RNA–Protein interactions for RNA: ENST00000551989.1

CCNT1-204, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 726 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-204ENST00000551989 USP17L3A6NCW0 530 aa5.91□□□□□ -1.46
CCNT1-204ENST00000551989 USP17L4A6NCW7 530 aa5.91□□□□□ -1.46
CCNT1-204ENST00000551989 MYMKA6NI61 221 aa5.91□□□□□ -1.46
CCNT1-204ENST00000551989 LRRC53A6NM62 1247 aa5.91□□□□□ -1.46
CCNT1-204ENST00000551989 PP2D1A8MPX8 630 aa5.91□□□□□ -1.46
CCNT1-204ENST00000551989 HMGB1P1B2RPK0 211 aaPredicted RBP5.91□□□□□ -1.46
CCNT1-204ENST00000551989 EBAG9O00559 213 aa5.91□□□□□ -1.46
CCNT1-204ENST00000551989 ENC1O14682 589 aa5.91□□□□□ -1.46
CCNT1-204ENST00000551989 CETN3O15182 167 aa5.91□□□□□ -1.46
CCNT1-204ENST00000551989 SLC16A3O15427 465 aaKnown RBP5.91□□□□□ -1.46
CCNT1-204ENST00000551989 CALUO43852 315 aaPredicted RBP5.91□□□□□ -1.46
CCNT1-204ENST00000551989 BBOX1O75936 387 aa5.91□□□□□ -1.46
CCNT1-204ENST00000551989 TTLL1O95922 423 aa5.91□□□□□ -1.46
CCNT1-204ENST00000551989 FOSP01100 380 aaPredicted RBP5.91□□□□□ -1.46
CCNT1-204ENST00000551989 HLA-DOAP06340 250 aa5.91□□□□□ -1.46
CCNT1-204ENST00000551989 CCDC172P0C7W6 258 aa5.91□□□□□ -1.46
CCNT1-204ENST00000551989 FCER1AP12319 257 aa5.91□□□□□ -1.46
CCNT1-204ENST00000551989 RFX1P22670 979 aa5.91□□□□□ -1.46
CCNT1-204ENST00000551989 CYP3A7P24462 503 aa5.91□□□□□ -1.46
CCNT1-204ENST00000551989 RPL13P26373 211 aaKnown RBP5.91□□□□□ -1.46
CCNT1-204ENST00000551989 EIF4A3P38919 411 aaKnown RBP5.91□□□□□ -1.46
CCNT1-204ENST00000551989 PRKCIP41743 596 aa5.91□□□□□ -1.46
CCNT1-204ENST00000551989 EPS15P42566 896 aa5.91□□□□□ -1.46
CCNT1-204ENST00000551989 CDR1P51861 262 aa5.91□□□□□ -1.46
CCNT1-204ENST00000551989 NPEPPSP55786 919 aa5.91□□□□□ -1.46
CCNT1-204ENST00000551989 GABPAQ06546 454 aa5.91□□□□□ -1.46
CCNT1-204ENST00000551989 COASYQ13057 564 aa5.91□□□□□ -1.46
CCNT1-204ENST00000551989 MTMR3Q13615 1198 aa5.91□□□□□ -1.46
CCNT1-204ENST00000551989 NAB2Q15742 525 aa5.91□□□□□ -1.46
CCNT1-204ENST00000551989 VPS72Q15906 364 aa5.91□□□□□ -1.46
CCNT1-204ENST00000551989 CRY2Q49AN0 593 aa5.91□□□□□ -1.46
CCNT1-204ENST00000551989 CCDC40Q4G0X9 1142 aa5.91□□□□□ -1.46
CCNT1-204ENST00000551989 TDRD12Q587J7 1177 aaKnown RBP5.91□□□□□ -1.46
CCNT1-204ENST00000551989 LRRC31Q6UY01 552 aa5.91□□□□□ -1.46
CCNT1-204ENST00000551989 TRIM67Q6ZTA4 783 aa5.91□□□□□ -1.46
CCNT1-204ENST00000551989 USP17L1Q7RTZ2 530 aa5.91□□□□□ -1.46
CCNT1-204ENST00000551989 ARMC9Q7Z3E5 817 aa5.91□□□□□ -1.46
CCNT1-204ENST00000551989 FRMD5Q7Z6J6 570 aa5.91□□□□□ -1.46
CCNT1-204ENST00000551989 CROCCP2Q86T23 111 aa5.91□□□□□ -1.46
CCNT1-204ENST00000551989 TRIM59Q8IWR1 403 aa5.91□□□□□ -1.46
CCNT1-204ENST00000551989 SYCE1Q8N0S2 351 aa5.91□□□□□ -1.46
CCNT1-204ENST00000551989 CNBD1Q8NA66 436 aa5.91□□□□□ -1.46
CCNT1-204ENST00000551989 DCAF4Q8WV16 495 aa5.91□□□□□ -1.46
CCNT1-204ENST00000551989 ATRIPQ8WXE1 791 aa5.91□□□□□ -1.46
CCNT1-204ENST00000551989 TAF4BQ92750 862 aa5.91□□□□□ -1.46
CCNT1-204ENST00000551989 LRRC45Q96CN5 670 aa5.91□□□□□ -1.46
CCNT1-204ENST00000551989 MTMR8Q96EF0 704 aa5.91□□□□□ -1.46
CCNT1-204ENST00000551989 CEP95Q96GE4 821 aa5.91□□□□□ -1.46
CCNT1-204ENST00000551989 RBM17Q96I25 401 aaKnown RBP5.91□□□□□ -1.46
CCNT1-204ENST00000551989 MBOAT7Q96N66 472 aa5.91□□□□□ -1.46
CCNT1-204ENST00000551989 PNMA5Q96PV4 448 aa5.91□□□□□ -1.46
CCNT1-204ENST00000551989 CAPS2Q9BXY5 557 aa5.91□□□□□ -1.46
CCNT1-204ENST00000551989 MMRN2Q9H8L6 949 aa5.91□□□□□ -1.46
CCNT1-204ENST00000551989 CD209Q9NNX6 404 aa5.91□□□□□ -1.46
CCNT1-204ENST00000551989 GDF3Q9NR23 364 aa5.91□□□□□ -1.46
CCNT1-204ENST00000551989 WDR70Q9NW82 654 aa5.91□□□□□ -1.46
CCNT1-204ENST00000551989 MTMR4Q9NYA4 1195 aa5.91□□□□□ -1.46
CCNT1-204ENST00000551989 TFCP2L1Q9NZI6 479 aa5.91□□□□□ -1.46
CCNT1-204ENST00000551989 ANKIB1Q9P2G1 1089 aa5.91□□□□□ -1.46
CCNT1-204ENST00000551989 GGA1Q9UJY5 639 aa5.91□□□□□ -1.46
CCNT1-204ENST00000551989 TRAF3IP3Q9Y228 551 aa5.91□□□□□ -1.46
CCNT1-204ENST00000551989 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.91□□□□□ -1.46
CCNT1-204ENST00000551989 CAPN6Q9Y6Q1 641 aa5.91□□□□□ -1.46
CCNT1-204ENST00000551989 GOLGA6L10A6NI86 522 aa5.9□□□□□ -1.46
CCNT1-204ENST00000551989 SMIM22K7EJ46 135 aa5.9□□□□□ -1.46
CCNT1-204ENST00000551989 ZNF263O14978 683 aa5.9□□□□□ -1.46
CCNT1-204ENST00000551989 EIF3HO15372 352 aaKnown RBP eCLIP5.9□□□□□ -1.46
CCNT1-204ENST00000551989 PPP1R12BO60237 982 aaPredicted RBP5.9□□□□□ -1.46
CCNT1-204ENST00000551989 FLOT1O75955 427 aa5.9□□□□□ -1.46
CCNT1-204ENST00000551989 ABL1P00519 1130 aa5.9□□□□□ -1.46
CCNT1-204ENST00000551989 VEGFAP15692 232 aaPredicted RBP5.9□□□□□ -1.46
CCNT1-204ENST00000551989 KLRK1P26718 216 aa5.9□□□□□ -1.46
CCNT1-204ENST00000551989 HOXA10P31260 410 aaPredicted RBP5.9□□□□□ -1.46
CCNT1-204ENST00000551989 GBP1P32455 592 aa5.9□□□□□ -1.46
CCNT1-204ENST00000551989 GGCXP38435 758 aa5.9□□□□□ -1.46
CCNT1-204ENST00000551989 TXKP42681 527 aa5.9□□□□□ -1.46
CCNT1-204ENST00000551989 RHBDL3P58872 404 aa5.9□□□□□ -1.46
CCNT1-204ENST00000551989 COPS2P61201 443 aa5.9□□□□□ -1.46
CCNT1-204ENST00000551989 C2orf54Q08AI8 447 aa5.9□□□□□ -1.46
CCNT1-204ENST00000551989 ZNF543Q08ER8 600 aa5.9□□□□□ -1.46
CCNT1-204ENST00000551989 DRP2Q13474 957 aa5.9□□□□□ -1.46
CCNT1-204ENST00000551989 ASIC2Q16515 512 aa5.9□□□□□ -1.46
CCNT1-204ENST00000551989 CDC37Q16543 378 aaPredicted RBP5.9□□□□□ -1.46
CCNT1-204ENST00000551989 BMT2Q1RMZ1 405 aa5.9□□□□□ -1.46
CCNT1-204ENST00000551989 SLC35G1Q2M3R5 365 aa5.9□□□□□ -1.46
CCNT1-204ENST00000551989 TTC31Q49AM3 519 aaPredicted RBP5.9□□□□□ -1.46
CCNT1-204ENST00000551989 FAM83BQ5T0W9 1011 aa5.9□□□□□ -1.46
CCNT1-204ENST00000551989 CFAP58Q5T655 872 aa5.9□□□□□ -1.46
CCNT1-204ENST00000551989 MEI1Q5TIA1 1274 aa5.9□□□□□ -1.46
CCNT1-204ENST00000551989 KLHDC7AQ5VTJ3 777 aa5.9□□□□□ -1.46
CCNT1-204ENST00000551989 HGSNATQ68CP4 663 aa5.9□□□□□ -1.46
CCNT1-204ENST00000551989 CC2D2BQ6DHV5 1058 aa5.9□□□□□ -1.46
CCNT1-204ENST00000551989 KDM7AQ6ZMT4 941 aa5.9□□□□□ -1.46
CCNT1-204ENST00000551989 BICDL1Q6ZP65 573 aa5.9□□□□□ -1.46
CCNT1-204ENST00000551989 STXBP4Q6ZWJ1 553 aa5.9□□□□□ -1.46
CCNT1-204ENST00000551989 SND1Q7KZF4 910 aaKnown RBP eCLIP5.9□□□□□ -1.46
CCNT1-204ENST00000551989 RRAGAQ7L523 313 aa5.9□□□□□ -1.46
CCNT1-204ENST00000551989 YTHDF3Q7Z739 585 aaKnown RBP5.9□□□□□ -1.46
CCNT1-204ENST00000551989 TAX1BP1Q86VP1 789 aa5.9□□□□□ -1.46
CCNT1-204ENST00000551989 MAPKAPK5Q8IW41 473 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms