BX95 441 aa7□□□□□ -1.29
CHD8-207ENST00000554384 ZNF552Q9H707 407 aaPredicted RBP7□□□□□ -1.29
CHD8-207ENST00000554384 SLC39A2Q9NP94 309 aa7□□□□□ -1.29
CHD8-207ENST00000554384 ACSS2Q9NR19 701 aa7□□□□□ -1.29
CHD8-207ENST00000554384 NUB1Q9Y5A7 615 aa7□□□□□ -1.29
CHD8-207ENST00000554384 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7□□□□□ -1.29
CHD8-207ENST00000554384 MYOCOSA0A1B0GUC4 107 aa6.99□□□□□ -1.29
CHD8-207ENST00000554384 PRAMEF22A3QJZ6 481 aa6.99□□□□□ -1.29
CHD8-207ENST00000554384 ULK1O75385 1050 aa6.99□□□□□ -1.29
CHD8-207ENST00000554384 PARNO95453 639 aaKnown RBP6.99□□□□□ -1.29
CHD8-207ENST00000554384 MT-CO1P00395 513 aa6.99□□□□□ -1.29
CHD8-207ENST00000554384 GJA4P35212 333 aa6.99□□□□□ -1.29
CHD8-207ENST00000554384 SESN3P58005 492 aa6.99□□□□□ -1.29
CHD8-207ENST00000554384 TTF1Q15361 905 aaPredicted RBP6.99□□□□□ -1.29
CHD8-207ENST00000554384 CR1LQ2VPA4 569 aa6.99□□□□□ -1.29
CHD8-207ENST00000554384 SYDE2Q5VT97 1194 aa6.99□□□□□ -1.29
CHD8-207ENST00000554384 PRAMEF18Q5VWM3 479 aa6.99□□□□□ -1.29
CHD8-207ENST00000554384 TEPPQ6URK8 271 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms