RNA–Protein interactions for RNA: ENST00000553945.1

NEK9-203, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 786 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-203ENST00000553945 TREHO43280 583 aa26.29■■□□□ 1.8
NEK9-203ENST00000553945 CHMP2AO43633 222 aa26.29■■□□□ 1.8
NEK9-203ENST00000553945 GJB2P29033 226 aa26.29■■□□□ 1.8
NEK9-203ENST00000553945 PPFIA1Q13136 1202 aa26.29■■□□□ 1.8
NEK9-203ENST00000553945 GNL2Q13823 731 aaKnown RBP26.29■■□□□ 1.8
NEK9-203ENST00000553945 SHHQ15465 462 aa26.29■■□□□ 1.8
NEK9-203ENST00000553945 C9orf50Q5SZB4 431 aa26.29■■□□□ 1.8
NEK9-203ENST00000553945 SWSAP1Q6NVH7 229 aa26.29■■□□□ 1.8
NEK9-203ENST00000553945 CCDC60Q8IWA6 550 aaPredicted RBP26.29■■□□□ 1.8
NEK9-203ENST00000553945 CAGE1Q8TC20 777 aa26.29■■□□□ 1.8
NEK9-203ENST00000553945 LMBR1Q8WVP7 490 aa26.29■■□□□ 1.8
NEK9-203ENST00000553945 UNC45AQ9H3U1 944 aa26.29■■□□□ 1.8
NEK9-203ENST00000553945 ZNF302Q9NR11 478 aa26.29■■□□□ 1.8
NEK9-203ENST00000553945 SMC3Q9UQE7 1217 aa26.29■■□□□ 1.8
NEK9-203ENST00000553945 TRPC6Q9Y210 931 aa26.29■■□□□ 1.8
NEK9-203ENST00000553945 ZSCAN21Q9Y5A6 473 aaPredicted RBP26.29■■□□□ 1.8
NEK9-203ENST00000553945 PCDHA10Q9Y5I2 948 aa26.29■■□□□ 1.8
NEK9-203ENST00000553945 NRCAMQ92823 1304 aa26.29■■□□□ 1.8
NEK9-203ENST00000553945 WDR64B1ANS9 1081 aa26.28■■□□□ 1.8
NEK9-203ENST00000553945 MARCH6O60337 910 aa26.28■■□□□ 1.8
NEK9-203ENST00000553945 PSMD10O75832 226 aa26.28■■□□□ 1.8
NEK9-203ENST00000553945 PSAPP07602 524 aa26.28■■□□□ 1.8
NEK9-203ENST00000553945 ACRP10323 421 aa26.28■■□□□ 1.8
NEK9-203ENST00000553945 PDXDC2PQ6P474 469 aa26.28■■□□□ 1.8
NEK9-203ENST00000553945 SERINC5Q86VE9 423 aa26.28■■□□□ 1.8
NEK9-203ENST00000553945 FOXP1Q9H334 677 aaPredicted RBP26.28■■□□□ 1.8
NEK9-203ENST00000553945 IL23AQ9NPF7 189 aa26.28■■□□□ 1.8
NEK9-203ENST00000553945 LAMA2P24043 3122 aaKnown RBP26.27■■□□□ 1.8
NEK9-203ENST00000553945 SLC26A2P50443 739 aa26.27■■□□□ 1.8
NEK9-203ENST00000553945 IGBP1P78318 339 aa26.27■■□□□ 1.8
NEK9-203ENST00000553945 PLCB4Q15147 1175 aa26.27■■□□□ 1.8
NEK9-203ENST00000553945 GRIK4Q16099 956 aa26.27■■□□□ 1.8
NEK9-203ENST00000553945 POTEDQ86YR6 584 aa26.27■■□□□ 1.8
NEK9-203ENST00000553945 AFAP1L1Q8TED9 768 aa26.27■■□□□ 1.8
NEK9-203ENST00000553945 TNPO1Q92973 898 aaKnown RBP26.27■■□□□ 1.8
NEK9-203ENST00000553945 WNT8BQ93098 351 aa26.27■■□□□ 1.8
NEK9-203ENST00000553945 FAM20AQ96MK3 541 aa26.27■■□□□ 1.8
NEK9-203ENST00000553945 DISC1Q9NRI5 854 aa26.27■■□□□ 1.8
NEK9-203ENST00000553945 TANC1Q9C0D5 1861 aa26.27■■□□□ 1.8
NEK9-203ENST00000553945 KAT6AQ92794 2004 aa26.27■■□□□ 1.8
NEK9-203ENST00000553945 IQCF3P0C7M6 154 aa26.26■■□□□ 1.79
NEK9-203ENST00000553945 CKBP12277 381 aa26.26■■□□□ 1.79
NEK9-203ENST00000553945 TRIM71Q2Q1W2 868 aaKnown RBP26.26■■□□□ 1.79
NEK9-203ENST00000553945 KCNMB3Q9NPA1 279 aa26.26■■□□□ 1.79
NEK9-203ENST00000553945 GABBR1Q9UBS5 961 aa26.26■■□□□ 1.79
NEK9-203ENST00000553945 POTEB3A0JP26 581 aa26.25■■□□□ 1.79
NEK9-203ENST00000553945 INSRRP14616 1297 aa26.25■■□□□ 1.79
NEK9-203ENST00000553945 SELPP16109 830 aa26.25■■□□□ 1.79
NEK9-203ENST00000553945 ATP2B1P20020 1258 aa26.25■■□□□ 1.79
NEK9-203ENST00000553945 SFNP31947 248 aa26.25■■□□□ 1.79
NEK9-203ENST00000553945 JAK3P52333 1124 aa26.25■■□□□ 1.79
NEK9-203ENST00000553945 ADAM17P78536 824 aa26.25■■□□□ 1.79
NEK9-203ENST00000553945 POTEBQ6S5H4 581 aa26.25■■□□□ 1.79
NEK9-203ENST00000553945 LRRC8DQ7L1W4 858 aa26.25■■□□□ 1.79
NEK9-203ENST00000553945 C16orf59Q7L2K0 433 aa26.25■■□□□ 1.79
NEK9-203ENST00000553945 CKAP2LQ8IYA6 745 aa26.25■■□□□ 1.79
NEK9-203ENST00000553945 RPUSD2Q8IZ73 545 aaKnown RBP26.25■■□□□ 1.79
NEK9-203ENST00000553945 BUD13Q9BRD0 619 aaKnown RBP eCLIP26.25■■□□□ 1.79
NEK9-203ENST00000553945 TRIOBPQ9H2D6 2365 aa26.25■■□□□ 1.79
NEK9-203ENST00000553945 SCN5AQ14524 2016 aa26.24■■□□□ 1.79
NEK9-203ENST00000553945 TBX3O15119 743 aa26.24■■□□□ 1.79
NEK9-203ENST00000553945 THPOP40225 353 aa26.24■■□□□ 1.79
NEK9-203ENST00000553945 RBL2Q08999 1139 aa26.24■■□□□ 1.79
NEK9-203ENST00000553945 CUL4AQ13619 759 aa26.24■■□□□ 1.79
NEK9-203ENST00000553945 MIER3Q7Z3K6 550 aa26.24■■□□□ 1.79
NEK9-203ENST00000553945 DEFB128Q7Z7B8 93 aa26.24■■□□□ 1.79
NEK9-203ENST00000553945 TUBE1Q9UJT0 475 aa26.24■■□□□ 1.79
NEK9-203ENST00000553945 MAFBQ9Y5Q3 323 aaPredicted RBP26.24■■□□□ 1.79
NEK9-203ENST00000553945 RRN3P2A6NIE6 340 aa26.23■■□□□ 1.79
NEK9-203ENST00000553945 WNT7AO00755 349 aa26.23■■□□□ 1.79
NEK9-203ENST00000553945 BAG4O95429 457 aaKnown RBP26.23■■□□□ 1.79
NEK9-203ENST00000553945 RFC2P35250 354 aa26.23■■□□□ 1.79
NEK9-203ENST00000553945 TMEM240Q5SV17 173 aa26.23■■□□□ 1.79
NEK9-203ENST00000553945 ZNF618Q5T7W0 954 aa26.23■■□□□ 1.79
NEK9-203ENST00000553945 PSRC1Q6PGN9 363 aaPredicted RBP26.23■■□□□ 1.79
NEK9-203ENST00000553945 ZNF365Q70YC5 407 aa26.23■■□□□ 1.79
NEK9-203ENST00000553945 TRMT1LQ7Z2T5 733 aaKnown RBP26.23■■□□□ 1.79
NEK9-203ENST00000553945 NOSTRINQ8IVI9 506 aa26.23■■□□□ 1.79
NEK9-203ENST00000553945 RDM1Q8NG50 284 aa26.23■■□□□ 1.79
NEK9-203ENST00000553945 ATP8B4Q8TF62 1192 aa26.23■■□□□ 1.79
NEK9-203ENST00000553945 TRAPPC12Q8WVT3 735 aa26.23■■□□□ 1.79
NEK9-203ENST00000553945 HAS1Q92839 578 aa26.23■■□□□ 1.79
NEK9-203ENST00000553945 RNPC3Q96LT9 517 aaKnown RBP26.23■■□□□ 1.79
NEK9-203ENST00000553945 MYH9P35579 1960 aaKnown RBP26.23■■□□□ 1.79
NEK9-203ENST00000553945 WDR81Q562E7 1941 aa26.22■■□□□ 1.79
NEK9-203ENST00000553945 KIF28PB7ZC32 967 aa26.22■■□□□ 1.79
NEK9-203ENST00000553945 H3BQV1 296 aa26.22■■□□□ 1.79
NEK9-203ENST00000553945 HBP1O60381 514 aa26.22■■□□□ 1.79
NEK9-203ENST00000553945 NEMFO60524 1076 aa26.22■■□□□ 1.79
NEK9-203ENST00000553945 ATP4AP20648 1035 aa26.22■■□□□ 1.79
NEK9-203ENST00000553945 CALCRLQ16602 461 aa26.22■■□□□ 1.79
NEK9-203ENST00000553945 MARCH8Q5T0T0 291 aa26.22■■□□□ 1.79
NEK9-203ENST00000553945 B3GNT9Q6UX72 402 aa26.22■■□□□ 1.79
NEK9-203ENST00000553945 SLFN12Q8IYM2 578 aa26.22■■□□□ 1.79
NEK9-203ENST00000553945 VAV3Q9UKW4 847 aa26.22■■□□□ 1.79
NEK9-203ENST00000553945 IGSF9BQ9UPX0 1349 aa26.21■■□□□ 1.79
NEK9-203ENST00000553945 FGBP02675 491 aa26.21■■□□□ 1.79
NEK9-203ENST00000553945 MCTP1Q6DN14 999 aa26.21■■□□□ 1.79
NEK9-203ENST00000553945 RUFY4Q6ZNE9 571 aa26.21■■□□□ 1.79
NEK9-203ENST00000553945 ZBTB10Q96DT7 871 aa26.21■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 212.7 ms