RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 CCDC196A0A1B0GTZ2 297 aa21.42■■□□□ 1.02
CPSF2-203ENST00000554290 NFASCO94856 1347 aa21.42■■□□□ 1.02
CPSF2-203ENST00000554290 GHRP10912 638 aa21.42■■□□□ 1.02
CPSF2-203ENST00000554290 AP3B2Q13367 1082 aa21.42■■□□□ 1.02
CPSF2-203ENST00000554290 DNAJB3Q8WWF6 145 aa21.42■■□□□ 1.02
CPSF2-203ENST00000554290 INSRRP14616 1297 aa21.41■■□□□ 1.02
CPSF2-203ENST00000554290 ZNF76P36508 570 aa21.41■■□□□ 1.02
CPSF2-203ENST00000554290 ACTR2P61160 394 aa21.41■■□□□ 1.02
CPSF2-203ENST00000554290 IGBP1P78318 339 aa21.41■■□□□ 1.02
CPSF2-203ENST00000554290 PTPROQ16827 1216 aa21.41■■□□□ 1.02
CPSF2-203ENST00000554290 EPC2Q52LR7 807 aa21.41■■□□□ 1.02
CPSF2-203ENST00000554290 MARCH8Q5T0T0 291 aa21.41■■□□□ 1.02
CPSF2-203ENST00000554290 CYP2W1Q8TAV3 490 aa21.41■■□□□ 1.02
CPSF2-203ENST00000554290 PGBD1Q96JS3 809 aa21.41■■□□□ 1.02
CPSF2-203ENST00000554290 TRPC6Q9Y210 931 aa21.41■■□□□ 1.02
CPSF2-203ENST00000554290 COL4A4P53420 1690 aaPredicted RBP21.4■■□□□ 1.02
CPSF2-203ENST00000554290 MICAL3Q7RTP6 2002 aa21.4■■□□□ 1.02
CPSF2-203ENST00000554290 MEIS1O00470 390 aa21.4■■□□□ 1.02
CPSF2-203ENST00000554290 ARP10275 920 aa21.4■■□□□ 1.02
CPSF2-203ENST00000554290 CDC27P30260 824 aa21.4■■□□□ 1.02
CPSF2-203ENST00000554290 SREBF1P36956 1147 aa21.4■■□□□ 1.02
CPSF2-203ENST00000554290 MGAT3Q09327 533 aa21.4■■□□□ 1.02
CPSF2-203ENST00000554290 LPIN1Q14693 890 aa21.4■■□□□ 1.02
CPSF2-203ENST00000554290 IER5Q5VY09 327 aa21.4■■□□□ 1.02
CPSF2-203ENST00000554290 PLPPR4Q7Z2D5 763 aa21.4■■□□□ 1.02
CPSF2-203ENST00000554290 MRPL38Q96DV4 380 aaKnown RBP21.4■■□□□ 1.02
CPSF2-203ENST00000554290 IL17RAQ96F46 866 aa21.4■■□□□ 1.02
CPSF2-203ENST00000554290 NECAB3Q96P71 396 aaPredicted RBP21.4■■□□□ 1.02
CPSF2-203ENST00000554290 PCYT2Q99447 389 aa21.4■■□□□ 1.02
CPSF2-203ENST00000554290 AGO4Q9HCK5 861 aaKnown RBP21.4■■□□□ 1.02
CPSF2-203ENST00000554290 FAM217BQ9NTX9 383 aaPredicted RBP21.4■■□□□ 1.02
CPSF2-203ENST00000554290 REV3LO60673 3130 aa21.4■■□□□ 1.02
CPSF2-203ENST00000554290 METAP2P50579 478 aaKnown RBP eCLIP21.39■■□□□ 1.01
CPSF2-203ENST00000554290 STAT5BP51692 787 aa21.39■■□□□ 1.01
CPSF2-203ENST00000554290 MRPS6P82932 125 aaKnown RBP21.39■■□□□ 1.01
CPSF2-203ENST00000554290 FBXO47Q5MNV8 452 aa21.39■■□□□ 1.01
CPSF2-203ENST00000554290 MCTP2Q6DN12 878 aa21.39■■□□□ 1.01
CPSF2-203ENST00000554290 TMEM192Q8IY95 271 aa21.39■■□□□ 1.01
CPSF2-203ENST00000554290 TMEM260Q9NX78 707 aa21.39■■□□□ 1.01
CPSF2-203ENST00000554290 CDY2AQ9Y6F7 541 aa21.39■■□□□ 1.01
CPSF2-203ENST00000554290 H3BNC9 293 aa21.38■■□□□ 1.01
CPSF2-203ENST00000554290 M0QZ92 97 aa21.38■■□□□ 1.01
CPSF2-203ENST00000554290 ADD1P35611 737 aaKnown RBP21.38■■□□□ 1.01
CPSF2-203ENST00000554290 CLK2P49760 499 aaKnown RBP21.38■■□□□ 1.01
CPSF2-203ENST00000554290 SLC26A2P50443 739 aa21.38■■□□□ 1.01
CPSF2-203ENST00000554290 GPM6BQ13491 265 aa21.38■■□□□ 1.01
CPSF2-203ENST00000554290 PFKFB3Q16875 520 aaPredicted RBP21.38■■□□□ 1.01
CPSF2-203ENST00000554290 TSHZ1Q6ZSZ6 1077 aa21.38■■□□□ 1.01
CPSF2-203ENST00000554290 NIPA1Q7RTP0 329 aa21.38■■□□□ 1.01
CPSF2-203ENST00000554290 FIBCD1Q8N539 461 aa21.38■■□□□ 1.01
CPSF2-203ENST00000554290 FAM49AQ9H0Q0 323 aaPredicted RBP21.38■■□□□ 1.01
CPSF2-203ENST00000554290 SQORQ9Y6N5 450 aa21.38■■□□□ 1.01
CPSF2-203ENST00000554290 SIP14410 1827 aa21.37■■□□□ 1.01
CPSF2-203ENST00000554290 ENPP3O14638 875 aa21.37■■□□□ 1.01
CPSF2-203ENST00000554290 SCG2P13521 617 aa21.37■■□□□ 1.01
CPSF2-203ENST00000554290 APOBRQ0VD83 1088 aa21.37■■□□□ 1.01
CPSF2-203ENST00000554290 ITGB3BPQ13352 177 aaPredicted RBP21.37■■□□□ 1.01
CPSF2-203ENST00000554290 PLCB4Q15147 1175 aa21.37■■□□□ 1.01
CPSF2-203ENST00000554290 BLOC1S2Q6QNY1 142 aa21.37■■□□□ 1.01
CPSF2-203ENST00000554290 Q6ZUG5 572 aa21.37■■□□□ 1.01
CPSF2-203ENST00000554290 CCDC12Q8WUD4 166 aaPredicted RBP21.37■■□□□ 1.01
CPSF2-203ENST00000554290 KCNB2Q92953 911 aa21.37■■□□□ 1.01
CPSF2-203ENST00000554290 JAKMIP1Q96N16 626 aaKnown RBP21.37■■□□□ 1.01
CPSF2-203ENST00000554290 UBE2ZQ9H832 354 aaPredicted RBP21.37■■□□□ 1.01
CPSF2-203ENST00000554290 PCDHA2Q9Y5H9 948 aa21.37■■□□□ 1.01
CPSF2-203ENST00000554290 KAT6AQ92794 2004 aa21.37■■□□□ 1.01
CPSF2-203ENST00000554290 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.36■■□□□ 1.01
CPSF2-203ENST00000554290 POTEB3A0JP26 581 aa21.36■■□□□ 1.01
CPSF2-203ENST00000554290 ATG7O95352 703 aa21.36■■□□□ 1.01
CPSF2-203ENST00000554290 CPA1P15085 419 aa21.36■■□□□ 1.01
CPSF2-203ENST00000554290 HSPA4P34932 840 aa21.36■■□□□ 1.01
CPSF2-203ENST00000554290 TIGD5Q53EQ6 642 aa21.36■■□□□ 1.01
CPSF2-203ENST00000554290 JAKMIP3Q5VZ66 844 aa21.36■■□□□ 1.01
CPSF2-203ENST00000554290 FAM160B1Q5W0V3 765 aa21.36■■□□□ 1.01
CPSF2-203ENST00000554290 POTEBQ6S5H4 581 aa21.36■■□□□ 1.01
CPSF2-203ENST00000554290 PLA2G4DQ86XP0 818 aa21.36■■□□□ 1.01
CPSF2-203ENST00000554290 BRF1Q92994 677 aa21.36■■□□□ 1.01
CPSF2-203ENST00000554290 C6orf50Q9HD87 102 aa21.36■■□□□ 1.01
CPSF2-203ENST00000554290 COL4A6Q14031 1691 aa21.36■■□□□ 1.01
CPSF2-203ENST00000554290 ESYT2A0FGR8 921 aa21.35■■□□□ 1.01
CPSF2-203ENST00000554290 BACH1O14867 736 aa21.35■■□□□ 1.01
CPSF2-203ENST00000554290 NME8Q8N427 588 aa21.35■■□□□ 1.01
CPSF2-203ENST00000554290 ZBTB10Q96DT7 871 aa21.35■■□□□ 1.01
CPSF2-203ENST00000554290 FTHL17Q9BXU8 183 aa21.35■■□□□ 1.01
CPSF2-203ENST00000554290 ZMYND12Q9H0C1 365 aa21.35■■□□□ 1.01
CPSF2-203ENST00000554290 RWDD3Q9Y3V2 267 aa21.35■■□□□ 1.01
CPSF2-203ENST00000554290 TRPV2Q9Y5S1 764 aa21.35■■□□□ 1.01
CPSF2-203ENST00000554290 SNX14Q9Y5W7 946 aa21.35■■□□□ 1.01
CPSF2-203ENST00000554290 ADGRA3Q8IWK6 1321 aa21.34■■□□□ 1.01
CPSF2-203ENST00000554290 TCF20Q9UGU0 1960 aaKnown RBP21.34■■□□□ 1.01
CPSF2-203ENST00000554290 IGKV6D-21A0A0A0MT36 114 aa21.34■■□□□ 1.01
CPSF2-203ENST00000554290 SMIM35A0A1B0GVV1 85 aa21.34■■□□□ 1.01
CPSF2-203ENST00000554290 RB1P06400 928 aa21.34■■□□□ 1.01
CPSF2-203ENST00000554290 CYP3A4P08684 503 aa21.34■■□□□ 1.01
CPSF2-203ENST00000554290 CD52P31358 61 aa21.34■■□□□ 1.01
CPSF2-203ENST00000554290 CTNNB1P35222 781 aa21.34■■□□□ 1.01
CPSF2-203ENST00000554290 AKAP17AQ02040 695 aaKnown RBP21.34■■□□□ 1.01
CPSF2-203ENST00000554290 BANK1Q8NDB2 785 aa21.34■■□□□ 1.01
CPSF2-203ENST00000554290 TRAPPC12Q8WVT3 735 aa21.34■■□□□ 1.01
CPSF2-203ENST00000554290 CCDC136Q96JN2 1154 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms