RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 CALM2P0DP24 149 aa11.38□□□□□ -0.59
ACTN1-208ENST00000553370 CALM3P0DP25 149 aa11.38□□□□□ -0.59
ACTN1-208ENST00000553370 C7P10643 843 aa11.38□□□□□ -0.59
ACTN1-208ENST00000553370 MARK3P27448 753 aa11.38□□□□□ -0.59
ACTN1-208ENST00000553370 MCM5P33992 734 aa11.38□□□□□ -0.59
ACTN1-208ENST00000553370 CTNNB1P35222 781 aa11.38□□□□□ -0.59
ACTN1-208ENST00000553370 IRX6P78412 446 aaPredicted RBP11.38□□□□□ -0.59
ACTN1-208ENST00000553370 TROAPQ12815 778 aa11.38□□□□□ -0.59
ACTN1-208ENST00000553370 PPFIA1Q13136 1202 aa11.38□□□□□ -0.59
ACTN1-208ENST00000553370 GPM6BQ13491 265 aa11.38□□□□□ -0.59
ACTN1-208ENST00000553370 PLEKHG4Q58EX7 1191 aa11.38□□□□□ -0.59
ACTN1-208ENST00000553370 TMEM31Q5JXX7 168 aa11.38□□□□□ -0.59
ACTN1-208ENST00000553370 PCNX4Q63HM2 1172 aa11.38□□□□□ -0.59
ACTN1-208ENST00000553370 XRRA1Q6P2D8 792 aa11.38□□□□□ -0.59
ACTN1-208ENST00000553370 USP17L6PQ6QN14 398 aa11.38□□□□□ -0.59
ACTN1-208ENST00000553370 SYNE3Q6ZMZ3 975 aa11.38□□□□□ -0.59
ACTN1-208ENST00000553370 LMBR1Q8WVP7 490 aa11.38□□□□□ -0.59
ACTN1-208ENST00000553370 INPP4AQ96PE3 977 aaPredicted RBP11.38□□□□□ -0.59
ACTN1-208ENST00000553370 SPZ1Q9BXG8 430 aa11.38□□□□□ -0.59
ACTN1-208ENST00000553370 RNPEPQ9H4A4 650 aa11.38□□□□□ -0.59
ACTN1-208ENST00000553370 PSTPIP2Q9H939 334 aa11.38□□□□□ -0.59
ACTN1-208ENST00000553370 FAM50BQ9Y247 325 aa11.38□□□□□ -0.59
ACTN1-208ENST00000553370 SUPT16HQ9Y5B9 1047 aaKnown RBP11.38□□□□□ -0.59
ACTN1-208ENST00000553370 FRMPD4Q14CM0 1322 aa11.37□□□□□ -0.59
ACTN1-208ENST00000553370 M0QZ92 97 aa11.37□□□□□ -0.59
ACTN1-208ENST00000553370 SGSM2O43147 1006 aa11.37□□□□□ -0.59
ACTN1-208ENST00000553370 CSPG5O95196 566 aa11.37□□□□□ -0.59
ACTN1-208ENST00000553370 GHRP10912 638 aa11.37□□□□□ -0.59
ACTN1-208ENST00000553370 ICAM3P32942 547 aa11.37□□□□□ -0.59
ACTN1-208ENST00000553370 TCF7P36402 384 aaPredicted RBP11.37□□□□□ -0.59
ACTN1-208ENST00000553370 IGBP1P78318 339 aa11.37□□□□□ -0.59
ACTN1-208ENST00000553370 MRPS9P82933 396 aaKnown RBP11.37□□□□□ -0.59
ACTN1-208ENST00000553370 PTGDRQ13258 359 aa11.37□□□□□ -0.59
ACTN1-208ENST00000553370 SLC35G1Q2M3R5 365 aa11.37□□□□□ -0.59
ACTN1-208ENST00000553370 EPC2Q52LR7 807 aa11.37□□□□□ -0.59
ACTN1-208ENST00000553370 PTCRAQ6ISU1 281 aaPredicted RBP11.37□□□□□ -0.59
ACTN1-208ENST00000553370 TRAF7Q6Q0C0 670 aa11.37□□□□□ -0.59
ACTN1-208ENST00000553370 HEATR3Q7Z4Q2 680 aa11.37□□□□□ -0.59
ACTN1-208ENST00000553370 MB21D2Q8IYB1 491 aaPredicted RBP11.37□□□□□ -0.59
ACTN1-208ENST00000553370 TMTC2Q8N394 836 aa11.37□□□□□ -0.59
ACTN1-208ENST00000553370 MRPL38Q96DV4 380 aaKnown RBP11.37□□□□□ -0.59
ACTN1-208ENST00000553370 LY9Q9HBG7 655 aa11.37□□□□□ -0.59
ACTN1-208ENST00000553370 SLC12A7Q9Y666 1083 aa11.37□□□□□ -0.59
ACTN1-208ENST00000553370 C5orf42Q9H799 3197 aa11.37□□□□□ -0.59
ACTN1-208ENST00000553370 PIEZO1Q92508 2521 aa11.37□□□□□ -0.59
ACTN1-208ENST00000553370 NRCAMQ92823 1304 aa11.36□□□□□ -0.59
ACTN1-208ENST00000553370 PLEKHA8P1O95397 391 aa11.36□□□□□ -0.59
ACTN1-208ENST00000553370 RXRAP19793 462 aa11.36□□□□□ -0.59
ACTN1-208ENST00000553370 IBSPP21815 317 aaPredicted RBP11.36□□□□□ -0.59
ACTN1-208ENST00000553370 PLA2G5P39877 138 aa11.36□□□□□ -0.59
ACTN1-208ENST00000553370 ANTXR2P58335 489 aa11.36□□□□□ -0.59
ACTN1-208ENST00000553370 HTRA4P83105 476 aaPredicted RBP11.36□□□□□ -0.59
ACTN1-208ENST00000553370 MTMR1Q13613 665 aa11.36□□□□□ -0.59
ACTN1-208ENST00000553370 CSPP1Q1MSJ5 1256 aa11.36□□□□□ -0.59
ACTN1-208ENST00000553370 TAF2Q6P1X5 1199 aa11.36□□□□□ -0.59
ACTN1-208ENST00000553370 MICU3Q86XE3 530 aa11.36□□□□□ -0.59
ACTN1-208ENST00000553370 RAB11FIP4Q86YS3 637 aa11.36□□□□□ -0.59
ACTN1-208ENST00000553370 TMEM192Q8IY95 271 aa11.36□□□□□ -0.59
ACTN1-208ENST00000553370 CCDC82Q8N4S0 544 aa11.36□□□□□ -0.59
ACTN1-208ENST00000553370 FIBCD1Q8N539 461 aa11.36□□□□□ -0.59
ACTN1-208ENST00000553370 GPRASP2Q96D09 838 aa11.36□□□□□ -0.59
ACTN1-208ENST00000553370 IL17RAQ96F46 866 aa11.36□□□□□ -0.59
ACTN1-208ENST00000553370 TMEM87BQ96K49 555 aa11.36□□□□□ -0.59
ACTN1-208ENST00000553370 UIMC1Q96RL1 719 aa11.36□□□□□ -0.59
ACTN1-208ENST00000553370 MAP3K14Q99558 947 aa11.36□□□□□ -0.59
ACTN1-208ENST00000553370 AZI2Q9H6S1 392 aa11.36□□□□□ -0.59
ACTN1-208ENST00000553370 BCAS3Q9H6U6 928 aa11.36□□□□□ -0.59
ACTN1-208ENST00000553370 ERAP1Q9NZ08 941 aa11.36□□□□□ -0.59
ACTN1-208ENST00000553370 TCEAL9Q9UHQ7 104 aa11.36□□□□□ -0.59
ACTN1-208ENST00000553370 TUBE1Q9UJT0 475 aa11.36□□□□□ -0.59
ACTN1-208ENST00000553370 RWDD3Q9Y3V2 267 aa11.36□□□□□ -0.59
ACTN1-208ENST00000553370 TAF6LQ9Y6J9 622 aa11.36□□□□□ -0.59
ACTN1-208ENST00000553370 COL4A6Q14031 1691 aa11.36□□□□□ -0.59
ACTN1-208ENST00000553370 hCG_1642624A0A1W2PR95 340 aa11.35□□□□□ -0.59
ACTN1-208ENST00000553370 FAM86C2PA6NEL3 165 aa11.35□□□□□ -0.59
ACTN1-208ENST00000553370 H3BQ06 376 aaPredicted RBP11.35□□□□□ -0.59
ACTN1-208ENST00000553370 PIK3CDO00329 1044 aa11.35□□□□□ -0.59
ACTN1-208ENST00000553370 SH2B2O14492 632 aaPredicted RBP11.35□□□□□ -0.59
ACTN1-208ENST00000553370 SEMA3FQ13275 785 aa11.35□□□□□ -0.59
ACTN1-208ENST00000553370 GRIK4Q16099 956 aa11.35□□□□□ -0.59
ACTN1-208ENST00000553370 UBE2SQ16763 222 aa11.35□□□□□ -0.59
ACTN1-208ENST00000553370 PUS10Q3MIT2 529 aaKnown RBP11.35□□□□□ -0.59
ACTN1-208ENST00000553370 LEXMQ3ZCV2 418 aa11.35□□□□□ -0.59
ACTN1-208ENST00000553370 CMTR1Q8N1G2 835 aaKnown RBP11.35□□□□□ -0.59
ACTN1-208ENST00000553370 BANK1Q8NDB2 785 aa11.35□□□□□ -0.59
ACTN1-208ENST00000553370 IGDCC4Q8TDY8 1250 aa11.35□□□□□ -0.59
ACTN1-208ENST00000553370 TNPO1Q92973 898 aaKnown RBP11.35□□□□□ -0.59
ACTN1-208ENST00000553370 TOP1MTQ969P6 601 aa11.35□□□□□ -0.59
ACTN1-208ENST00000553370 SENP7Q9BQF6 1050 aa11.35□□□□□ -0.59
ACTN1-208ENST00000553370 SDF4Q9BRK5 362 aa11.35□□□□□ -0.59
ACTN1-208ENST00000553370 C11orf84Q9BUA3 381 aaPredicted RBP11.35□□□□□ -0.59
ACTN1-208ENST00000553370 FAM49AQ9H0Q0 323 aaPredicted RBP11.35□□□□□ -0.59
ACTN1-208ENST00000553370 SMARCAD1Q9H4L7 1026 aa11.35□□□□□ -0.59
ACTN1-208ENST00000553370 NSUN3Q9H649 340 aaKnown RBP11.35□□□□□ -0.59
ACTN1-208ENST00000553370 EPHX3Q9H6B9 360 aa11.35□□□□□ -0.59
ACTN1-208ENST00000553370 ANO2Q9NQ90 1003 aa11.35□□□□□ -0.59
ACTN1-208ENST00000553370 CLDND1Q9NY35 253 aa11.35□□□□□ -0.59
ACTN1-208ENST00000553370 NAP1L2Q9ULW6 460 aaPredicted RBP11.35□□□□□ -0.59
ACTN1-208ENST00000553370 ADGRA3Q8IWK6 1321 aa11.35□□□□□ -0.59
ACTN1-208ENST00000553370 FNDC1Q4ZHG4 1894 aaPredicted RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms