RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 ADAMTS3O15072 1205 aa14.73□□□□□ -0.05
ACTN1-207ENST00000553290 TLL1O43897 1013 aa14.73□□□□□ -0.05
ACTN1-207ENST00000553290 RPLP2P05387 115 aaKnown RBP14.73□□□□□ -0.05
ACTN1-207ENST00000553290 CA3P07451 260 aa14.73□□□□□ -0.05
ACTN1-207ENST00000553290 SLC26A2P50443 739 aa14.73□□□□□ -0.05
ACTN1-207ENST00000553290 STAT5BP51692 787 aa14.73□□□□□ -0.05
ACTN1-207ENST00000553290 STK3Q13188 491 aa14.73□□□□□ -0.05
ACTN1-207ENST00000553290 PLEKHG4Q58EX7 1191 aa14.73□□□□□ -0.05
ACTN1-207ENST00000553290 FAM26DQ5JW98 314 aa14.73□□□□□ -0.05
ACTN1-207ENST00000553290 RSPH3Q86UC2 560 aa14.73□□□□□ -0.05
ACTN1-207ENST00000553290 FAM177A1Q8N128 213 aaPredicted RBP14.73□□□□□ -0.05
ACTN1-207ENST00000553290 DBF4BQ8NFT6 615 aa14.73□□□□□ -0.05
ACTN1-207ENST00000553290 LARP6Q9BRS8 491 aaKnown RBP14.73□□□□□ -0.05
ACTN1-207ENST00000553290 ZBED2Q9BTP6 218 aa14.73□□□□□ -0.05
ACTN1-207ENST00000553290 TUBE1Q9UJT0 475 aa14.73□□□□□ -0.05
ACTN1-207ENST00000553290 PTPRSQ13332 1948 aa14.72□□□□□ -0.05
ACTN1-207ENST00000553290 MBLAC1A4D2B0 266 aaPredicted RBP14.72□□□□□ -0.05
ACTN1-207ENST00000553290 CTSHP09668 335 aa14.72□□□□□ -0.05
ACTN1-207ENST00000553290 INSRRP14616 1297 aa14.72□□□□□ -0.05
ACTN1-207ENST00000553290 CIITAP33076 1130 aa14.72□□□□□ -0.05
ACTN1-207ENST00000553290 NLRP5P59047 1200 aa14.72□□□□□ -0.05
ACTN1-207ENST00000553290 DEFB103AP81534 67 aa14.72□□□□□ -0.05
ACTN1-207ENST00000553290 TCTN1Q2MV58 587 aa14.72□□□□□ -0.05
ACTN1-207ENST00000553290 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.72□□□□□ -0.05
ACTN1-207ENST00000553290 RASGRP4Q8TDF6 673 aa14.72□□□□□ -0.05
ACTN1-207ENST00000553290 SEPT8Q92599 483 aa14.72□□□□□ -0.05
ACTN1-207ENST00000553290 ZNF577Q9BSK1 485 aa14.72□□□□□ -0.05
ACTN1-207ENST00000553290 C22orf23Q9BZE7 217 aa14.72□□□□□ -0.05
ACTN1-207ENST00000553290 TBC1D22BQ9NU19 505 aa14.72□□□□□ -0.05
ACTN1-207ENST00000553290 TRPC6Q9Y210 931 aa14.72□□□□□ -0.05
ACTN1-207ENST00000553290 IGKV6D-21A0A0A0MT36 114 aa14.71□□□□□ -0.05
ACTN1-207ENST00000553290 DDX39AO00148 427 aaKnown RBP14.71□□□□□ -0.05
ACTN1-207ENST00000553290 DHX15O43143 795 aaKnown RBP14.71□□□□□ -0.05
ACTN1-207ENST00000553290 CDKL5O76039 1030 aa14.71□□□□□ -0.05
ACTN1-207ENST00000553290 GJB5O95377 273 aa14.71□□□□□ -0.05
ACTN1-207ENST00000553290 CCNE2O96020 404 aa14.71□□□□□ -0.05
ACTN1-207ENST00000553290 USP11P51784 963 aa14.71□□□□□ -0.05
ACTN1-207ENST00000553290 IGBP1P78318 339 aa14.71□□□□□ -0.05
ACTN1-207ENST00000553290 PLCB4Q15147 1175 aa14.71□□□□□ -0.05
ACTN1-207ENST00000553290 ANKRD1Q15327 319 aa14.71□□□□□ -0.05
ACTN1-207ENST00000553290 MARCH8Q5T0T0 291 aa14.71□□□□□ -0.05
ACTN1-207ENST00000553290 FAM160B1Q5W0V3 765 aa14.71□□□□□ -0.05
ACTN1-207ENST00000553290 GALNT17Q6IS24 598 aa14.71□□□□□ -0.05
ACTN1-207ENST00000553290 MIS18BP1Q6P0N0 1132 aa14.71□□□□□ -0.05
ACTN1-207ENST00000553290 ABHD15Q6UXT9 468 aa14.71□□□□□ -0.05
ACTN1-207ENST00000553290 RUFY4Q6ZNE9 571 aa14.71□□□□□ -0.05
ACTN1-207ENST00000553290 APBB2Q92870 758 aa14.71□□□□□ -0.05
ACTN1-207ENST00000553290 RAD9AQ99638 391 aa14.71□□□□□ -0.05
ACTN1-207ENST00000553290 SLKQ9H2G2 1235 aaPredicted RBP14.71□□□□□ -0.05
ACTN1-207ENST00000553290 TCEAL9Q9UHQ7 104 aa14.71□□□□□ -0.05
ACTN1-207ENST00000553290 PCDHA4Q9UN74 947 aa14.71□□□□□ -0.05
ACTN1-207ENST00000553290 MICAL3Q7RTP6 2002 aa14.71□□□□□ -0.05
ACTN1-207ENST00000553290 POTEB3A0JP26 581 aa14.7□□□□□ -0.06
ACTN1-207ENST00000553290 BACH1O14867 736 aa14.7□□□□□ -0.06
ACTN1-207ENST00000553290 CHRNA1P02708 482 aa14.7□□□□□ -0.06
ACTN1-207ENST00000553290 AMHP03971 560 aa14.7□□□□□ -0.06
ACTN1-207ENST00000553290 IGFBP4P22692 258 aa14.7□□□□□ -0.06
ACTN1-207ENST00000553290 TAP1Q03518 808 aa14.7□□□□□ -0.06
ACTN1-207ENST00000553290 MKRN4PQ13434 485 aaPredicted RBP14.7□□□□□ -0.06
ACTN1-207ENST00000553290 ADGRE1Q14246 886 aa14.7□□□□□ -0.06
ACTN1-207ENST00000553290 PRR16Q569H4 304 aa14.7□□□□□ -0.06
ACTN1-207ENST00000553290 ZNF746Q6NUN9 644 aaPredicted RBP14.7□□□□□ -0.06
ACTN1-207ENST00000553290 POTEBQ6S5H4 581 aa14.7□□□□□ -0.06
ACTN1-207ENST00000553290 SMAP1Q8IYB5 467 aaPredicted RBP14.7□□□□□ -0.06
ACTN1-207ENST00000553290 IL17RAQ96F46 866 aa14.7□□□□□ -0.06
ACTN1-207ENST00000553290 TRANK1O15050 2925 aa14.7□□□□□ -0.06
ACTN1-207ENST00000553290 HBP1O60381 514 aa14.69□□□□□ -0.06
ACTN1-207ENST00000553290 PFKFB2O60825 505 aa14.69□□□□□ -0.06
ACTN1-207ENST00000553290 KRT76Q01546 638 aa14.69□□□□□ -0.06
ACTN1-207ENST00000553290 SCRN1Q12765 414 aa14.69□□□□□ -0.06
ACTN1-207ENST00000553290 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.69□□□□□ -0.069e-13■■□□□ 12.7
ACTN1-207ENST00000553290 TMCO2Q7Z6W1 182 aaPredicted RBP14.69□□□□□ -0.06
ACTN1-207ENST00000553290 BLIDQ8IZY5 108 aa14.69□□□□□ -0.06
ACTN1-207ENST00000553290 DAGLBQ8NCG7 672 aa14.69□□□□□ -0.06
ACTN1-207ENST00000553290 DNAJB3Q8WWF6 145 aa14.69□□□□□ -0.06
ACTN1-207ENST00000553290 IFIH1Q9BYX4 1025 aaKnown RBP14.69□□□□□ -0.06
ACTN1-207ENST00000553290 ZNF302Q9NR11 478 aa14.69□□□□□ -0.06
ACTN1-207ENST00000553290 TPCN1Q9ULQ1 816 aa14.69□□□□□ -0.06
ACTN1-207ENST00000553290 PCDHA2Q9Y5H9 948 aa14.69□□□□□ -0.06
ACTN1-207ENST00000553290 DLL1O00548 723 aa14.68□□□□□ -0.06
ACTN1-207ENST00000553290 PSAPP07602 524 aa14.68□□□□□ -0.06
ACTN1-207ENST00000553290 XBP1P17861 261 aa14.68□□□□□ -0.06
ACTN1-207ENST00000553290 MRPS6P82932 125 aaKnown RBP14.68□□□□□ -0.06
ACTN1-207ENST00000553290 MGAT3Q09327 533 aa14.68□□□□□ -0.06
ACTN1-207ENST00000553290 IER5Q5VY09 327 aa14.68□□□□□ -0.06
ACTN1-207ENST00000553290 SWSAP1Q6NVH7 229 aa14.68□□□□□ -0.06
ACTN1-207ENST00000553290 PDXDC2PQ6P474 469 aa14.68□□□□□ -0.06
ACTN1-207ENST00000553290 CCDC60Q8IWA6 550 aaPredicted RBP14.68□□□□□ -0.06
ACTN1-207ENST00000553290 MYOCDQ8IZQ8 938 aa14.68□□□□□ -0.06
ACTN1-207ENST00000553290 NME8Q8N427 588 aa14.68□□□□□ -0.06
ACTN1-207ENST00000553290 TBCKQ8TEA7 893 aa14.68□□□□□ -0.06
ACTN1-207ENST00000553290 ATP8B4Q8TF62 1192 aa14.68□□□□□ -0.06
ACTN1-207ENST00000553290 LENG9Q96B70 501 aa14.68□□□□□ -0.06
ACTN1-207ENST00000553290 UIMC1Q96RL1 719 aa14.68□□□□□ -0.06
ACTN1-207ENST00000553290 OSBPL7Q9BZF2 842 aa14.68□□□□□ -0.06
ACTN1-207ENST00000553290 INSL6Q9Y581 213 aa14.68□□□□□ -0.06
ACTN1-207ENST00000553290 PCDHA10Q9Y5I2 948 aa14.68□□□□□ -0.06
ACTN1-207ENST00000553290 SQORQ9Y6N5 450 aa14.68□□□□□ -0.06
ACTN1-207ENST00000553290 STK36Q9NRP7 1315 aa14.67□□□□□ -0.06
ACTN1-207ENST00000553290 MYH9P35579 1960 aaKnown RBP14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms