RNA–Protein interactions for RNA: ENST00000552448.1

TUBA1C-209, Transcript of tubulin alpha 1c, humanhuman

TSL 3

Gene TUBA1C, Length 1,800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1C-209ENST00000552448 WHAMMQ8TF30 809 aa12.11□□□□□ -0.47
TUBA1C-209ENST00000552448 MKL1Q969V6 931 aa12.11□□□□□ -0.47
TUBA1C-209ENST00000552448 ARL8AQ96BM9 186 aa12.11□□□□□ -0.47
TUBA1C-209ENST00000552448 ATP6V1G3Q96LB4 118 aa12.11□□□□□ -0.47
TUBA1C-209ENST00000552448 GDAP1L1Q96MZ0 367 aa12.11□□□□□ -0.47
TUBA1C-209ENST00000552448 MTMR9Q96QG7 549 aa12.11□□□□□ -0.47
TUBA1C-209ENST00000552448 PLIN2Q99541 437 aa12.11□□□□□ -0.47
TUBA1C-209ENST00000552448 CUEDC2Q9H467 287 aa12.11□□□□□ -0.47
TUBA1C-209ENST00000552448 RIC8AQ9NPQ8 531 aa12.11□□□□□ -0.47
TUBA1C-209ENST00000552448 HOMER3Q9NSC5 361 aa12.11□□□□□ -0.47
TUBA1C-209ENST00000552448 GDAQ9Y2T3 454 aa12.11□□□□□ -0.47
TUBA1C-209ENST00000552448 HYOU1Q9Y4L1 999 aa12.11□□□□□ -0.47
TUBA1C-209ENST00000552448 KLHL33A6NCF5 533 aa12.1□□□□□ -0.47
TUBA1C-209ENST00000552448 SPDYE2BA6NHP3 402 aa12.1□□□□□ -0.47
TUBA1C-209ENST00000552448 FAM196BA6NMK8 535 aa12.1□□□□□ -0.47
TUBA1C-209ENST00000552448 SRGAP2O75044 1071 aa12.1□□□□□ -0.47
TUBA1C-209ENST00000552448 ZMYND10O75800 440 aa12.1□□□□□ -0.47
TUBA1C-209ENST00000552448 DNAJC8O75937 253 aaPredicted RBP12.1□□□□□ -0.47
TUBA1C-209ENST00000552448 SPDYE6P0CI01 402 aa12.1□□□□□ -0.47
TUBA1C-209ENST00000552448 PLCG1P19174 1290 aa12.1□□□□□ -0.47
TUBA1C-209ENST00000552448 SLC16A2P36021 539 aa12.1□□□□□ -0.47
TUBA1C-209ENST00000552448 PRCPP42785 496 aa12.1□□□□□ -0.47
TUBA1C-209ENST00000552448 PTGER2P43116 358 aa12.1□□□□□ -0.47
TUBA1C-209ENST00000552448 CLK2P49760 499 aaKnown RBP12.1□□□□□ -0.47
TUBA1C-209ENST00000552448 DNM2P50570 870 aa12.1□□□□□ -0.47
TUBA1C-209ENST00000552448 C2orf54Q08AI8 447 aa12.1□□□□□ -0.47
TUBA1C-209ENST00000552448 GRIK3Q13003 919 aa12.1□□□□□ -0.47
TUBA1C-209ENST00000552448 XRCC4Q13426 336 aa12.1□□□□□ -0.47
TUBA1C-209ENST00000552448 SPA17Q15506 151 aa12.1□□□□□ -0.47
TUBA1C-209ENST00000552448 SHROOM1Q2M3G4 852 aaPredicted RBP12.1□□□□□ -0.47
TUBA1C-209ENST00000552448 CCDC181Q5TID7 509 aa12.1□□□□□ -0.47
TUBA1C-209ENST00000552448 FKBP1CQ5VVH2 108 aa12.1□□□□□ -0.47
TUBA1C-209ENST00000552448 TATDN1Q6P1N9 297 aa12.1□□□□□ -0.47
TUBA1C-209ENST00000552448 KCTD1Q719H9 257 aa12.1□□□□□ -0.47
TUBA1C-209ENST00000552448 NELFBQ8WX92 580 aa12.1□□□□□ -0.47
TUBA1C-209ENST00000552448 FAM212AQ96EL1 285 aa12.1□□□□□ -0.47
TUBA1C-209ENST00000552448 RNPC3Q96LT9 517 aaKnown RBP12.1□□□□□ -0.47
TUBA1C-209ENST00000552448 ZIM3Q96PE6 472 aa12.1□□□□□ -0.47
TUBA1C-209ENST00000552448 CHP1Q99653 195 aa12.1□□□□□ -0.47
TUBA1C-209ENST00000552448 MMTAG2Q9BU76 263 aaKnown RBP12.1□□□□□ -0.47
TUBA1C-209ENST00000552448 MAGEF1Q9HAY2 307 aa12.1□□□□□ -0.47
TUBA1C-209ENST00000552448 NYAP2Q9P242 653 aa12.1□□□□□ -0.47
TUBA1C-209ENST00000552448 DDX20Q9UHI6 824 aaKnown RBP12.1□□□□□ -0.47
TUBA1C-209ENST00000552448 TTC26A0AVF1 554 aa12.09□□□□□ -0.47
TUBA1C-209ENST00000552448 USP17L10C9JJH3 530 aa12.09□□□□□ -0.47
TUBA1C-209ENST00000552448 PDE2AO00408 941 aaPredicted RBP12.09□□□□□ -0.47
TUBA1C-209ENST00000552448 ZBTB5O15062 677 aa12.09□□□□□ -0.47
TUBA1C-209ENST00000552448 COBLO75128 1261 aa12.09□□□□□ -0.47
TUBA1C-209ENST00000552448 RAD17O75943 681 aa12.09□□□□□ -0.47
TUBA1C-209ENST00000552448 RHOBTB3O94955 611 aa12.09□□□□□ -0.47
TUBA1C-209ENST00000552448 RPS12P25398 132 aaKnown RBP12.09□□□□□ -0.47
TUBA1C-209ENST00000552448 GBP2P32456 591 aaPredicted RBP12.09□□□□□ -0.47
TUBA1C-209ENST00000552448 TECP42680 631 aa12.09□□□□□ -0.47
TUBA1C-209ENST00000552448 IFT88Q13099 833 aa12.09□□□□□ -0.47
TUBA1C-209ENST00000552448 DLGAP5Q15398 846 aa12.09□□□□□ -0.47
TUBA1C-209ENST00000552448 CCDC96Q2M329 555 aa12.09□□□□□ -0.47
TUBA1C-209ENST00000552448 CERKLQ49MI3 558 aaPredicted RBP12.09□□□□□ -0.47
TUBA1C-209ENST00000552448 FIGNQ5HY92 759 aa12.09□□□□□ -0.47
TUBA1C-209ENST00000552448 C8orf74Q6P047 294 aa12.09□□□□□ -0.47
TUBA1C-209ENST00000552448 CEP57Q86XR8 500 aa12.09□□□□□ -0.47
TUBA1C-209ENST00000552448 SIAH1Q8IUQ4 282 aa12.09□□□□□ -0.47
TUBA1C-209ENST00000552448 GSPT2Q8IYD1 628 aaKnown RBP12.09□□□□□ -0.47
TUBA1C-209ENST00000552448 ADSSL1Q8N142 457 aa12.09□□□□□ -0.47
TUBA1C-209ENST00000552448 TCP11Q8WWU5 503 aa12.09□□□□□ -0.47
TUBA1C-209ENST00000552448 SH3GL3Q99963 347 aa12.09□□□□□ -0.47
TUBA1C-209ENST00000552448 LRRC1Q9BTT6 524 aa12.09□□□□□ -0.47
TUBA1C-209ENST00000552448 VPS16Q9H269 839 aa12.09□□□□□ -0.47
TUBA1C-209ENST00000552448 KDM4CQ9H3R0 1056 aa12.09□□□□□ -0.47
TUBA1C-209ENST00000552448 THAP9Q9H5L6 903 aa12.09□□□□□ -0.47
TUBA1C-209ENST00000552448 KANSL2Q9H9L4 492 aa12.09□□□□□ -0.47
TUBA1C-209ENST00000552448 SPATS2LQ9NUQ6 558 aaKnown RBP12.09□□□□□ -0.47
TUBA1C-209ENST00000552448 PPP1R1BQ9UD71 204 aaPredicted RBP12.09□□□□□ -0.47
TUBA1C-209ENST00000552448 A0A1W2PQJ5 194 aa12.09□□□□□ -0.47
TUBA1C-209ENST00000552448 GMNCA6NCL1 334 aa12.09□□□□□ -0.47
TUBA1C-209ENST00000552448 SLC37A4O43826 429 aa12.09□□□□□ -0.47
TUBA1C-209ENST00000552448 MGRN1O60291 552 aa12.09□□□□□ -0.47
TUBA1C-209ENST00000552448 TDP2O95551 362 aa12.09□□□□□ -0.47
TUBA1C-209ENST00000552448 EEF2P13639 858 aaKnown RBP12.09□□□□□ -0.47
TUBA1C-209ENST00000552448 FXR2P51116 673 aaKnown RBP eCLIP12.09□□□□□ -0.473e-9■□□□□ 9.4
TUBA1C-209ENST00000552448 ZBED6P86452 979 aa12.09□□□□□ -0.47
TUBA1C-209ENST00000552448 BIRC3Q13489 604 aa12.09□□□□□ -0.47
TUBA1C-209ENST00000552448 CIAPIN1Q6FI81 312 aa12.09□□□□□ -0.47
TUBA1C-209ENST00000552448 CYFIP2Q96F07 1278 aa12.09□□□□□ -0.47
TUBA1C-209ENST00000552448 CENPHQ9H3R5 247 aa12.09□□□□□ -0.47
TUBA1C-209ENST00000552448 GDF3Q9NR23 364 aa12.09□□□□□ -0.47
TUBA1C-209ENST00000552448 MAGEC2Q9UBF1 373 aaPredicted RBP12.09□□□□□ -0.47
TUBA1C-209ENST00000552448 TRIM10Q9UDY6 481 aa12.09□□□□□ -0.47
TUBA1C-209ENST00000552448 C5orf60A6NFR6 353 aa12.08□□□□□ -0.48
TUBA1C-209ENST00000552448 TXKP42681 527 aa12.08□□□□□ -0.48
TUBA1C-209ENST00000552448 RIPK1Q13546 671 aa12.08□□□□□ -0.48
TUBA1C-209ENST00000552448 CALCRLQ16602 461 aa12.08□□□□□ -0.48
TUBA1C-209ENST00000552448 UBE2SQ16763 222 aa12.08□□□□□ -0.48
TUBA1C-209ENST00000552448 RUFY4Q6ZNE9 571 aa12.08□□□□□ -0.48
TUBA1C-209ENST00000552448 ZSCAN29Q8IWY8 852 aaPredicted RBP12.08□□□□□ -0.48
TUBA1C-209ENST00000552448 GIMAP8Q8ND71 665 aaPredicted RBP12.08□□□□□ -0.48
TUBA1C-209ENST00000552448 DCAF4Q8WV16 495 aa12.08□□□□□ -0.48
TUBA1C-209ENST00000552448 CUL5Q93034 780 aa12.08□□□□□ -0.48
TUBA1C-209ENST00000552448 CCDC47Q96A33 483 aaKnown RBP12.08□□□□□ -0.48
TUBA1C-209ENST00000552448 PRMT6Q96LA8 375 aaPredicted RBP12.08□□□□□ -0.48
TUBA1C-209ENST00000552448 C7orf25Q9BPX7 421 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms