RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 BMT2Q1RMZ1 405 aa14.23□□□□□ -0.13
SHMT2-205ENST00000553474 C10orf76Q5T2E6 689 aa14.23□□□□□ -0.13
SHMT2-205ENST00000553474 SFMBT2Q5VUG0 894 aa14.23□□□□□ -0.13
SHMT2-205ENST00000553474 CATSPER3Q86XQ3 398 aa14.23□□□□□ -0.13
SHMT2-205ENST00000553474 LENG9Q96B70 501 aa14.23□□□□□ -0.13
SHMT2-205ENST00000553474 MMS19Q96T76 1030 aa14.23□□□□□ -0.13
SHMT2-205ENST00000553474 JADE2Q9NQC1 790 aa14.23□□□□□ -0.13
SHMT2-205ENST00000553474 MACROD2A1Z1Q3 448 aa14.22□□□□□ -0.13
SHMT2-205ENST00000553474 MED24O75448 989 aa14.22□□□□□ -0.13
SHMT2-205ENST00000553474 GAP43P17677 238 aa14.22□□□□□ -0.13
SHMT2-205ENST00000553474 EPS15P42566 896 aa14.22□□□□□ -0.13
SHMT2-205ENST00000553474 MAGEA1P43355 309 aa14.22□□□□□ -0.13
SHMT2-205ENST00000553474 PRR16Q569H4 304 aa14.22□□□□□ -0.13
SHMT2-205ENST00000553474 FAM83BQ5T0W9 1011 aa14.22□□□□□ -0.13
SHMT2-205ENST00000553474 MMGT1Q8N4V1 131 aa14.22□□□□□ -0.13
SHMT2-205ENST00000553474 CAGE1Q8TC20 777 aa14.22□□□□□ -0.13
SHMT2-205ENST00000553474 EXOC4Q96A65 974 aa14.22□□□□□ -0.13
SHMT2-205ENST00000553474 NOX5Q96PH1 765 aa14.22□□□□□ -0.13
SHMT2-205ENST00000553474 EHMT1Q9H9B1 1298 aa14.22□□□□□ -0.13
SHMT2-205ENST00000553474 METTL14Q9HCE5 456 aaKnown RBP14.22□□□□□ -0.13
SHMT2-205ENST00000553474 PLCB1Q9NQ66 1216 aa14.22□□□□□ -0.13
SHMT2-205ENST00000553474 AIPL1Q9NZN9 384 aa14.22□□□□□ -0.13
SHMT2-205ENST00000553474 TMOD2Q9NZR1 351 aa14.22□□□□□ -0.13
SHMT2-205ENST00000553474 FBXL5Q9UKA1 691 aa14.22□□□□□ -0.13
SHMT2-205ENST00000553474 HYOU1Q9Y4L1 999 aa14.22□□□□□ -0.13
SHMT2-205ENST00000553474 BZW2Q9Y6E2 419 aaKnown RBP14.22□□□□□ -0.13
SHMT2-205ENST00000553474 NKRFO15226 690 aaKnown RBP eCLIP14.22□□□□□ -0.13
SHMT2-205ENST00000553474 CALUO43852 315 aaPredicted RBP14.22□□□□□ -0.13
SHMT2-205ENST00000553474 RAD21O60216 631 aa14.22□□□□□ -0.13
SHMT2-205ENST00000553474 PLA2G6O60733 806 aa14.22□□□□□ -0.13
SHMT2-205ENST00000553474 RPL13P26373 211 aaKnown RBP14.22□□□□□ -0.13
SHMT2-205ENST00000553474 IKQ13123 557 aaPredicted RBP14.22□□□□□ -0.13
SHMT2-205ENST00000553474 ADAM9Q13443 819 aa14.22□□□□□ -0.13
SHMT2-205ENST00000553474 GIT2Q14161 759 aa14.22□□□□□ -0.13
SHMT2-205ENST00000553474 CASP8Q14790 479 aa14.22□□□□□ -0.13
SHMT2-205ENST00000553474 KNOP1Q1ED39 458 aaKnown RBP14.22□□□□□ -0.13
SHMT2-205ENST00000553474 HSP90B2PQ58FF3 399 aa14.22□□□□□ -0.13
SHMT2-205ENST00000553474 ARSHQ5FYA8 562 aa14.22□□□□□ -0.13
SHMT2-205ENST00000553474 HGSNATQ68CP4 663 aa14.22□□□□□ -0.13
SHMT2-205ENST00000553474 EPM2AIP1Q7L775 607 aaPredicted RBP14.22□□□□□ -0.13
SHMT2-205ENST00000553474 GPC2Q8N158 579 aa14.22□□□□□ -0.13
SHMT2-205ENST00000553474 ARHGEF10LQ9HCE6 1279 aa14.22□□□□□ -0.13
SHMT2-205ENST00000553474 TUFT1Q9NNX1 390 aa14.22□□□□□ -0.13
SHMT2-205ENST00000553474 ST7Q9NRC1 585 aa14.22□□□□□ -0.13
SHMT2-205ENST00000553474 OLFML3Q9NRN5 406 aa14.22□□□□□ -0.13
SHMT2-205ENST00000553474 HDAC6Q9UBN7 1215 aa14.22□□□□□ -0.13
SHMT2-205ENST00000553474 ZC3H4Q9UPT8 1303 aaKnown RBP14.21□□□□□ -0.13
SHMT2-205ENST00000553474 SHTN1A0MZ66 631 aa14.21□□□□□ -0.13
SHMT2-205ENST00000553474 SLC16A3O15427 465 aaKnown RBP14.21□□□□□ -0.13
SHMT2-205ENST00000553474 EYA4O95677 639 aa14.21□□□□□ -0.13
SHMT2-205ENST00000553474 PLEKP08567 350 aaPredicted RBP14.21□□□□□ -0.13
SHMT2-205ENST00000553474 SPATA31C1P0DKV0 1188 aa14.21□□□□□ -0.13
SHMT2-205ENST00000553474 STAT2P52630 851 aa14.21□□□□□ -0.13
SHMT2-205ENST00000553474 NFIL3Q16649 462 aa14.21□□□□□ -0.13
SHMT2-205ENST00000553474 DPY19L2Q6NUT2 758 aa14.21□□□□□ -0.13
SHMT2-205ENST00000553474 GLIS3Q8NEA6 775 aa14.21□□□□□ -0.13
SHMT2-205ENST00000553474 FAM71BQ8TC56 605 aa14.21□□□□□ -0.13
SHMT2-205ENST00000553474 GOPCQ9HD26 462 aa14.21□□□□□ -0.13
SHMT2-205ENST00000553474 KCND2Q9NZV8 630 aa14.21□□□□□ -0.13
SHMT2-205ENST00000553474 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.21□□□□□ -0.13
SHMT2-205ENST00000553474 RABGAP1Q9Y3P9 1069 aa14.21□□□□□ -0.13
SHMT2-205ENST00000553474 POTEFA5A3E0 1075 aa14.2□□□□□ -0.14
SHMT2-205ENST00000553474 BTNL10A8MVZ5 291 aa14.2□□□□□ -0.14
SHMT2-205ENST00000553474 EIF3DO15371 548 aaKnown RBP eCLIP14.2□□□□□ -0.14
SHMT2-205ENST00000553474 NOL4O94818 638 aa14.2□□□□□ -0.14
SHMT2-205ENST00000553474 POTEIP0CG38 1075 aa14.2□□□□□ -0.14
SHMT2-205ENST00000553474 NR2F2P24468 414 aa14.2□□□□□ -0.14
SHMT2-205ENST00000553474 BRD2P25440 801 aaKnown RBP14.2□□□□□ -0.14
SHMT2-205ENST00000553474 CACNB3P54284 484 aa14.2□□□□□ -0.14
SHMT2-205ENST00000553474 SLC18A3Q16572 532 aa14.2□□□□□ -0.14
SHMT2-205ENST00000553474 TDRD12Q587J7 1177 aaKnown RBP14.2□□□□□ -0.14
SHMT2-205ENST00000553474 POTEGQ6S5H5 508 aa14.2□□□□□ -0.14
SHMT2-205ENST00000553474 POTEEQ6S8J3 1075 aa14.2□□□□□ -0.14
SHMT2-205ENST00000553474 KRT26Q7Z3Y9 468 aa14.2□□□□□ -0.14
SHMT2-205ENST00000553474 CREG2Q8IUH2 290 aa14.2□□□□□ -0.14
SHMT2-205ENST00000553474 AGBL3Q8NEM8 1001 aa14.2□□□□□ -0.14
SHMT2-205ENST00000553474 CSRNP1Q96S65 589 aa14.2□□□□□ -0.14
SHMT2-205ENST00000553474 TYW1Q9NV66 732 aaKnown RBP14.2□□□□□ -0.14
SHMT2-205ENST00000553474 ARMCX3Q9UH62 379 aaPredicted RBP14.2□□□□□ -0.14
SHMT2-205ENST00000553474 VAV3Q9UKW4 847 aa14.2□□□□□ -0.14
SHMT2-205ENST00000553474 DAAM1Q9Y4D1 1078 aa14.2□□□□□ -0.14
SHMT2-205ENST00000553474 DUSP10Q9Y6W6 482 aa14.2□□□□□ -0.14
SHMT2-205ENST00000553474 UBE4BO95155 1302 aa14.2□□□□□ -0.14
SHMT2-205ENST00000553474 GTPBP10A4D1E9 387 aaKnown RBP14.19□□□□□ -0.14
SHMT2-205ENST00000553474 FAM196BA6NMK8 535 aa14.19□□□□□ -0.14
SHMT2-205ENST00000553474 FAM86B1E9PN63 330 aa14.19□□□□□ -0.14
SHMT2-205ENST00000553474 MSH4O15457 936 aa14.19□□□□□ -0.14
SHMT2-205ENST00000553474 GH2P01242 217 aa14.19□□□□□ -0.14
SHMT2-205ENST00000553474 FAM86B2P0C5J1 330 aa14.19□□□□□ -0.14
SHMT2-205ENST00000553474 AARSP49588 968 aaKnown RBP eCLIP14.19□□□□□ -0.14
SHMT2-205ENST00000553474 GLE1Q53GS7 698 aaKnown RBP14.19□□□□□ -0.14
SHMT2-205ENST00000553474 FMNL3Q8IVF7 1028 aa14.19□□□□□ -0.14
SHMT2-205ENST00000553474 MICALL2Q8IY33 904 aa14.19□□□□□ -0.14
SHMT2-205ENST00000553474 OGFOD1Q8N543 542 aa14.19□□□□□ -0.14
SHMT2-205ENST00000553474 ZNF526Q8TF50 670 aaPredicted RBP14.19□□□□□ -0.14
SHMT2-205ENST00000553474 OSBPL9Q96SU4 736 aa14.19□□□□□ -0.14
SHMT2-205ENST00000553474 REEP2Q9BRK0 252 aa14.19□□□□□ -0.14
SHMT2-205ENST00000553474 SEL1LQ9UBV2 794 aa14.19□□□□□ -0.14
SHMT2-205ENST00000553474 PRR12Q9ULL5 1215 aa14.19□□□□□ -0.14
SHMT2-205ENST00000553474 CAPN6Q9Y6Q1 641 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms