RNA–Protein interactions for RNA: ENST00000553428.2

PCNX1-204, Transcript of pecanex 1, humanhuman

TSL 5

Gene PCNX1, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-204ENST00000553428 PPP1R13LQ8WUF5 828 aa9.38□□□□□ -0.91
PCNX1-204ENST00000553428 LMBR1Q8WVP7 490 aa9.38□□□□□ -0.91
PCNX1-204ENST00000553428 SLC5A5Q92911 643 aa9.38□□□□□ -0.91
PCNX1-204ENST00000553428 LRCH3Q96II8 777 aa9.38□□□□□ -0.91
PCNX1-204ENST00000553428 TBC1D32Q96NH3 1257 aa9.38□□□□□ -0.91
PCNX1-204ENST00000553428 PCYT2Q99447 389 aa9.38□□□□□ -0.91
PCNX1-204ENST00000553428 SETD4Q9NVD3 440 aa9.38□□□□□ -0.91
PCNX1-204ENST00000553428 TELO2Q9Y4R8 837 aa9.38□□□□□ -0.91
PCNX1-204ENST00000553428 PCDHA10Q9Y5I2 948 aa9.38□□□□□ -0.91
PCNX1-204ENST00000553428 MKI67P46013 3256 aaKnown RBP9.37□□□□□ -0.91
PCNX1-204ENST00000553428 POTEB3A0JP26 581 aa9.37□□□□□ -0.91
PCNX1-204ENST00000553428 WDR64B1ANS9 1081 aa9.37□□□□□ -0.91
PCNX1-204ENST00000553428 DDX39AO00148 427 aaKnown RBP9.37□□□□□ -0.91
PCNX1-204ENST00000553428 BACH1O14867 736 aa9.37□□□□□ -0.91
PCNX1-204ENST00000553428 TBX3O15119 743 aa9.37□□□□□ -0.91
PCNX1-204ENST00000553428 MSH4O15457 936 aa9.37□□□□□ -0.91
PCNX1-204ENST00000553428 TREHO43280 583 aa9.37□□□□□ -0.91
PCNX1-204ENST00000553428 HBP1O60381 514 aa9.37□□□□□ -0.91
PCNX1-204ENST00000553428 JAK2O60674 1132 aa9.37□□□□□ -0.91
PCNX1-204ENST00000553428 GAS7O60861 476 aa9.37□□□□□ -0.91
PCNX1-204ENST00000553428 EFCAB14O75071 495 aa9.37□□□□□ -0.91
PCNX1-204ENST00000553428 CXCL10P02778 98 aa9.37□□□□□ -0.91
PCNX1-204ENST00000553428 MMP1P03956 469 aa9.37□□□□□ -0.91
PCNX1-204ENST00000553428 ZNF200P98182 395 aaPredicted RBP9.37□□□□□ -0.91
PCNX1-204ENST00000553428 ST3GAL1Q11201 340 aa9.37□□□□□ -0.91
PCNX1-204ENST00000553428 HIC1Q14526 733 aa9.37□□□□□ -0.91
PCNX1-204ENST00000553428 SAFBQ15424 915 aaKnown RBP eCLIP9.37□□□□□ -0.91
PCNX1-204ENST00000553428 INF2Q27J81 1249 aa9.37□□□□□ -0.91
PCNX1-204ENST00000553428 LRCH2Q5VUJ6 765 aa9.37□□□□□ -0.91
PCNX1-204ENST00000553428 POTEBQ6S5H4 581 aa9.37□□□□□ -0.91
PCNX1-204ENST00000553428 FAM43BQ6ZT52 329 aaPredicted RBP9.37□□□□□ -0.91
PCNX1-204ENST00000553428 CCDC83Q8IWF9 413 aa9.37□□□□□ -0.91
PCNX1-204ENST00000553428 ATP8B4Q8TF62 1192 aa9.37□□□□□ -0.91
PCNX1-204ENST00000553428 VWCEQ96DN2 955 aa9.37□□□□□ -0.91
PCNX1-204ENST00000553428 FAM20AQ96MK3 541 aa9.37□□□□□ -0.91
PCNX1-204ENST00000553428 TEKT3Q9BXF9 490 aa9.37□□□□□ -0.91
PCNX1-204ENST00000553428 ZNF302Q9NR11 478 aa9.37□□□□□ -0.91
PCNX1-204ENST00000553428 TRPC6Q9Y210 931 aa9.37□□□□□ -0.91
PCNX1-204ENST00000553428 KIF3AQ9Y496 699 aa9.37□□□□□ -0.91
PCNX1-204ENST00000553428 MAFBQ9Y5Q3 323 aaPredicted RBP9.37□□□□□ -0.91
PCNX1-204ENST00000553428 COL1A2P08123 1366 aa9.37□□□□□ -0.91
PCNX1-204ENST00000553428 ABHD14A-ACY1A0A1B0GW23 586 aa9.36□□□□□ -0.91
PCNX1-204ENST00000553428 RSPH10B2B2RC85 870 aa9.36□□□□□ -0.91
PCNX1-204ENST00000553428 PSMD10O75832 226 aa9.36□□□□□ -0.91
PCNX1-204ENST00000553428 TDP2O95551 362 aa9.36□□□□□ -0.91
PCNX1-204ENST00000553428 RSPH10BP0C881 870 aa9.36□□□□□ -0.91
PCNX1-204ENST00000553428 INSRRP14616 1297 aa9.36□□□□□ -0.91
PCNX1-204ENST00000553428 MARK3P27448 753 aa9.36□□□□□ -0.91
PCNX1-204ENST00000553428 THPOP40225 353 aa9.36□□□□□ -0.91
PCNX1-204ENST00000553428 PLCB4Q15147 1175 aa9.36□□□□□ -0.91
PCNX1-204ENST00000553428 RAB30Q15771 203 aa9.36□□□□□ -0.91
PCNX1-204ENST00000553428 LETM2Q2VYF4 491 aa9.36□□□□□ -0.91
PCNX1-204ENST00000553428 FAM26DQ5JW98 314 aa9.36□□□□□ -0.91
PCNX1-204ENST00000553428 ZNF618Q5T7W0 954 aa9.36□□□□□ -0.91
PCNX1-204ENST00000553428 ZNF697Q5TEC3 545 aa9.36□□□□□ -0.91
PCNX1-204ENST00000553428 KRT40Q6A162 431 aa9.36□□□□□ -0.91
PCNX1-204ENST00000553428 SWSAP1Q6NVH7 229 aa9.36□□□□□ -0.91
PCNX1-204ENST00000553428 PDXDC2PQ6P474 469 aa9.36□□□□□ -0.91
PCNX1-204ENST00000553428 CNKSR3Q6P9H4 555 aa9.36□□□□□ -0.91
PCNX1-204ENST00000553428 TRAF7Q6Q0C0 670 aa9.36□□□□□ -0.91
PCNX1-204ENST00000553428 PIK3AP1Q6ZUJ8 805 aa9.36□□□□□ -0.91
PCNX1-204ENST00000553428 OTOP2Q7RTS6 562 aa9.36□□□□□ -0.91
PCNX1-204ENST00000553428 DEFB128Q7Z7B8 93 aa9.36□□□□□ -0.91
PCNX1-204ENST00000553428 CCDC60Q8IWA6 550 aaPredicted RBP9.36□□□□□ -0.91
PCNX1-204ENST00000553428 DIS3L2Q8IYB7 885 aaKnown RBP9.36□□□□□ -0.91
PCNX1-204ENST00000553428 FAM184AQ8NB25 1140 aa9.36□□□□□ -0.91
PCNX1-204ENST00000553428 PHOSPHO2Q8TCD6 241 aa9.36□□□□□ -0.91
PCNX1-204ENST00000553428 BBXQ8WY36 941 aaPredicted RBP9.36□□□□□ -0.91
PCNX1-204ENST00000553428 TNFRSF25Q93038 417 aa9.36□□□□□ -0.91
PCNX1-204ENST00000553428 WNT8BQ93098 351 aa9.36□□□□□ -0.91
PCNX1-204ENST00000553428 C8orf76Q96K31 380 aa9.36□□□□□ -0.91
PCNX1-204ENST00000553428 FAM167AQ96KS9 214 aa9.36□□□□□ -0.91
PCNX1-204ENST00000553428 SLC9A7Q96T83 725 aa9.36□□□□□ -0.91
PCNX1-204ENST00000553428 FTOQ9C0B1 505 aaKnown RBP eCLIP9.36□□□□□ -0.91
PCNX1-204ENST00000553428 DISC1Q9NRI5 854 aa9.36□□□□□ -0.91
PCNX1-204ENST00000553428 DDX25Q9UHL0 483 aaKnown RBP9.36□□□□□ -0.91
PCNX1-204ENST00000553428 TUBE1Q9UJT0 475 aa9.36□□□□□ -0.91
PCNX1-204ENST00000553428 CEP131Q9UPN4 1083 aa9.36□□□□□ -0.91
PCNX1-204ENST00000553428 SAMM50Q9Y512 469 aa9.36□□□□□ -0.91
PCNX1-204ENST00000553428 SLC4A7Q9Y6M7 1214 aa9.36□□□□□ -0.91
PCNX1-204ENST00000553428 ZBBXA8MT70 800 aa9.35□□□□□ -0.91
PCNX1-204ENST00000553428 NBNO60934 754 aa9.35□□□□□ -0.91
PCNX1-204ENST00000553428 GPNMBQ14956 572 aa9.35□□□□□ -0.91
PCNX1-204ENST00000553428 ZNF484Q5JVG2 852 aa9.35□□□□□ -0.91
PCNX1-204ENST00000553428 MARCH8Q5T0T0 291 aa9.35□□□□□ -0.91
PCNX1-204ENST00000553428 B3GNT9Q6UX72 402 aa9.35□□□□□ -0.91
PCNX1-204ENST00000553428 SLFN12Q8IYM2 578 aa9.35□□□□□ -0.91
PCNX1-204ENST00000553428 ZNF710Q8N1W2 664 aa9.35□□□□□ -0.91
PCNX1-204ENST00000553428 NME8Q8N427 588 aa9.35□□□□□ -0.91
PCNX1-204ENST00000553428 ETNPPLQ8TBG4 499 aa9.35□□□□□ -0.91
PCNX1-204ENST00000553428 OXER1Q8TDS5 423 aa9.35□□□□□ -0.91
PCNX1-204ENST00000553428 BACH2Q9BYV9 841 aa9.35□□□□□ -0.91
PCNX1-204ENST00000553428 FOXP1Q9H334 677 aaPredicted RBP9.35□□□□□ -0.91
PCNX1-204ENST00000553428 KCNMB3Q9NPA1 279 aa9.35□□□□□ -0.91
PCNX1-204ENST00000553428 GJB4Q9NTQ9 266 aa9.35□□□□□ -0.91
PCNX1-204ENST00000553428 CXXC1Q9P0U4 656 aaPredicted RBP9.35□□□□□ -0.91
PCNX1-204ENST00000553428 MSRAQ9UJ68 235 aa9.35□□□□□ -0.91
PCNX1-204ENST00000553428 PCDHA2Q9Y5H9 948 aa9.35□□□□□ -0.91
PCNX1-204ENST00000553428 SQORQ9Y6N5 450 aa9.35□□□□□ -0.91
PCNX1-204ENST00000553428 IGSF9BQ9UPX0 1349 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms