RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-223ENST00000552480 KCND2Q9NZV8 630 aa14.12□□□□□ -0.15
CACNB3-223ENST00000552480 WRAP73Q9P2S5 460 aaPredicted RBP14.12□□□□□ -0.15
CACNB3-223ENST00000552480 MAPK8IP1Q9UQF2 711 aa14.12□□□□□ -0.15
CACNB3-223ENST00000552480 SAMM50Q9Y512 469 aa14.12□□□□□ -0.15
CACNB3-223ENST00000552480 MANSC4A6NHS7 340 aaPredicted RBP14.11□□□□□ -0.15
CACNB3-223ENST00000552480 TPM3P06753 285 aa14.11□□□□□ -0.15
CACNB3-223ENST00000552480 CDK11BP21127 795 aaKnown RBP14.11□□□□□ -0.15
CACNB3-223ENST00000552480 ZNF157P51786 506 aaPredicted RBP14.11□□□□□ -0.15
CACNB3-223ENST00000552480 WDR78Q5VTH9 848 aa14.11□□□□□ -0.15
CACNB3-223ENST00000552480 RINT1Q6NUQ1 792 aa14.11□□□□□ -0.15
CACNB3-223ENST00000552480 DRC7Q8IY82 874 aa14.11□□□□□ -0.15
CACNB3-223ENST00000552480 ANKRD13CQ8N6S4 541 aa14.11□□□□□ -0.15
CACNB3-223ENST00000552480 NOC3LQ8WTT2 800 aaKnown RBP14.11□□□□□ -0.15
CACNB3-223ENST00000552480 P2RX5Q93086 422 aa14.11□□□□□ -0.15
CACNB3-223ENST00000552480 HPS3Q969F9 1004 aa14.11□□□□□ -0.15
CACNB3-223ENST00000552480 FGD4Q96M96 766 aa14.11□□□□□ -0.15
CACNB3-223ENST00000552480 PTPN18Q99952 460 aa14.11□□□□□ -0.15
CACNB3-223ENST00000552480 REEP2Q9BRK0 252 aa14.11□□□□□ -0.15
CACNB3-223ENST00000552480 RUSC1Q9BVN2 902 aa14.11□□□□□ -0.15
CACNB3-223ENST00000552480 XPO4Q9C0E2 1151 aaKnown RBP14.11□□□□□ -0.15
CACNB3-223ENST00000552480 PORCNQ9H237 461 aa14.11□□□□□ -0.15
CACNB3-223ENST00000552480 EFCC1Q9HA90 598 aa14.11□□□□□ -0.15
CACNB3-223ENST00000552480 JPH1Q9HDC5 661 aaPredicted RBP14.11□□□□□ -0.15
CACNB3-223ENST00000552480 ZCCHC17Q9NP64 241 aaKnown RBP14.11□□□□□ -0.15
CACNB3-223ENST00000552480 SLC9A2Q9UBY0 812 aa14.11□□□□□ -0.15
CACNB3-223ENST00000552480 DBR1Q9UK59 544 aaKnown RBP14.11□□□□□ -0.15
CACNB3-223ENST00000552480 PCDHA10Q9Y5I2 948 aa14.11□□□□□ -0.15
CACNB3-223ENST00000552480 KIAA1217Q5T5P2 1943 aa14.11□□□□□ -0.15
CACNB3-223ENST00000552480 PLXNB2O15031 1838 aa14.11□□□□□ -0.15
CACNB3-223ENST00000552480 ARHGEF35A5YM69 484 aa14.1□□□□□ -0.15
CACNB3-223ENST00000552480 DKC1O60832 514 aaKnown RBP eCLIP14.1□□□□□ -0.15
CACNB3-223ENST00000552480 TBCAO75347 108 aaKnown RBP14.1□□□□□ -0.15
CACNB3-223ENST00000552480 PGK2P07205 417 aa14.1□□□□□ -0.15
CACNB3-223ENST00000552480 PSAPP07602 524 aa14.1□□□□□ -0.15
CACNB3-223ENST00000552480 GAP43P17677 238 aa14.1□□□□□ -0.15
CACNB3-223ENST00000552480 UBASH3AP57075 661 aa14.1□□□□□ -0.15
CACNB3-223ENST00000552480 PSMC5P62195 406 aa14.1□□□□□ -0.15
CACNB3-223ENST00000552480 CACNB1Q02641 598 aaPredicted RBP14.1□□□□□ -0.15
CACNB3-223ENST00000552480 SPAG1Q07617 926 aa14.1□□□□□ -0.15
CACNB3-223ENST00000552480 FSTL1Q12841 308 aa14.1□□□□□ -0.15
CACNB3-223ENST00000552480 RGMBQ6NW40 437 aa14.1□□□□□ -0.15
CACNB3-223ENST00000552480 TTI2Q6NXR4 508 aa14.1□□□□□ -0.15
CACNB3-223ENST00000552480 C1orf186Q6ZWK4 172 aa14.1□□□□□ -0.15
CACNB3-223ENST00000552480 SAPCD2Q86UD0 394 aa14.1□□□□□ -0.15
CACNB3-223ENST00000552480 C4orf19Q8IY42 314 aa14.1□□□□□ -0.15
CACNB3-223ENST00000552480 ABRAQ8N0Z2 381 aa14.1□□□□□ -0.15
CACNB3-223ENST00000552480 SPC24Q8NBT2 197 aa14.1□□□□□ -0.15
CACNB3-223ENST00000552480 MORC4Q8TE76 937 aa14.1□□□□□ -0.15
CACNB3-223ENST00000552480 TRIM47Q96LD4 638 aa14.1□□□□□ -0.15
CACNB3-223ENST00000552480 PCDHA2Q9Y5H9 948 aa14.1□□□□□ -0.15
CACNB3-223ENST00000552480 TRIM49BA6NDI0 452 aa14.09□□□□□ -0.15
CACNB3-223ENST00000552480 ASB14A6NK59 587 aa14.09□□□□□ -0.15
CACNB3-223ENST00000552480 ZBTB39O15060 712 aa14.09□□□□□ -0.15
CACNB3-223ENST00000552480 COBLO75128 1261 aa14.09□□□□□ -0.15
CACNB3-223ENST00000552480 KIF20AO95235 890 aa14.09□□□□□ -0.15
CACNB3-223ENST00000552480 SLC10A3P09131 477 aa14.09□□□□□ -0.15
CACNB3-223ENST00000552480 GUCY2CP25092 1073 aa14.09□□□□□ -0.15
CACNB3-223ENST00000552480 PMS1P54277 932 aaKnown RBP14.09□□□□□ -0.15
CACNB3-223ENST00000552480 RAD51AP2Q09MP3 1159 aa14.09□□□□□ -0.15
CACNB3-223ENST00000552480 UGCGQ16739 394 aa14.09□□□□□ -0.15
CACNB3-223ENST00000552480 FAM110CQ1W6H9 321 aa14.09□□□□□ -0.15
CACNB3-223ENST00000552480 HERC4Q5GLZ8 1057 aaPredicted RBP14.09□□□□□ -0.15
CACNB3-223ENST00000552480 CENPPQ6IPU0 288 aa14.09□□□□□ -0.15
CACNB3-223ENST00000552480 FOXR2Q6PJQ5 311 aa14.09□□□□□ -0.15
CACNB3-223ENST00000552480 SEPT14Q6ZU15 432 aa14.09□□□□□ -0.15
CACNB3-223ENST00000552480 MYOCDQ8IZQ8 938 aa14.09□□□□□ -0.15
CACNB3-223ENST00000552480 ATP6V0A1Q93050 837 aa14.09□□□□□ -0.15
CACNB3-223ENST00000552480 CTAGE1Q96RT6 745 aa14.09□□□□□ -0.15
CACNB3-223ENST00000552480 THAP9Q9H5L6 903 aa14.09□□□□□ -0.15
CACNB3-223ENST00000552480 ODF2LQ9ULJ1 636 aa14.09□□□□□ -0.15
CACNB3-223ENST00000552480 COL4A3BPQ9Y5P4 624 aa14.09□□□□□ -0.15
CACNB3-223ENST00000552480 TLL2Q9Y6L7 1015 aa14.09□□□□□ -0.15
CACNB3-223ENST00000552480 STRNO43815 780 aa14.08□□□□□ -0.16
CACNB3-223ENST00000552480 FAM13AO94988 1023 aa14.08□□□□□ -0.16
CACNB3-223ENST00000552480 TGFB3P10600 412 aa14.08□□□□□ -0.16
CACNB3-223ENST00000552480 ACTR2P61160 394 aa14.08□□□□□ -0.16
CACNB3-223ENST00000552480 SP2Q02086 613 aa14.08□□□□□ -0.16
CACNB3-223ENST00000552480 HSP90AA4PQ58FG1 418 aa14.08□□□□□ -0.16
CACNB3-223ENST00000552480 MIS18BP1Q6P0N0 1132 aa14.08□□□□□ -0.16
CACNB3-223ENST00000552480 KCNV1Q6PIU1 500 aa14.08□□□□□ -0.16
CACNB3-223ENST00000552480 ABHD15Q6UXT9 468 aa14.08□□□□□ -0.16
CACNB3-223ENST00000552480 SFR1Q86XK3 245 aa14.08□□□□□ -0.16
CACNB3-223ENST00000552480 ANKRD20A12PQ8NF67 263 aa14.08□□□□□ -0.16
CACNB3-223ENST00000552480 NAP1L5Q96NT1 182 aaPredicted RBP14.08□□□□□ -0.16
CACNB3-223ENST00000552480 DUSP9Q99956 384 aaKnown RBP14.08□□□□□ -0.16
CACNB3-223ENST00000552480 SEMA6BQ9H3T3 888 aa14.08□□□□□ -0.16
CACNB3-223ENST00000552480 ZHX3Q9H4I2 956 aa14.08□□□□□ -0.16
CACNB3-223ENST00000552480 GPBP1L1Q9HC44 474 aaPredicted RBP14.08□□□□□ -0.16
CACNB3-223ENST00000552480 ANKEF1Q9NU02 776 aa14.08□□□□□ -0.16
CACNB3-223ENST00000552480 IMPACTQ9P2X3 320 aa14.08□□□□□ -0.16
CACNB3-223ENST00000552480 SEL1LQ9UBV2 794 aa14.08□□□□□ -0.16
CACNB3-223ENST00000552480 LIMA1Q9UHB6 759 aaKnown RBP14.08□□□□□ -0.16
CACNB3-223ENST00000552480 ADGRA2Q96PE1 1338 aa14.08□□□□□ -0.16
CACNB3-223ENST00000552480 ZNF236Q9UL36 1845 aa14.08□□□□□ -0.16
CACNB3-223ENST00000552480 A0A1B0GTH6 734 aa14.07□□□□□ -0.16
CACNB3-223ENST00000552480 KCNJ18B7U540 433 aa14.07□□□□□ -0.16
CACNB3-223ENST00000552480 ATG7O95352 703 aa14.07□□□□□ -0.16
CACNB3-223ENST00000552480 SUPT20HL2P0C7V6 817 aa14.07□□□□□ -0.16
CACNB3-223ENST00000552480 UBA1P22314 1058 aaKnown RBP14.07□□□□□ -0.16
CACNB3-223ENST00000552480 ADORA2AP29274 412 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms