RNA–Protein interactions for RNA: ENST00000551641.5

RAB3IP-215, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RAB3IP, Length 2,840 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-215ENST00000551641 CHADLQ6NUI6 762 aa8.96□□□□□ -0.97
RAB3IP-215ENST00000551641 ADGRF4Q8IZF3 695 aa8.96□□□□□ -0.97
RAB3IP-215ENST00000551641 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.96□□□□□ -0.97
RAB3IP-215ENST00000551641 HOOK2Q96ED9 719 aa8.96□□□□□ -0.97
RAB3IP-215ENST00000551641 MTMR8Q96EF0 704 aa8.96□□□□□ -0.97
RAB3IP-215ENST00000551641 EEF2KMTQ96G04 330 aa8.96□□□□□ -0.97
RAB3IP-215ENST00000551641 EDEM3Q9BZQ6 932 aa8.96□□□□□ -0.97
RAB3IP-215ENST00000551641 GBA2Q9HCG7 927 aaPredicted RBP8.96□□□□□ -0.97
RAB3IP-215ENST00000551641 GOPCQ9HD26 462 aa8.96□□□□□ -0.97
RAB3IP-215ENST00000551641 NYAP2Q9P242 653 aa8.96□□□□□ -0.97
RAB3IP-215ENST00000551641 SNCAIPQ9Y6H5 919 aa8.96□□□□□ -0.97
RAB3IP-215ENST00000551641 PITPNM2Q9BZ72 1349 aa8.96□□□□□ -0.98
RAB3IP-215ENST00000551641 PNMA6FA0A0J9YX94 578 aa8.96□□□□□ -0.98
RAB3IP-215ENST00000551641 PRLRP16471 622 aa8.96□□□□□ -0.98
RAB3IP-215ENST00000551641 ZNF543Q08ER8 600 aa8.96□□□□□ -0.98
RAB3IP-215ENST00000551641 ZCWPW2Q504Y3 356 aa8.96□□□□□ -0.98
RAB3IP-215ENST00000551641 C2orf69Q8N8R5 385 aa8.96□□□□□ -0.98
RAB3IP-215ENST00000551641 ZNF280CQ8ND82 737 aa8.96□□□□□ -0.98
RAB3IP-215ENST00000551641 OPTNQ96CV9 577 aa8.96□□□□□ -0.98
RAB3IP-215ENST00000551641 JMJD4Q9H9V9 463 aa8.96□□□□□ -0.98
RAB3IP-215ENST00000551641 ARHGAP20Q9P2F6 1191 aa8.96□□□□□ -0.98
RAB3IP-215ENST00000551641 CTDP1Q9Y5B0 961 aaPredicted RBP8.96□□□□□ -0.98
RAB3IP-215ENST00000551641 CENPFP49454 3210 aa8.96□□□□□ -0.98
RAB3IP-215ENST00000551641 EPHB6O15197 1021 aa8.95□□□□□ -0.98
RAB3IP-215ENST00000551641 AARSP49588 968 aaKnown RBP eCLIP8.95□□□□□ -0.98
RAB3IP-215ENST00000551641 KIF5AQ12840 1032 aa8.95□□□□□ -0.98
RAB3IP-215ENST00000551641 TRIM58Q8NG06 486 aa8.95□□□□□ -0.98
RAB3IP-215ENST00000551641 BAP1Q92560 729 aa8.95□□□□□ -0.98
RAB3IP-215ENST00000551641 SECISBP2LQ93073 1101 aaKnown RBP8.95□□□□□ -0.98
RAB3IP-215ENST00000551641 NUDT12Q9BQG2 462 aa8.95□□□□□ -0.98
RAB3IP-215ENST00000551641 RPAP3Q9H6T3 665 aaPredicted RBP8.95□□□□□ -0.98
RAB3IP-215ENST00000551641 SH2D4AQ9H788 454 aa8.95□□□□□ -0.98
RAB3IP-215ENST00000551641 MED4Q9NPJ6 270 aa8.95□□□□□ -0.98
RAB3IP-215ENST00000551641 PPP2R3BQ9Y5P8 575 aa8.95□□□□□ -0.98
RAB3IP-215ENST00000551641 GREB1LQ9C091 1923 aaPredicted RBP8.95□□□□□ -0.98
RAB3IP-215ENST00000551641 POTEMA6NI47 508 aa8.95□□□□□ -0.98
RAB3IP-215ENST00000551641 LRRIQ3A6PVS8 624 aaPredicted RBP8.95□□□□□ -0.98
RAB3IP-215ENST00000551641 PJA2O43164 708 aa8.95□□□□□ -0.98
RAB3IP-215ENST00000551641 SLC26A4O43511 780 aa8.95□□□□□ -0.98
RAB3IP-215ENST00000551641 PPP1R11O60927 126 aaPredicted RBP8.95□□□□□ -0.98
RAB3IP-215ENST00000551641 SRGAP2O75044 1071 aa8.95□□□□□ -0.98
RAB3IP-215ENST00000551641 HNRNPH2P55795 449 aaKnown RBP8.95□□□□□ -0.98
RAB3IP-215ENST00000551641 SPA17Q15506 151 aa8.95□□□□□ -0.98
RAB3IP-215ENST00000551641 ASTE1Q2TB18 679 aaPredicted RBP8.95□□□□□ -0.98
RAB3IP-215ENST00000551641 CST9Q5W186 159 aa8.95□□□□□ -0.98
RAB3IP-215ENST00000551641 KRT79Q5XKE5 535 aa8.95□□□□□ -0.98
RAB3IP-215ENST00000551641 KCNK18Q7Z418 384 aa8.95□□□□□ -0.98
RAB3IP-215ENST00000551641 ANKRD13AQ8IZ07 590 aa8.95□□□□□ -0.98
RAB3IP-215ENST00000551641 NEK11Q8NG66 645 aa8.95□□□□□ -0.98
RAB3IP-215ENST00000551641 FAM71BQ8TC56 605 aa8.95□□□□□ -0.98
RAB3IP-215ENST00000551641 SNX29Q8TEQ0 813 aa8.95□□□□□ -0.98
RAB3IP-215ENST00000551641 RUBCNQ92622 972 aa8.95□□□□□ -0.98
RAB3IP-215ENST00000551641 DDX12PQ92771 950 aa8.95□□□□□ -0.98
RAB3IP-215ENST00000551641 HAS1Q92839 578 aa8.95□□□□□ -0.98
RAB3IP-215ENST00000551641 DNAJC19Q96DA6 116 aa8.95□□□□□ -0.98
RAB3IP-215ENST00000551641 CDK5RAP3Q96JB5 506 aa8.95□□□□□ -0.98
RAB3IP-215ENST00000551641 ZFP91Q96JP5 570 aaPredicted RBP8.95□□□□□ -0.98
RAB3IP-215ENST00000551641 CCDC42Q96M95 316 aa8.95□□□□□ -0.98
RAB3IP-215ENST00000551641 VCPKMTQ9H867 229 aa8.95□□□□□ -0.98
RAB3IP-215ENST00000551641 EMILIN3Q9NT22 766 aa8.95□□□□□ -0.98
RAB3IP-215ENST00000551641 JRKLQ9Y4A0 524 aa8.95□□□□□ -0.98
RAB3IP-215ENST00000551641 DUSP10Q9Y6W6 482 aa8.95□□□□□ -0.98
RAB3IP-215ENST00000551641 PDE2AO00408 941 aaPredicted RBP8.95□□□□□ -0.98
RAB3IP-215ENST00000551641 PLEKP08567 350 aaPredicted RBP8.95□□□□□ -0.98
RAB3IP-215ENST00000551641 GCFC2P16383 781 aaKnown RBP8.95□□□□□ -0.98
RAB3IP-215ENST00000551641 CYP27A1Q02318 531 aa8.95□□□□□ -0.98
RAB3IP-215ENST00000551641 MAP9Q49MG5 647 aa8.95□□□□□ -0.98
RAB3IP-215ENST00000551641 TREML2Q5T2D2 321 aa8.95□□□□□ -0.98
RAB3IP-215ENST00000551641 WDR78Q5VTH9 848 aa8.95□□□□□ -0.98
RAB3IP-215ENST00000551641 WNK4Q96J92 1243 aa8.95□□□□□ -0.98
RAB3IP-215ENST00000551641 PCMTD1Q96MG8 357 aaPredicted RBP8.95□□□□□ -0.98
RAB3IP-215ENST00000551641 PAGR1Q9BTK6 254 aa8.95□□□□□ -0.98
RAB3IP-215ENST00000551641 TMOD4Q9NZQ9 345 aa8.95□□□□□ -0.98
RAB3IP-215ENST00000551641 SNX12Q9UMY4 172 aa8.95□□□□□ -0.98
RAB3IP-215ENST00000551641 TMX2Q9Y320 296 aa8.95□□□□□ -0.98
RAB3IP-215ENST00000551641 PCDHA13Q9Y5I0 950 aa8.95□□□□□ -0.98
RAB3IP-215ENST00000551641 MYH4Q9Y623 1939 aa8.94□□□□□ -0.98
RAB3IP-215ENST00000551641 SSU72P8A0A1W2PR75 194 aa8.94□□□□□ -0.98
RAB3IP-215ENST00000551641 USO1O60763 962 aaKnown RBP8.94□□□□□ -0.98
RAB3IP-215ENST00000551641 N4BP1O75113 896 aaKnown RBP8.94□□□□□ -0.98
RAB3IP-215ENST00000551641 IDEP14735 1019 aa8.94□□□□□ -0.98
RAB3IP-215ENST00000551641 VCAM1P19320 739 aa8.94□□□□□ -0.98
RAB3IP-215ENST00000551641 ZNF157P51786 506 aaPredicted RBP8.94□□□□□ -0.98
RAB3IP-215ENST00000551641 KIF11P52732 1056 aa8.94□□□□□ -0.98
RAB3IP-215ENST00000551641 ECM1Q16610 540 aa8.94□□□□□ -0.98
RAB3IP-215ENST00000551641 GPATCH4Q5T3I0 446 aaKnown RBP8.94□□□□□ -0.98
RAB3IP-215ENST00000551641 CREG2Q8IUH2 290 aa8.94□□□□□ -0.98
RAB3IP-215ENST00000551641 ACBD3Q9H3P7 528 aa8.94□□□□□ -0.98
RAB3IP-215ENST00000551641 AS3MTQ9HBK9 375 aa8.94□□□□□ -0.98
RAB3IP-215ENST00000551641 RBAK-RBAKDNI3L0D1 243 aa8.94□□□□□ -0.98
RAB3IP-215ENST00000551641 RPS6KA5O75582 802 aa8.94□□□□□ -0.98
RAB3IP-215ENST00000551641 STAT2P52630 851 aa8.94□□□□□ -0.98
RAB3IP-215ENST00000551641 GYS2P54840 703 aa8.94□□□□□ -0.98
RAB3IP-215ENST00000551641 MARSP56192 900 aaKnown RBP8.94□□□□□ -0.98
RAB3IP-215ENST00000551641 BACE1P56817 501 aa8.94□□□□□ -0.98
RAB3IP-215ENST00000551641 CDC37Q16543 378 aaPredicted RBP8.94□□□□□ -0.98
RAB3IP-215ENST00000551641 IQCEQ6IPM2 695 aa8.94□□□□□ -0.98
RAB3IP-215ENST00000551641 DYMQ7RTS9 669 aa8.94□□□□□ -0.98
RAB3IP-215ENST00000551641 ZC3H3Q8IXZ2 948 aaKnown RBP8.94□□□□□ -0.98
RAB3IP-215ENST00000551641 MMGT1Q8N4V1 131 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms