RNA–Protein interactions for RNA: ENST00000552188.1

CCDC65-204, Transcript of coiled-coil domain containing 65, humanhuman

TSL 3

Gene CCDC65, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-204ENST00000552188 TMEM260Q9NX78 707 aa6.72□□□□□ -1.33
CCDC65-204ENST00000552188 VPS54Q9P1Q0 977 aa6.72□□□□□ -1.33
CCDC65-204ENST00000552188 PCDH10Q9P2E7 1040 aa6.72□□□□□ -1.33
CCDC65-204ENST00000552188 ZNF215Q9UL58 517 aaPredicted RBP6.72□□□□□ -1.33
CCDC65-204ENST00000552188 CEP290O15078 2479 aa6.72□□□□□ -1.33
CCDC65-204ENST00000552188 EVPLQ92817 2033 aa6.71□□□□□ -1.33
CCDC65-204ENST00000552188 H3BRB1 525 aa6.71□□□□□ -1.34
CCDC65-204ENST00000552188 MARCH6O60337 910 aa6.71□□□□□ -1.34
CCDC65-204ENST00000552188 PFKFB2O60825 505 aa6.71□□□□□ -1.34
CCDC65-204ENST00000552188 RNF40O75150 1001 aa6.71□□□□□ -1.34
CCDC65-204ENST00000552188 LGALS2P05162 132 aa6.71□□□□□ -1.34
CCDC65-204ENST00000552188 GNAT1P11488 350 aa6.71□□□□□ -1.34
CCDC65-204ENST00000552188 CYP2C9P11712 490 aa6.71□□□□□ -1.34
CCDC65-204ENST00000552188 ACTN1P12814 892 aa6.71□□□□□ -1.34
CCDC65-204ENST00000552188 DNAJB2P25686 324 aa6.71□□□□□ -1.34
CCDC65-204ENST00000552188 TCF7P36402 384 aaPredicted RBP6.71□□□□□ -1.34
CCDC65-204ENST00000552188 SREBF1P36956 1147 aa6.71□□□□□ -1.34
CCDC65-204ENST00000552188 ARHGAP4P98171 946 aa6.71□□□□□ -1.34
CCDC65-204ENST00000552188 SCRN1Q12765 414 aa6.71□□□□□ -1.34
CCDC65-204ENST00000552188 PKN1Q16512 942 aa6.71□□□□□ -1.34
CCDC65-204ENST00000552188 AMHR2Q16671 573 aa6.71□□□□□ -1.34
CCDC65-204ENST00000552188 CEP55Q53EZ4 464 aa6.71□□□□□ -1.34
CCDC65-204ENST00000552188 SWT1Q5T5J6 900 aaKnown RBP6.71□□□□□ -1.34
CCDC65-204ENST00000552188 GALNT17Q6IS24 598 aa6.71□□□□□ -1.34
CCDC65-204ENST00000552188 PSRC1Q6PGN9 363 aaPredicted RBP6.71□□□□□ -1.34
CCDC65-204ENST00000552188 BLIDQ8IZY5 108 aa6.71□□□□□ -1.34
CCDC65-204ENST00000552188 NECAB1Q8N987 351 aa6.71□□□□□ -1.34
CCDC65-204ENST00000552188 SEPT1Q8WYJ6 367 aa6.71□□□□□ -1.34
CCDC65-204ENST00000552188 GLG1Q92896 1179 aa6.71□□□□□ -1.34
CCDC65-204ENST00000552188 RNPC3Q96LT9 517 aaKnown RBP6.71□□□□□ -1.34
CCDC65-204ENST00000552188 FTOQ9C0B1 505 aaKnown RBP eCLIP6.71□□□□□ -1.34
CCDC65-204ENST00000552188 TUT1Q9H6E5 874 aaKnown RBP6.71□□□□□ -1.34
CCDC65-204ENST00000552188 AZI2Q9H6S1 392 aa6.71□□□□□ -1.34
CCDC65-204ENST00000552188 TRMT13Q9NUP7 481 aaKnown RBP6.71□□□□□ -1.34
CCDC65-204ENST00000552188 ORC3Q9UBD5 711 aaPredicted RBP6.71□□□□□ -1.34
CCDC65-204ENST00000552188 HDAC6Q9UBN7 1215 aa6.71□□□□□ -1.34
CCDC65-204ENST00000552188 SLC9A2Q9UBY0 812 aa6.71□□□□□ -1.34
CCDC65-204ENST00000552188 TBX21Q9UL17 535 aa6.71□□□□□ -1.34
CCDC65-204ENST00000552188 TPCN1Q9ULQ1 816 aa6.71□□□□□ -1.34
CCDC65-204ENST00000552188 PCDHA4Q9UN74 947 aa6.71□□□□□ -1.34
CCDC65-204ENST00000552188 UBIAD1Q9Y5Z9 338 aa6.71□□□□□ -1.34
CCDC65-204ENST00000552188 GRIN2DO15399 1336 aa6.71□□□□□ -1.34
CCDC65-204ENST00000552188 STK36Q9NRP7 1315 aa6.71□□□□□ -1.34
CCDC65-204ENST00000552188 CCDC194A0A1B0GVG4 234 aa6.7□□□□□ -1.34
CCDC65-204ENST00000552188 C17orf102A2RUQ5 167 aa6.7□□□□□ -1.34
CCDC65-204ENST00000552188 ZBBXA8MT70 800 aa6.7□□□□□ -1.34
CCDC65-204ENST00000552188 DDX39AO00148 427 aaKnown RBP6.7□□□□□ -1.34
CCDC65-204ENST00000552188 ATP9AO75110 1047 aa6.7□□□□□ -1.34
CCDC65-204ENST00000552188 F2P00734 622 aa6.7□□□□□ -1.34
CCDC65-204ENST00000552188 FGBP02675 491 aa6.7□□□□□ -1.34
CCDC65-204ENST00000552188 ARP10275 920 aa6.7□□□□□ -1.34
CCDC65-204ENST00000552188 ACRP10323 421 aa6.7□□□□□ -1.34
CCDC65-204ENST00000552188 CSF2RAP15509 400 aa6.7□□□□□ -1.34
CCDC65-204ENST00000552188 KCNA2P16389 499 aa6.7□□□□□ -1.34
CCDC65-204ENST00000552188 ITGB5P18084 799 aa6.7□□□□□ -1.34
CCDC65-204ENST00000552188 ITGB8P26012 769 aa6.7□□□□□ -1.34
CCDC65-204ENST00000552188 CLK2P49760 499 aaKnown RBP6.7□□□□□ -1.34
CCDC65-204ENST00000552188 FXR1P51114 621 aaKnown RBP eCLIP6.7□□□□□ -1.34
CCDC65-204ENST00000552188 SETQ01105 290 aaPredicted RBP6.7□□□□□ -1.34
CCDC65-204ENST00000552188 SHHQ15465 462 aa6.7□□□□□ -1.34
CCDC65-204ENST00000552188 C8orf34Q49A92 452 aa6.7□□□□□ -1.34
CCDC65-204ENST00000552188 GDF6Q6KF10 455 aaPredicted RBP6.7□□□□□ -1.34
CCDC65-204ENST00000552188 NIPA1Q7RTP0 329 aa6.7□□□□□ -1.34
CCDC65-204ENST00000552188 DEFB128Q7Z7B8 93 aa6.7□□□□□ -1.34
CCDC65-204ENST00000552188 PARP9Q8IXQ6 854 aa6.7□□□□□ -1.34
CCDC65-204ENST00000552188 CAGE1Q8TC20 777 aa6.7□□□□□ -1.34
CCDC65-204ENST00000552188 RASGRP4Q8TDF6 673 aa6.7□□□□□ -1.34
CCDC65-204ENST00000552188 KAT2BQ92831 832 aa6.7□□□□□ -1.34
CCDC65-204ENST00000552188 ATP6V0A1Q93050 837 aa6.7□□□□□ -1.34
CCDC65-204ENST00000552188 SCLYQ96I15 445 aa6.7□□□□□ -1.34
CCDC65-204ENST00000552188 ZFRQ96KR1 1074 aaKnown RBP6.7□□□□□ -1.34
CCDC65-204ENST00000552188 GPR20Q99678 358 aa6.7□□□□□ -1.34
CCDC65-204ENST00000552188 ZNF577Q9BSK1 485 aa6.7□□□□□ -1.34
CCDC65-204ENST00000552188 NOC4LQ9BVI4 516 aaKnown RBP6.7□□□□□ -1.34
CCDC65-204ENST00000552188 PRO3102Q9H379 93 aa6.7□□□□□ -1.34
CCDC65-204ENST00000552188 SMARCAD1Q9H4L7 1026 aa6.7□□□□□ -1.34
CCDC65-204ENST00000552188 JPH1Q9HDC5 661 aaPredicted RBP6.7□□□□□ -1.34
CCDC65-204ENST00000552188 IL23AQ9NPF7 189 aa6.7□□□□□ -1.34
CCDC65-204ENST00000552188 KCNH7Q9NS40 1196 aa6.7□□□□□ -1.34
CCDC65-204ENST00000552188 ERAP1Q9NZ08 941 aa6.7□□□□□ -1.34
CCDC65-204ENST00000552188 GTF2IRD1Q9UHL9 959 aa6.7□□□□□ -1.34
CCDC65-204ENST00000552188 LIMCH1Q9UPQ0 1083 aa6.7□□□□□ -1.34
CCDC65-204ENST00000552188 NFASCO94856 1347 aa6.7□□□□□ -1.34
CCDC65-204ENST00000552188 MKI67P46013 3256 aaKnown RBP6.69□□□□□ -1.34
CCDC65-204ENST00000552188 IPO5O00410 1097 aaKnown RBP6.69□□□□□ -1.34
CCDC65-204ENST00000552188 MEIS1O00470 390 aa6.69□□□□□ -1.34
CCDC65-204ENST00000552188 BACH1O14867 736 aa6.69□□□□□ -1.34
CCDC65-204ENST00000552188 CYP3A4P08684 503 aa6.69□□□□□ -1.34
CCDC65-204ENST00000552188 SMIM10L2AP0DMW4 78 aa6.69□□□□□ -1.34
CCDC65-204ENST00000552188 SMIM10L2BP0DMW5 78 aa6.69□□□□□ -1.34
CCDC65-204ENST00000552188 PDIA4P13667 645 aaKnown RBP6.69□□□□□ -1.34
CCDC65-204ENST00000552188 MARK3P27448 753 aa6.69□□□□□ -1.34
CCDC65-204ENST00000552188 RFC2P35250 354 aa6.69□□□□□ -1.34
CCDC65-204ENST00000552188 KRT2P35908 639 aa6.69□□□□□ -1.34
CCDC65-204ENST00000552188 USP11P51784 963 aa6.69□□□□□ -1.34
CCDC65-204ENST00000552188 SEMA3FQ13275 785 aa6.69□□□□□ -1.34
CCDC65-204ENST00000552188 PTK7Q13308 1070 aa6.69□□□□□ -1.34
CCDC65-204ENST00000552188 GNL2Q13823 731 aaKnown RBP6.69□□□□□ -1.34
CCDC65-204ENST00000552188 NONOQ15233 471 aaKnown RBP eCLIP6.69□□□□□ -1.34
CCDC65-204ENST00000552188 SAFBQ15424 915 aaKnown RBP eCLIP6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms