RNA–Protein interactions for RNA: ENST00000553426.1

LINC00643-202, long intergenic non-protein coding RNA 643, humanhuman

TSL 3 BASIC

Gene LINC00643, Length 526 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-202ENST00000553426 HTRA4P83105 476 aaPredicted RBP14.54□□□□□ -0.08
LINC00643-202ENST00000553426 FUT2Q10981 343 aa14.54□□□□□ -0.08
LINC00643-202ENST00000553426 IER5Q5VY09 327 aa14.54□□□□□ -0.08
LINC00643-202ENST00000553426 KRT40Q6A162 431 aa14.54□□□□□ -0.08
LINC00643-202ENST00000553426 TYW1BQ6NUM6 668 aa14.54□□□□□ -0.08
LINC00643-202ENST00000553426 Q6ZUG5 572 aa14.54□□□□□ -0.08
LINC00643-202ENST00000553426 FBXO22Q8NEZ5 403 aa14.54□□□□□ -0.08
LINC00643-202ENST00000553426 GDPD5Q8WTR4 605 aa14.54□□□□□ -0.08
LINC00643-202ENST00000553426 TOP1MTQ969P6 601 aa14.54□□□□□ -0.08
LINC00643-202ENST00000553426 PGBD1Q96JS3 809 aa14.54□□□□□ -0.08
LINC00643-202ENST00000553426 SUGCTQ9HAC7 445 aa14.54□□□□□ -0.08
LINC00643-202ENST00000553426 TCF20Q9UGU0 1960 aaKnown RBP14.53□□□□□ -0.08
LINC00643-202ENST00000553426 CHRNA1P02708 482 aa14.53□□□□□ -0.08
LINC00643-202ENST00000553426 SCG2P13521 617 aa14.53□□□□□ -0.08
LINC00643-202ENST00000553426 INSRRP14616 1297 aa14.53□□□□□ -0.08
LINC00643-202ENST00000553426 CDC27P30260 824 aa14.53□□□□□ -0.08
LINC00643-202ENST00000553426 SREBF1P36956 1147 aa14.53□□□□□ -0.08
LINC00643-202ENST00000553426 STAT5BP51692 787 aa14.53□□□□□ -0.08
LINC00643-202ENST00000553426 ACTR2P61160 394 aa14.53□□□□□ -0.08
LINC00643-202ENST00000553426 TFF2Q03403 129 aa14.53□□□□□ -0.08
LINC00643-202ENST00000553426 APOBRQ0VD83 1088 aa14.53□□□□□ -0.08
LINC00643-202ENST00000553426 PTPROQ16827 1216 aa14.53□□□□□ -0.08
LINC00643-202ENST00000553426 PFKFB3Q16875 520 aaPredicted RBP14.53□□□□□ -0.08
LINC00643-202ENST00000553426 RUFY4Q6ZNE9 571 aa14.53□□□□□ -0.08
LINC00643-202ENST00000553426 PLPPR4Q7Z2D5 763 aa14.53□□□□□ -0.08
LINC00643-202ENST00000553426 SPRED2Q7Z698 418 aa14.53□□□□□ -0.08
LINC00643-202ENST00000553426 CYP2W1Q8TAV3 490 aa14.53□□□□□ -0.08
LINC00643-202ENST00000553426 DNAJB3Q8WWF6 145 aa14.53□□□□□ -0.08
LINC00643-202ENST00000553426 BRF1Q92994 677 aa14.53□□□□□ -0.08
LINC00643-202ENST00000553426 C6orf50Q9HD87 102 aa14.53□□□□□ -0.08
LINC00643-202ENST00000553426 PTPRSQ13332 1948 aa14.53□□□□□ -0.08
LINC00643-202ENST00000553426 MBLAC1A4D2B0 266 aaPredicted RBP14.52□□□□□ -0.09
LINC00643-202ENST00000553426 MEIS1O00470 390 aa14.52□□□□□ -0.09
LINC00643-202ENST00000553426 ARP10275 920 aa14.52□□□□□ -0.09
LINC00643-202ENST00000553426 GHRP10912 638 aa14.52□□□□□ -0.09
LINC00643-202ENST00000553426 GNA11P29992 359 aa14.52□□□□□ -0.09
LINC00643-202ENST00000553426 HSPA4P34932 840 aa14.52□□□□□ -0.09
LINC00643-202ENST00000553426 ADD1P35611 737 aaKnown RBP14.52□□□□□ -0.09
LINC00643-202ENST00000553426 PLA2G5P39877 138 aa14.52□□□□□ -0.09
LINC00643-202ENST00000553426 SLC26A2P50443 739 aa14.52□□□□□ -0.09
LINC00643-202ENST00000553426 MKRN4PQ13434 485 aaPredicted RBP14.52□□□□□ -0.09
LINC00643-202ENST00000553426 JAKMIP3Q5VZ66 844 aa14.52□□□□□ -0.09
LINC00643-202ENST00000553426 FAM160B1Q5W0V3 765 aa14.52□□□□□ -0.09
LINC00643-202ENST00000553426 NIPA1Q7RTP0 329 aa14.52□□□□□ -0.09
LINC00643-202ENST00000553426 SP7Q8TDD2 431 aaPredicted RBP14.52□□□□□ -0.09
LINC00643-202ENST00000553426 KCNB2Q92953 911 aa14.52□□□□□ -0.09
LINC00643-202ENST00000553426 FAM49AQ9H0Q0 323 aaPredicted RBP14.52□□□□□ -0.09
LINC00643-202ENST00000553426 AGO4Q9HCK5 861 aaKnown RBP14.52□□□□□ -0.09
LINC00643-202ENST00000553426 FAM217BQ9NTX9 383 aaPredicted RBP14.52□□□□□ -0.09
LINC00643-202ENST00000553426 TCEAL9Q9UHQ7 104 aa14.52□□□□□ -0.09
LINC00643-202ENST00000553426 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.51□□□□□ -0.09
LINC00643-202ENST00000553426 ESYT2A0FGR8 921 aa14.51□□□□□ -0.09
LINC00643-202ENST00000553426 POTEB3A0JP26 581 aa14.51□□□□□ -0.09
LINC00643-202ENST00000553426 BACH1O14867 736 aa14.51□□□□□ -0.09
LINC00643-202ENST00000553426 BMP1P13497 986 aa14.51□□□□□ -0.09
LINC00643-202ENST00000553426 MRPS6P82932 125 aaKnown RBP14.51□□□□□ -0.09
LINC00643-202ENST00000553426 EPC2Q52LR7 807 aa14.51□□□□□ -0.09
LINC00643-202ENST00000553426 POTEBQ6S5H4 581 aa14.51□□□□□ -0.09
LINC00643-202ENST00000553426 PLA2G4DQ86XP0 818 aa14.51□□□□□ -0.09
LINC00643-202ENST00000553426 REXO1Q8N1G1 1221 aaKnown RBP14.51□□□□□ -0.09
LINC00643-202ENST00000553426 BICD2Q8TD16 824 aa14.51□□□□□ -0.09
LINC00643-202ENST00000553426 IL17RAQ96F46 866 aa14.51□□□□□ -0.09
LINC00643-202ENST00000553426 NECAB3Q96P71 396 aaPredicted RBP14.51□□□□□ -0.09
LINC00643-202ENST00000553426 C17orf80Q9BSJ5 609 aa14.51□□□□□ -0.09
LINC00643-202ENST00000553426 ZMYND12Q9H0C1 365 aa14.51□□□□□ -0.09
LINC00643-202ENST00000553426 TMEM260Q9NX78 707 aa14.51□□□□□ -0.09
LINC00643-202ENST00000553426 SNX14Q9Y5W7 946 aa14.51□□□□□ -0.09
LINC00643-202ENST00000553426 CDY2AQ9Y6F7 541 aa14.51□□□□□ -0.09
LINC00643-202ENST00000553426 SQORQ9Y6N5 450 aa14.51□□□□□ -0.09
LINC00643-202ENST00000553426 MICAL3Q7RTP6 2002 aa14.51□□□□□ -0.09
LINC00643-202ENST00000553426 DDX39AO00148 427 aaKnown RBP14.5□□□□□ -0.09
LINC00643-202ENST00000553426 PRPF3O43395 683 aaKnown RBP14.5□□□□□ -0.09
LINC00643-202ENST00000553426 CPA1P15085 419 aa14.5□□□□□ -0.09
LINC00643-202ENST00000553426 RPS6KB1P23443 525 aa14.5□□□□□ -0.09
LINC00643-202ENST00000553426 CLK2P49760 499 aaKnown RBP14.5□□□□□ -0.09
LINC00643-202ENST00000553426 KCNQ1P51787 676 aa14.5□□□□□ -0.09
LINC00643-202ENST00000553426 SETQ01105 290 aaPredicted RBP14.5□□□□□ -0.09
LINC00643-202ENST00000553426 ITGB3BPQ13352 177 aaPredicted RBP14.5□□□□□ -0.09
LINC00643-202ENST00000553426 LPIN1Q14693 890 aa14.5□□□□□ -0.09
LINC00643-202ENST00000553426 PLCB4Q15147 1175 aa14.5□□□□□ -0.09
LINC00643-202ENST00000553426 FBXO47Q5MNV8 452 aa14.5□□□□□ -0.09
LINC00643-202ENST00000553426 MARCH8Q5T0T0 291 aa14.5□□□□□ -0.09
LINC00643-202ENST00000553426 TSHZ1Q6ZSZ6 1077 aa14.5□□□□□ -0.09
LINC00643-202ENST00000553426 TMEM192Q8IY95 271 aa14.5□□□□□ -0.09
LINC00643-202ENST00000553426 NME8Q8N427 588 aa14.5□□□□□ -0.09
LINC00643-202ENST00000553426 FBXL16Q8N461 479 aa14.5□□□□□ -0.09
LINC00643-202ENST00000553426 FIBCD1Q8N539 461 aa14.5□□□□□ -0.09
LINC00643-202ENST00000553426 CCDC148Q8NFR7 591 aa14.5□□□□□ -0.09
LINC00643-202ENST00000553426 PCYT2Q99447 389 aa14.5□□□□□ -0.09
LINC00643-202ENST00000553426 FTHL17Q9BXU8 183 aa14.5□□□□□ -0.09
LINC00643-202ENST00000553426 OSBPL7Q9BZF2 842 aa14.5□□□□□ -0.09
LINC00643-202ENST00000553426 TBC1D22BQ9NU19 505 aa14.5□□□□□ -0.09
LINC00643-202ENST00000553426 RWDD3Q9Y3V2 267 aa14.5□□□□□ -0.09
LINC00643-202ENST00000553426 PCDHA2Q9Y5H9 948 aa14.5□□□□□ -0.09
LINC00643-202ENST00000553426 IPO5O00410 1097 aaKnown RBP14.49□□□□□ -0.09
LINC00643-202ENST00000553426 ATG7O95352 703 aa14.49□□□□□ -0.09
LINC00643-202ENST00000553426 CYP3A4P08684 503 aa14.49□□□□□ -0.09
LINC00643-202ENST00000553426 MGAT3Q09327 533 aa14.49□□□□□ -0.09
LINC00643-202ENST00000553426 GPM6BQ13491 265 aa14.49□□□□□ -0.09
LINC00643-202ENST00000553426 TIGD5Q53EQ6 642 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms