RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 BRD7Q9NPI1 651 aa9.68□□□□□ -0.86
GTF2A1-203ENST00000553612 GRK2P25098 689 aa9.68□□□□□ -0.86
GTF2A1-203ENST00000553612 TMEM266Q2M3C6 531 aa9.68□□□□□ -0.86
GTF2A1-203ENST00000553612 MMEL1Q495T6 779 aa9.68□□□□□ -0.86
GTF2A1-203ENST00000553612 TMEM259Q4ZIN3 620 aa9.68□□□□□ -0.86
GTF2A1-203ENST00000553612 RASGRP2Q7LDG7 609 aa9.68□□□□□ -0.86
GTF2A1-203ENST00000553612 KCNG4Q8TDN1 519 aa9.68□□□□□ -0.86
GTF2A1-203ENST00000553612 MMS19Q96T76 1030 aa9.68□□□□□ -0.86
GTF2A1-203ENST00000553612 HAUS8Q9BT25 410 aa9.68□□□□□ -0.86
GTF2A1-203ENST00000553612 DAPK2Q9UIK4 370 aa9.68□□□□□ -0.86
GTF2A1-203ENST00000553612 PON2Q15165 354 aa9.68□□□□□ -0.86
GTF2A1-203ENST00000553612 RILPL1Q5EBL4 403 aa9.68□□□□□ -0.86
GTF2A1-203ENST00000553612 TMEM63BQ5T3F8 832 aa9.68□□□□□ -0.86
GTF2A1-203ENST00000553612 ARHGEF25Q86VW2 580 aa9.68□□□□□ -0.86
GTF2A1-203ENST00000553612 ATP6V1E2Q96A05 226 aa9.68□□□□□ -0.86
GTF2A1-203ENST00000553612 ALG1Q9BT22 464 aa9.68□□□□□ -0.86
GTF2A1-203ENST00000553612 TXNDC16Q9P2K2 825 aa9.68□□□□□ -0.86
GTF2A1-203ENST00000553612 TFR2Q9UP52 801 aa9.68□□□□□ -0.86
GTF2A1-203ENST00000553612 UBOX5O94941 541 aa9.68□□□□□ -0.86
GTF2A1-203ENST00000553612 CYP2E1P05181 493 aaPredicted RBP9.68□□□□□ -0.86
GTF2A1-203ENST00000553612 COPB2P35606 906 aa9.68□□□□□ -0.86
GTF2A1-203ENST00000553612 CCT4P50991 539 aaKnown RBP9.68□□□□□ -0.86
GTF2A1-203ENST00000553612 CNPY1Q3B7I2 92 aa9.68□□□□□ -0.86
GTF2A1-203ENST00000553612 TOM1L2Q6ZVM7 507 aa9.68□□□□□ -0.86
GTF2A1-203ENST00000553612 SCAIQ8N9R8 606 aa9.68□□□□□ -0.86
GTF2A1-203ENST00000553612 KRT23Q9C075 422 aa9.68□□□□□ -0.86
GTF2A1-203ENST00000553612 ZNF287Q9HBT7 754 aa9.68□□□□□ -0.86
GTF2A1-203ENST00000553612 TFAP4Q01664 338 aa9.68□□□□□ -0.86
GTF2A1-203ENST00000553612 PPARAQ07869 468 aa9.68□□□□□ -0.86
GTF2A1-203ENST00000553612 P3H4Q92791 437 aa9.68□□□□□ -0.86
GTF2A1-203ENST00000553612 SNRKQ9NRH2 765 aa9.68□□□□□ -0.86
GTF2A1-203ENST00000553612 NDE1Q9NXR1 346 aa9.68□□□□□ -0.86
GTF2A1-203ENST00000553612 UTP11Q9Y3A2 253 aaKnown RBP9.68□□□□□ -0.86
GTF2A1-203ENST00000553612 PGM3O95394 542 aa9.67□□□□□ -0.86
GTF2A1-203ENST00000553612 GSTA5Q7RTV2 222 aa9.67□□□□□ -0.86
GTF2A1-203ENST00000553612 UCMAQ8WVF2 138 aa9.67□□□□□ -0.86
GTF2A1-203ENST00000553612 DDX17Q92841 729 aaKnown RBP9.67□□□□□ -0.86
GTF2A1-203ENST00000553612 CTNNAL1Q9UBT7 734 aa9.67□□□□□ -0.86
GTF2A1-203ENST00000553612 MROH2BQ7Z745 1585 aa9.67□□□□□ -0.86
GTF2A1-203ENST00000553612 CAPN9O14815 690 aa9.67□□□□□ -0.86
GTF2A1-203ENST00000553612 SPAG7O75391 227 aa9.67□□□□□ -0.86
GTF2A1-203ENST00000553612 ANXA1P04083 346 aa9.67□□□□□ -0.86
GTF2A1-203ENST00000553612 HSMCR30P0CW71 290 aa9.67□□□□□ -0.86
GTF2A1-203ENST00000553612 KRT2P35908 639 aa9.67□□□□□ -0.86
GTF2A1-203ENST00000553612 CASP5P51878 434 aa9.67□□□□□ -0.86
GTF2A1-203ENST00000553612 TAF1DQ9H5J8 278 aaPredicted RBP9.67□□□□□ -0.86
GTF2A1-203ENST00000553612 MRPL44Q9H9J2 332 aaKnown RBP9.67□□□□□ -0.86
GTF2A1-203ENST00000553612 GMEB1Q9Y692 573 aa9.67□□□□□ -0.86
GTF2A1-203ENST00000553612 H7C0C1 242 aa9.67□□□□□ -0.86
GTF2A1-203ENST00000553612 INO80B-WBP1J3KQ70 363 aa9.67□□□□□ -0.86
GTF2A1-203ENST00000553612 GYG2O15488 501 aa9.67□□□□□ -0.86
GTF2A1-203ENST00000553612 TSC22D2O75157 780 aa9.67□□□□□ -0.86
GTF2A1-203ENST00000553612 CDH3P22223 829 aa9.67□□□□□ -0.86
GTF2A1-203ENST00000553612 ANXA13P27216 316 aa9.67□□□□□ -0.86
GTF2A1-203ENST00000553612 ADD2P35612 726 aa9.67□□□□□ -0.86
GTF2A1-203ENST00000553612 CLEC4GQ6UXB4 293 aa9.67□□□□□ -0.86
GTF2A1-203ENST00000553612 NUTM2AQ8IVF1 878 aaPredicted RBP9.67□□□□□ -0.86
GTF2A1-203ENST00000553612 ACSBG1Q96GR2 724 aa9.67□□□□□ -0.86
GTF2A1-203ENST00000553612 FAM161BQ96MY7 647 aa9.67□□□□□ -0.86
GTF2A1-203ENST00000553612 TBCBQ99426 244 aa9.67□□□□□ -0.86
GTF2A1-203ENST00000553612 RETREG1Q9H6L5 497 aa9.67□□□□□ -0.86
GTF2A1-203ENST00000553612 COQ3Q9NZJ6 369 aa9.67□□□□□ -0.86
GTF2A1-203ENST00000553612 PA2G4Q9UQ80 394 aaKnown RBP9.67□□□□□ -0.86
GTF2A1-203ENST00000553612 RASSF9O75901 435 aa9.67□□□□□ -0.86
GTF2A1-203ENST00000553612 GLRX3O76003 335 aaKnown RBP9.67□□□□□ -0.86
GTF2A1-203ENST00000553612 MOCS3O95396 460 aa9.67□□□□□ -0.86
GTF2A1-203ENST00000553612 TARSP26639 723 aaKnown RBP9.67□□□□□ -0.86
GTF2A1-203ENST00000553612 HSPA9P38646 679 aaKnown RBP9.67□□□□□ -0.86
GTF2A1-203ENST00000553612 MARSP56192 900 aaKnown RBP9.67□□□□□ -0.86
GTF2A1-203ENST00000553612 MTMR3Q13615 1198 aa9.67□□□□□ -0.86
GTF2A1-203ENST00000553612 CFAP221Q4G0U5 840 aa9.67□□□□□ -0.86
GTF2A1-203ENST00000553612 COG3Q96JB2 828 aa9.67□□□□□ -0.86
GTF2A1-203ENST00000553612 NSMCE3Q96MG7 304 aa9.67□□□□□ -0.86
GTF2A1-203ENST00000553612 RILPQ96NA2 401 aa9.67□□□□□ -0.86
GTF2A1-203ENST00000553612 SRPK1Q96SB4 655 aaKnown RBP9.67□□□□□ -0.86
GTF2A1-203ENST00000553612 COMMD3-BMI1R4GMX3 469 aa9.67□□□□□ -0.86
GTF2A1-203ENST00000553612 CADPSQ9ULU8 1353 aa9.67□□□□□ -0.86
GTF2A1-203ENST00000553612 PSMD11O00231 422 aa9.67□□□□□ -0.86
GTF2A1-203ENST00000553612 KCNK3O14649 394 aa9.67□□□□□ -0.86
GTF2A1-203ENST00000553612 COPS2P61201 443 aa9.67□□□□□ -0.86
GTF2A1-203ENST00000553612 KRT32Q14532 448 aa9.67□□□□□ -0.86
GTF2A1-203ENST00000553612 KPNB1Q14974 876 aaKnown RBP9.67□□□□□ -0.86
GTF2A1-203ENST00000553612 PPP2R2DQ66LE6 453 aa9.67□□□□□ -0.86
GTF2A1-203ENST00000553612 PIGOQ8TEQ8 1089 aa9.67□□□□□ -0.86
GTF2A1-203ENST00000553612 MRPL39Q9NYK5 338 aaKnown RBP9.67□□□□□ -0.86
GTF2A1-203ENST00000553612 ARPP21Q9UBL0 812 aaPredicted RBP9.67□□□□□ -0.86
GTF2A1-203ENST00000553612 PHF24Q9UPV7 400 aa9.67□□□□□ -0.86
GTF2A1-203ENST00000553612 MAD1L1Q9Y6D9 718 aa9.67□□□□□ -0.86
GTF2A1-203ENST00000553612 SYNRGQ9UMZ2 1314 aa9.67□□□□□ -0.86
GTF2A1-203ENST00000553612 VDRP11473 427 aa9.66□□□□□ -0.86
GTF2A1-203ENST00000553612 AARSP49588 968 aaKnown RBP eCLIP9.66□□□□□ -0.86
GTF2A1-203ENST00000553612 GFPT1Q06210 699 aaPredicted RBP9.66□□□□□ -0.86
GTF2A1-203ENST00000553612 TRIM25Q14258 630 aaKnown RBP9.66□□□□□ -0.86
GTF2A1-203ENST00000553612 PLEKHA7Q6IQ23 1121 aa9.66□□□□□ -0.86
GTF2A1-203ENST00000553612 TMTC1Q8IUR5 882 aa9.66□□□□□ -0.86
GTF2A1-203ENST00000553612 DHX40Q8IX18 779 aaKnown RBP9.66□□□□□ -0.86
GTF2A1-203ENST00000553612 BEGAINQ9BUH8 593 aa9.66□□□□□ -0.86
GTF2A1-203ENST00000553612 TRIM10Q9UDY6 481 aa9.66□□□□□ -0.86
GTF2A1-203ENST00000553612 CNOT3O75175 753 aaKnown RBP9.66□□□□□ -0.86
GTF2A1-203ENST00000553612 NPTXRO95502 500 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms