RNA–Protein interactions for RNA: ENST00000552428.6

R3HDM2-214, Transcript of R3H domain containing 2, humanhuman

TSL 5

Gene R3HDM2, Length 430 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-214ENST00000552428 TTC31Q49AM3 519 aaPredicted RBP6.96□□□□□ -1.3
R3HDM2-214ENST00000552428 MCTP2Q6DN12 878 aa6.96□□□□□ -1.3
R3HDM2-214ENST00000552428 OGFOD3Q6PK18 319 aa6.96□□□□□ -1.3
R3HDM2-214ENST00000552428 ANKRD20A12PQ8NF67 263 aa6.96□□□□□ -1.3
R3HDM2-214ENST00000552428 FAXDC2Q96IV6 333 aa6.96□□□□□ -1.3
R3HDM2-214ENST00000552428 NUP88Q99567 741 aaPredicted RBP6.96□□□□□ -1.3
R3HDM2-214ENST00000552428 BOCQ9BWV1 1114 aa6.96□□□□□ -1.3
R3HDM2-214ENST00000552428 C14orf119Q9NWQ9 140 aa6.96□□□□□ -1.3
R3HDM2-214ENST00000552428 FAM53CQ9NYF3 392 aa6.96□□□□□ -1.3
R3HDM2-214ENST00000552428 H2AFY2Q9P0M6 372 aaPredicted RBP6.96□□□□□ -1.3
R3HDM2-214ENST00000552428 CBLCQ9ULV8 474 aa6.96□□□□□ -1.3
R3HDM2-214ENST00000552428 POLA1P09884 1462 aaPredicted RBP6.96□□□□□ -1.3
R3HDM2-214ENST00000552428 RAD54L2Q9Y4B4 1467 aa6.96□□□□□ -1.3
R3HDM2-214ENST00000552428 ANKRD18BA2A2Z9 1011 aa6.95□□□□□ -1.3
R3HDM2-214ENST00000552428 TGM5O43548 720 aa6.95□□□□□ -1.3
R3HDM2-214ENST00000552428 LDHAP00338 332 aaKnown RBP6.95□□□□□ -1.3
R3HDM2-214ENST00000552428 IVLP07476 585 aa6.95□□□□□ -1.3
R3HDM2-214ENST00000552428 SYPP08247 313 aa6.95□□□□□ -1.3
R3HDM2-214ENST00000552428 TRIM27P14373 513 aa6.95□□□□□ -1.3
R3HDM2-214ENST00000552428 VCAM1P19320 739 aa6.95□□□□□ -1.3
R3HDM2-214ENST00000552428 MAP2K2P36507 400 aa6.95□□□□□ -1.3
R3HDM2-214ENST00000552428 TPM4P67936 248 aa6.95□□□□□ -1.3
R3HDM2-214ENST00000552428 PHC1P78364 1004 aa6.95□□□□□ -1.3
R3HDM2-214ENST00000552428 LSAMPQ13449 338 aa6.95□□□□□ -1.3
R3HDM2-214ENST00000552428 GTF2H3Q13889 308 aa6.95□□□□□ -1.3
R3HDM2-214ENST00000552428 PCBP2Q15366 365 aaKnown RBP eCLIP6.95□□□□□ -1.3
R3HDM2-214ENST00000552428 CDC37Q16543 378 aaPredicted RBP6.95□□□□□ -1.3
R3HDM2-214ENST00000552428 GPR158Q5T848 1215 aa6.95□□□□□ -1.3
R3HDM2-214ENST00000552428 BROXQ5VW32 411 aa6.95□□□□□ -1.3
R3HDM2-214ENST00000552428 MBLAC2Q68D91 279 aa6.95□□□□□ -1.3
R3HDM2-214ENST00000552428 CYP2R1Q6VVX0 501 aa6.95□□□□□ -1.3
R3HDM2-214ENST00000552428 BEND4Q6ZU67 534 aa6.95□□□□□ -1.3
R3HDM2-214ENST00000552428 PNMA8AQ86V59 439 aaPredicted RBP6.95□□□□□ -1.3
R3HDM2-214ENST00000552428 TSPYL5Q86VY4 417 aaPredicted RBP6.95□□□□□ -1.3
R3HDM2-214ENST00000552428 TMTC2Q8N394 836 aa6.95□□□□□ -1.3
R3HDM2-214ENST00000552428 IQUBQ8NA54 791 aa6.95□□□□□ -1.3
R3HDM2-214ENST00000552428 FAM184AQ8NB25 1140 aa6.95□□□□□ -1.3
R3HDM2-214ENST00000552428 GATA6Q92908 595 aa6.95□□□□□ -1.3
R3HDM2-214ENST00000552428 TBC1D32Q96NH3 1257 aa6.95□□□□□ -1.3
R3HDM2-214ENST00000552428 AIFM3Q96NN9 605 aa6.95□□□□□ -1.3
R3HDM2-214ENST00000552428 PTCHD1Q96NR3 888 aa6.95□□□□□ -1.3
R3HDM2-214ENST00000552428 FAM107BQ9H098 131 aa6.95□□□□□ -1.3
R3HDM2-214ENST00000552428 CDIP1Q9H305 208 aa6.95□□□□□ -1.3
R3HDM2-214ENST00000552428 KCNF1Q9H3M0 494 aa6.95□□□□□ -1.3
R3HDM2-214ENST00000552428 PANK3Q9H999 370 aa6.95□□□□□ -1.3
R3HDM2-214ENST00000552428 CATSPERZQ9NTU4 200 aa6.95□□□□□ -1.3
R3HDM2-214ENST00000552428 TCFL5Q9UL49 500 aa6.95□□□□□ -1.3
R3HDM2-214ENST00000552428 MRFAP1Q9Y605 127 aa6.95□□□□□ -1.3
R3HDM2-214ENST00000552428 USP19O94966 1318 aa6.95□□□□□ -1.3
R3HDM2-214ENST00000552428 LRPPRCP42704 1394 aaKnown RBP6.95□□□□□ -1.3
R3HDM2-214ENST00000552428 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.95□□□□□ -1.3
R3HDM2-214ENST00000552428 NLRP1Q9C000 1473 aa6.94□□□□□ -1.3
R3HDM2-214ENST00000552428 H7C1D1 291 aa6.94□□□□□ -1.3
R3HDM2-214ENST00000552428 ERC2O15083 957 aa6.94□□□□□ -1.3
R3HDM2-214ENST00000552428 DHX15O43143 795 aaKnown RBP6.94□□□□□ -1.3
R3HDM2-214ENST00000552428 U2AF2P26368 475 aaKnown RBP eCLIP6.94□□□□□ -1.3
R3HDM2-214ENST00000552428 MAGEA9P43362 315 aa6.94□□□□□ -1.3
R3HDM2-214ENST00000552428 SAFB2Q14151 953 aaKnown RBP eCLIP6.94□□□□□ -1.3
R3HDM2-214ENST00000552428 ADGRE1Q14246 886 aa6.94□□□□□ -1.3
R3HDM2-214ENST00000552428 GBX1Q14549 363 aa6.94□□□□□ -1.3
R3HDM2-214ENST00000552428 MBTPS1Q14703 1052 aa6.94□□□□□ -1.3
R3HDM2-214ENST00000552428 NOLC1Q14978 699 aaKnown RBP eCLIP6.94□□□□□ -1.3
R3HDM2-214ENST00000552428 CYP27C1Q4G0S4 372 aa6.94□□□□□ -1.3
R3HDM2-214ENST00000552428 HSP90B2PQ58FF3 399 aa6.94□□□□□ -1.3
R3HDM2-214ENST00000552428 ZAR1Q86SH2 424 aa6.94□□□□□ -1.3
R3HDM2-214ENST00000552428 GAS2L3Q86XJ1 694 aa6.94□□□□□ -1.3
R3HDM2-214ENST00000552428 HSCBQ8IWL3 235 aa6.94□□□□□ -1.3
R3HDM2-214ENST00000552428 CMTR2Q8IYT2 770 aaKnown RBP6.94□□□□□ -1.3
R3HDM2-214ENST00000552428 USHBP1Q8N6Y0 703 aa6.94□□□□□ -1.3
R3HDM2-214ENST00000552428 ZNF397Q8NF99 534 aaPredicted RBP6.94□□□□□ -1.3
R3HDM2-214ENST00000552428 USP33Q8TEY7 942 aa6.94□□□□□ -1.3
R3HDM2-214ENST00000552428 PPM1EQ8WY54 764 aa6.94□□□□□ -1.3
R3HDM2-214ENST00000552428 SNX21Q969T3 373 aa6.94□□□□□ -1.3
R3HDM2-214ENST00000552428 CLIP3Q96DZ5 547 aa6.94□□□□□ -1.3
R3HDM2-214ENST00000552428 MEGF10Q96KG7 1140 aa6.94□□□□□ -1.3
R3HDM2-214ENST00000552428 NOL10Q9BSC4 688 aaKnown RBP6.94□□□□□ -1.3
R3HDM2-214ENST00000552428 PPARGC1AQ9UBK2 798 aaKnown RBP6.94□□□□□ -1.3
R3HDM2-214ENST00000552428 STK17AQ9UEE5 414 aa6.94□□□□□ -1.3
R3HDM2-214ENST00000552428 ZNF652Q9Y2D9 606 aa6.94□□□□□ -1.3
R3HDM2-214ENST00000552428 SPO11Q9Y5K1 396 aa6.94□□□□□ -1.3
R3HDM2-214ENST00000552428 TIMM13Q9Y5L4 95 aaPredicted RBP6.94□□□□□ -1.3
R3HDM2-214ENST00000552428 DDX49Q9Y6V7 483 aaKnown RBP6.94□□□□□ -1.3
R3HDM2-214ENST00000552428 CGNL1Q0VF96 1302 aa6.94□□□□□ -1.3
R3HDM2-214ENST00000552428 CCDC7Q96M83 1385 aa6.94□□□□□ -1.3
R3HDM2-214ENST00000552428 SSU72P8A0A1W2PR75 194 aa6.93□□□□□ -1.3
R3HDM2-214ENST00000552428 SLC12A8A0AV02 714 aa6.93□□□□□ -1.3
R3HDM2-214ENST00000552428 TMCO5BA8MYB1 307 aa6.93□□□□□ -1.3
R3HDM2-214ENST00000552428 FAM155AB1AL88 458 aaPredicted RBP6.93□□□□□ -1.3
R3HDM2-214ENST00000552428 ZNF561-AS1K7EIQ3 104 aa6.93□□□□□ -1.3
R3HDM2-214ENST00000552428 MYO1CO00159 1063 aa6.93□□□□□ -1.3
R3HDM2-214ENST00000552428 ATP8B1O43520 1251 aa6.93□□□□□ -1.3
R3HDM2-214ENST00000552428 TBC1D8O95759 1140 aa6.93□□□□□ -1.3
R3HDM2-214ENST00000552428 LPOP22079 712 aaPredicted RBP6.93□□□□□ -1.3
R3HDM2-214ENST00000552428 CD151P48509 253 aa6.93□□□□□ -1.3
R3HDM2-214ENST00000552428 HNRNPH2P55795 449 aaKnown RBP6.93□□□□□ -1.3
R3HDM2-214ENST00000552428 RPL11P62913 178 aaKnown RBP6.93□□□□□ -1.3
R3HDM2-214ENST00000552428 TRAF1Q13077 416 aa6.93□□□□□ -1.3
R3HDM2-214ENST00000552428 RAB3GAP1Q15042 981 aa6.93□□□□□ -1.3
R3HDM2-214ENST00000552428 PGM2L1Q6PCE3 622 aa6.93□□□□□ -1.3
R3HDM2-214ENST00000552428 RNF111Q6ZNA4 994 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms