RNA–Protein interactions for RNA: ENST00000552548.5

PFDN5-217, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 497 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-217ENST00000552548 GPRC5CQ9NQ84 441 aa7.96□□□□□ -1.14
PFDN5-217ENST00000552548 PAK6Q9NQU5 681 aaPredicted RBP7.96□□□□□ -1.14
PFDN5-217ENST00000552548 KIAA1024Q9UPX6 916 aa7.96□□□□□ -1.14
PFDN5-217ENST00000552548 USP20Q9Y2K6 914 aa7.96□□□□□ -1.14
PFDN5-217ENST00000552548 NFASCO94856 1347 aa7.96□□□□□ -1.14
PFDN5-217ENST00000552548 RSPH10B2B2RC85 870 aa7.95□□□□□ -1.14
PFDN5-217ENST00000552548 ACTN4O43707 911 aaKnown RBP7.95□□□□□ -1.14
PFDN5-217ENST00000552548 CUTAO60888 179 aa7.95□□□□□ -1.14
PFDN5-217ENST00000552548 PPP6R2O75170 966 aa7.95□□□□□ -1.14
PFDN5-217ENST00000552548 RSPH10BP0C881 870 aa7.95□□□□□ -1.14
PFDN5-217ENST00000552548 AKR1A1P14550 325 aa7.95□□□□□ -1.14
PFDN5-217ENST00000552548 ATN1P54259 1190 aaPredicted RBP7.95□□□□□ -1.14
PFDN5-217ENST00000552548 GJA9P57773 515 aa7.95□□□□□ -1.14
PFDN5-217ENST00000552548 IGBP1P78318 339 aa7.95□□□□□ -1.14
PFDN5-217ENST00000552548 MKRN4PQ13434 485 aaPredicted RBP7.95□□□□□ -1.14
PFDN5-217ENST00000552548 EPHA7Q15375 998 aa7.95□□□□□ -1.14
PFDN5-217ENST00000552548 CAMK4Q16566 473 aa7.95□□□□□ -1.14
PFDN5-217ENST00000552548 FSCN1Q16658 493 aaKnown RBP7.95□□□□□ -1.14
PFDN5-217ENST00000552548 GNPTABQ3T906 1256 aa7.95□□□□□ -1.14
PFDN5-217ENST00000552548 ARSHQ5FYA8 562 aa7.95□□□□□ -1.14
PFDN5-217ENST00000552548 XRRA1Q6P2D8 792 aa7.95□□□□□ -1.14
PFDN5-217ENST00000552548 PDXDC2PQ6P474 469 aa7.95□□□□□ -1.14
PFDN5-217ENST00000552548 RUFY4Q6ZNE9 571 aa7.95□□□□□ -1.14
PFDN5-217ENST00000552548 ANO5Q75V66 913 aa7.95□□□□□ -1.14
PFDN5-217ENST00000552548 FMR1NBQ8N0W7 255 aaPredicted RBP7.95□□□□□ -1.14
PFDN5-217ENST00000552548 MSL3Q8N5Y2 521 aaKnown RBP7.95□□□□□ -1.14
PFDN5-217ENST00000552548 TMEM87AQ8NBN3 555 aa7.95□□□□□ -1.14
PFDN5-217ENST00000552548 GLIS3Q8NEA6 775 aa7.95□□□□□ -1.14
PFDN5-217ENST00000552548 DHX58Q96C10 678 aa7.95□□□□□ -1.14
PFDN5-217ENST00000552548 ARMC5Q96C12 935 aa7.95□□□□□ -1.14
PFDN5-217ENST00000552548 FAM20AQ96MK3 541 aa7.95□□□□□ -1.14
PFDN5-217ENST00000552548 RIT2Q99578 217 aa7.95□□□□□ -1.14
PFDN5-217ENST00000552548 UPF3AQ9H1J1 476 aaKnown RBP7.95□□□□□ -1.14
PFDN5-217ENST00000552548 HMX1Q9NP08 348 aaPredicted RBP7.95□□□□□ -1.14
PFDN5-217ENST00000552548 XPNPEP3Q9NQH7 507 aa7.95□□□□□ -1.14
PFDN5-217ENST00000552548 DDX19AQ9NUU7 478 aaKnown RBP7.95□□□□□ -1.14
PFDN5-217ENST00000552548 SLC5A4Q9NY91 659 aa7.95□□□□□ -1.14
PFDN5-217ENST00000552548 HPSEQ9Y251 543 aa7.95□□□□□ -1.14
PFDN5-217ENST00000552548 SAMM50Q9Y512 469 aa7.95□□□□□ -1.14
PFDN5-217ENST00000552548 ELP1O95163 1332 aa7.95□□□□□ -1.14
PFDN5-217ENST00000552548 MYMKA6NI61 221 aa7.94□□□□□ -1.14
PFDN5-217ENST00000552548 A6NJR5 290 aa7.94□□□□□ -1.14
PFDN5-217ENST00000552548 SFI1A8K8P3 1242 aa7.94□□□□□ -1.14
PFDN5-217ENST00000552548 DDX11L8A8MPP1 907 aa7.94□□□□□ -1.14
PFDN5-217ENST00000552548 TBX3O15119 743 aa7.94□□□□□ -1.14
PFDN5-217ENST00000552548 POLR2DO15514 142 aaKnown RBP7.94□□□□□ -1.14
PFDN5-217ENST00000552548 DUSP11O75319 330 aaKnown RBP7.94□□□□□ -1.14
PFDN5-217ENST00000552548 LGR5O75473 907 aa7.94□□□□□ -1.14
PFDN5-217ENST00000552548 ASGR1P07306 291 aa7.94□□□□□ -1.14
PFDN5-217ENST00000552548 PRPHP41219 470 aa7.94□□□□□ -1.14
PFDN5-217ENST00000552548 AFMP43652 599 aa7.94□□□□□ -1.14
PFDN5-217ENST00000552548 PURAQ00577 322 aaKnown RBP7.94□□□□□ -1.14
PFDN5-217ENST00000552548 SETQ01105 290 aaPredicted RBP7.94□□□□□ -1.14
PFDN5-217ENST00000552548 PRKCEQ02156 737 aa7.94□□□□□ -1.14
PFDN5-217ENST00000552548 GNASQ5JWF2 1037 aa7.94□□□□□ -1.14
PFDN5-217ENST00000552548 MARCH8Q5T0T0 291 aa7.94□□□□□ -1.14
PFDN5-217ENST00000552548 ISM2Q6H9L7 571 aa7.94□□□□□ -1.14
PFDN5-217ENST00000552548 KSR1Q8IVT5 923 aa7.94□□□□□ -1.14
PFDN5-217ENST00000552548 LRRC71Q8N4P6 559 aa7.94□□□□□ -1.14
PFDN5-217ENST00000552548 PPTC7Q8NI37 304 aa7.94□□□□□ -1.14
PFDN5-217ENST00000552548 U2AF1L4Q8WU68 220 aaKnown RBP7.94□□□□□ -1.14
PFDN5-217ENST00000552548 SEPT1Q8WYJ6 367 aa7.94□□□□□ -1.14
PFDN5-217ENST00000552548 BSNDQ8WZ55 320 aa7.94□□□□□ -1.14
PFDN5-217ENST00000552548 SENP7Q9BQF6 1050 aa7.94□□□□□ -1.14
PFDN5-217ENST00000552548 SDF4Q9BRK5 362 aa7.94□□□□□ -1.14
PFDN5-217ENST00000552548 PRDM10Q9NQV6 1147 aa7.94□□□□□ -1.14
PFDN5-217ENST00000552548 XPNPEP1Q9NQW7 623 aa7.94□□□□□ -1.14
PFDN5-217ENST00000552548 ZNF302Q9NR11 478 aa7.94□□□□□ -1.14
PFDN5-217ENST00000552548 SETD4Q9NVD3 440 aa7.94□□□□□ -1.14
PFDN5-217ENST00000552548 TMEM63CQ9P1W3 806 aa7.94□□□□□ -1.14
PFDN5-217ENST00000552548 IGSF9BQ9UPX0 1349 aa7.94□□□□□ -1.14
PFDN5-217ENST00000552548 CSDE1O75534 798 aaKnown RBP7.93□□□□□ -1.14
PFDN5-217ENST00000552548 STAM2O75886 525 aa7.93□□□□□ -1.14
PFDN5-217ENST00000552548 GNRH1P01148 92 aa7.93□□□□□ -1.14
PFDN5-217ENST00000552548 EDN1P05305 212 aa7.93□□□□□ -1.14
PFDN5-217ENST00000552548 SSBP05455 408 aaKnown RBP eCLIP7.93□□□□□ -1.14
PFDN5-217ENST00000552548 RARBP10826 455 aa7.93□□□□□ -1.14
PFDN5-217ENST00000552548 HOXD8P13378 290 aaPredicted RBP7.93□□□□□ -1.14
PFDN5-217ENST00000552548 INSRRP14616 1297 aa7.93□□□□□ -1.14
PFDN5-217ENST00000552548 CMA1P23946 247 aa7.93□□□□□ -1.14
PFDN5-217ENST00000552548 LONP1P36776 959 aaKnown RBP7.93□□□□□ -1.14
PFDN5-217ENST00000552548 PSEN2P49810 448 aa7.93□□□□□ -1.14
PFDN5-217ENST00000552548 STAT5BP51692 787 aa7.93□□□□□ -1.14
PFDN5-217ENST00000552548 TMEM62Q0P6H9 643 aa7.93□□□□□ -1.14
PFDN5-217ENST00000552548 PNOCQ13519 176 aa7.93□□□□□ -1.14
PFDN5-217ENST00000552548 CUL4BQ13620 913 aa7.93□□□□□ -1.14
PFDN5-217ENST00000552548 LAMC2Q13753 1193 aa7.93□□□□□ -1.14
PFDN5-217ENST00000552548 NEDD9Q14511 834 aa7.93□□□□□ -1.14
PFDN5-217ENST00000552548 MFSD10Q14728 455 aa7.93□□□□□ -1.14
PFDN5-217ENST00000552548 NBPF20Q3BBV1 942 aa7.93□□□□□ -1.14
PFDN5-217ENST00000552548 MTERF2Q49AM1 385 aa7.93□□□□□ -1.14
PFDN5-217ENST00000552548 ARL6IP4Q66PJ3 421 aaKnown RBP7.93□□□□□ -1.14
PFDN5-217ENST00000552548 ADALQ6DHV7 355 aa7.93□□□□□ -1.14
PFDN5-217ENST00000552548 MCTP2Q6DN12 878 aa7.93□□□□□ -1.14
PFDN5-217ENST00000552548 ZNF746Q6NUN9 644 aaPredicted RBP7.93□□□□□ -1.14
PFDN5-217ENST00000552548 DYMQ7RTS9 669 aa7.93□□□□□ -1.14
PFDN5-217ENST00000552548 SLFN12Q8IYM2 578 aa7.93□□□□□ -1.14
PFDN5-217ENST00000552548 DAW1Q8N136 415 aa7.93□□□□□ -1.14
PFDN5-217ENST00000552548 KCNG4Q8TDN1 519 aa7.93□□□□□ -1.14
PFDN5-217ENST00000552548 TMEM143Q96AN5 459 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms