RNA–Protein interactions for RNA: ENST00000552742.5

PFDN5-218, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-218ENST00000552742 SAFBQ15424 915 aaKnown RBP eCLIP11.12□□□□□ -0.63
PFDN5-218ENST00000552742 LRCH2Q5VUJ6 765 aa11.12□□□□□ -0.63
PFDN5-218ENST00000552742 PPP4R3AQ6IN85 833 aa11.12□□□□□ -0.63
PFDN5-218ENST00000552742 ZNF746Q6NUN9 644 aaPredicted RBP11.12□□□□□ -0.63
PFDN5-218ENST00000552742 MIS18BP1Q6P0N0 1132 aa11.12□□□□□ -0.63
PFDN5-218ENST00000552742 MOXD1Q6UVY6 613 aa11.12□□□□□ -0.63
PFDN5-218ENST00000552742 PLPPR4Q7Z2D5 763 aa11.12□□□□□ -0.63
PFDN5-218ENST00000552742 SERINC5Q86VE9 423 aa11.12□□□□□ -0.63
PFDN5-218ENST00000552742 ETNPPLQ8TBG4 499 aa11.12□□□□□ -0.63
PFDN5-218ENST00000552742 VWCEQ96DN2 955 aa11.12□□□□□ -0.63
PFDN5-218ENST00000552742 RIT2Q99578 217 aa11.12□□□□□ -0.63
PFDN5-218ENST00000552742 UNC45AQ9H3U1 944 aa11.12□□□□□ -0.63
PFDN5-218ENST00000552742 IL23AQ9NPF7 189 aa11.12□□□□□ -0.63
PFDN5-218ENST00000552742 EMSYQ7Z589 1322 aa11.11□□□□□ -0.63
PFDN5-218ENST00000552742 PITPNM1O00562 1244 aa11.11□□□□□ -0.63
PFDN5-218ENST00000552742 WNT7AO00755 349 aa11.11□□□□□ -0.63
PFDN5-218ENST00000552742 CHMP2AO43633 222 aa11.11□□□□□ -0.63
PFDN5-218ENST00000552742 IQCF3P0C7M6 154 aa11.11□□□□□ -0.63
PFDN5-218ENST00000552742 GNAT1P11488 350 aa11.11□□□□□ -0.63
PFDN5-218ENST00000552742 CKBP12277 381 aa11.11□□□□□ -0.63
PFDN5-218ENST00000552742 INSRRP14616 1297 aa11.11□□□□□ -0.63
PFDN5-218ENST00000552742 ATP2B1P20020 1258 aa11.11□□□□□ -0.63
PFDN5-218ENST00000552742 ATP4AP20648 1035 aa11.11□□□□□ -0.63
PFDN5-218ENST00000552742 IGBP1P78318 339 aa11.11□□□□□ -0.63
PFDN5-218ENST00000552742 ADAM17P78536 824 aa11.11□□□□□ -0.63
PFDN5-218ENST00000552742 KRT76Q01546 638 aa11.11□□□□□ -0.63
PFDN5-218ENST00000552742 PPFIA1Q13136 1202 aa11.11□□□□□ -0.63
PFDN5-218ENST00000552742 TRIM71Q2Q1W2 868 aaKnown RBP11.11□□□□□ -0.63
PFDN5-218ENST00000552742 TMEM240Q5SV17 173 aa11.11□□□□□ -0.63
PFDN5-218ENST00000552742 MARCH8Q5T0T0 291 aa11.11□□□□□ -0.63
PFDN5-218ENST00000552742 FAM160B1Q5W0V3 765 aa11.11□□□□□ -0.63
PFDN5-218ENST00000552742 PDXDC2PQ6P474 469 aa11.11□□□□□ -0.63
PFDN5-218ENST00000552742 ZNF365Q70YC5 407 aa11.11□□□□□ -0.63
PFDN5-218ENST00000552742 DEFB128Q7Z7B8 93 aa11.11□□□□□ -0.63
PFDN5-218ENST00000552742 CCDC60Q8IWA6 550 aaPredicted RBP11.11□□□□□ -0.63
PFDN5-218ENST00000552742 LMBR1Q8WVP7 490 aa11.11□□□□□ -0.63
PFDN5-218ENST00000552742 TRAPPC12Q8WVT3 735 aa11.11□□□□□ -0.63
PFDN5-218ENST00000552742 ZBTB10Q96DT7 871 aa11.11□□□□□ -0.63
PFDN5-218ENST00000552742 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.11□□□□□ -0.631e-23■■■□□ 18.7
PFDN5-218ENST00000552742 TEKT3Q9BXF9 490 aa11.11□□□□□ -0.63
PFDN5-218ENST00000552742 ZNF302Q9NR11 478 aa11.11□□□□□ -0.63
PFDN5-218ENST00000552742 DISC1Q9NRI5 854 aa11.11□□□□□ -0.63
PFDN5-218ENST00000552742 SAMM50Q9Y512 469 aa11.11□□□□□ -0.63
PFDN5-218ENST00000552742 PCDHA10Q9Y5I2 948 aa11.11□□□□□ -0.63
PFDN5-218ENST00000552742 NRCAMQ92823 1304 aa11.1□□□□□ -0.63
PFDN5-218ENST00000552742 LOXHD1Q8IVV2 1947 aa11.1□□□□□ -0.63
PFDN5-218ENST00000552742 POTEB3A0JP26 581 aa11.1□□□□□ -0.63
PFDN5-218ENST00000552742 SOX1O00570 391 aaPredicted RBP11.1□□□□□ -0.63
PFDN5-218ENST00000552742 MARCH6O60337 910 aa11.1□□□□□ -0.63
PFDN5-218ENST00000552742 FGBP02675 491 aa11.1□□□□□ -0.63
PFDN5-218ENST00000552742 PSAPP07602 524 aa11.1□□□□□ -0.63
PFDN5-218ENST00000552742 SELPP16109 830 aa11.1□□□□□ -0.63
PFDN5-218ENST00000552742 GCFC2P16383 781 aaKnown RBP11.1□□□□□ -0.63
PFDN5-218ENST00000552742 GJB2P29033 226 aa11.1□□□□□ -0.63
PFDN5-218ENST00000552742 THPOP40225 353 aa11.1□□□□□ -0.63
PFDN5-218ENST00000552742 GPNMBQ14956 572 aa11.1□□□□□ -0.63
PFDN5-218ENST00000552742 GRIK4Q16099 956 aa11.1□□□□□ -0.63
PFDN5-218ENST00000552742 ZNF618Q5T7W0 954 aa11.1□□□□□ -0.63
PFDN5-218ENST00000552742 POTEBQ6S5H4 581 aa11.1□□□□□ -0.63
PFDN5-218ENST00000552742 RUFY4Q6ZNE9 571 aa11.1□□□□□ -0.63
PFDN5-218ENST00000552742 TRMT1LQ7Z2T5 733 aaKnown RBP11.1□□□□□ -0.63
PFDN5-218ENST00000552742 POTEDQ86YR6 584 aa11.1□□□□□ -0.63
PFDN5-218ENST00000552742 SMAP1Q8IYB5 467 aaPredicted RBP11.1□□□□□ -0.63
PFDN5-218ENST00000552742 RPUSD2Q8IZ73 545 aaKnown RBP11.1□□□□□ -0.63
PFDN5-218ENST00000552742 CCDC155Q8N6L0 562 aa11.1□□□□□ -0.63
PFDN5-218ENST00000552742 CAGE1Q8TC20 777 aa11.1□□□□□ -0.63
PFDN5-218ENST00000552742 AFAP1L1Q8TED9 768 aa11.1□□□□□ -0.63
PFDN5-218ENST00000552742 HAS1Q92839 578 aa11.1□□□□□ -0.63
PFDN5-218ENST00000552742 FAM20AQ96MK3 541 aa11.1□□□□□ -0.63
PFDN5-218ENST00000552742 FOXP1Q9H334 677 aaPredicted RBP11.1□□□□□ -0.63
PFDN5-218ENST00000552742 KCNMB3Q9NPA1 279 aa11.1□□□□□ -0.63
PFDN5-218ENST00000552742 GABBR1Q9UBS5 961 aa11.1□□□□□ -0.63
PFDN5-218ENST00000552742 TCEAL9Q9UHQ7 104 aa11.1□□□□□ -0.63
PFDN5-218ENST00000552742 SMC3Q9UQE7 1217 aa11.1□□□□□ -0.63
PFDN5-218ENST00000552742 TRPC6Q9Y210 931 aa11.1□□□□□ -0.63
PFDN5-218ENST00000552742 MAFBQ9Y5Q3 323 aaPredicted RBP11.1□□□□□ -0.63
PFDN5-218ENST00000552742 TRANK1O15050 2925 aa11.1□□□□□ -0.63
PFDN5-218ENST00000552742 CHD7Q9P2D1 2997 aa11.09□□□□□ -0.63
PFDN5-218ENST00000552742 RRN3P2A6NIE6 340 aa11.09□□□□□ -0.63
PFDN5-218ENST00000552742 WDR64B1ANS9 1081 aa11.09□□□□□ -0.63
PFDN5-218ENST00000552742 KIF28PB7ZC32 967 aa11.09□□□□□ -0.63
PFDN5-218ENST00000552742 FXR1P51114 621 aaKnown RBP eCLIP11.09□□□□□ -0.63
PFDN5-218ENST00000552742 CUL4AQ13619 759 aa11.09□□□□□ -0.63
PFDN5-218ENST00000552742 TRAF7Q6Q0C0 670 aa11.09□□□□□ -0.63
PFDN5-218ENST00000552742 B3GNT9Q6UX72 402 aa11.09□□□□□ -0.63
PFDN5-218ENST00000552742 OTOP2Q7RTS6 562 aa11.09□□□□□ -0.63
PFDN5-218ENST00000552742 MIER3Q7Z3K6 550 aa11.09□□□□□ -0.63
PFDN5-218ENST00000552742 CKAP2LQ8IYA6 745 aa11.09□□□□□ -0.63
PFDN5-218ENST00000552742 NAP1L4Q99733 375 aaKnown RBP11.09□□□□□ -0.63
PFDN5-218ENST00000552742 FTOQ9C0B1 505 aaKnown RBP eCLIP11.09□□□□□ -0.63
PFDN5-218ENST00000552742 KIF3AQ9Y496 699 aa11.09□□□□□ -0.63
PFDN5-218ENST00000552742 MBLAC1A4D2B0 266 aaPredicted RBP11.08□□□□□ -0.64
PFDN5-218ENST00000552742 RSPH10B2B2RC85 870 aa11.08□□□□□ -0.64
PFDN5-218ENST00000552742 ZBTB42B2RXF5 422 aa11.08□□□□□ -0.64
PFDN5-218ENST00000552742 EML1O00423 815 aa11.08□□□□□ -0.64
PFDN5-218ENST00000552742 TBX3O15119 743 aa11.08□□□□□ -0.64
PFDN5-218ENST00000552742 ZNF862O60290 1169 aa11.08□□□□□ -0.64
PFDN5-218ENST00000552742 HBP1O60381 514 aa11.08□□□□□ -0.64
PFDN5-218ENST00000552742 BAG4O95429 457 aaKnown RBP11.08□□□□□ -0.64
PFDN5-218ENST00000552742 RSPH10BP0C881 870 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms