RNA–Protein interactions for RNA: ENST00000551497.1

SMARCD1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 4

Gene SMARCD1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-211ENST00000551497 WDR64B1ANS9 1081 aa17.09■□□□□ 0.33
SMARCD1-211ENST00000551497 H0YGN5 161 aa17.09■□□□□ 0.33
SMARCD1-211ENST00000551497 SMIM10L2AP0DMW4 78 aa17.09■□□□□ 0.33
SMARCD1-211ENST00000551497 SMIM10L2BP0DMW5 78 aa17.09■□□□□ 0.33
SMARCD1-211ENST00000551497 SPIRE1Q08AE8 756 aa17.09■□□□□ 0.33
SMARCD1-211ENST00000551497 PTGDRQ13258 359 aa17.09■□□□□ 0.33
SMARCD1-211ENST00000551497 PPP2R5CQ13362 524 aa17.09■□□□□ 0.33
SMARCD1-211ENST00000551497 PKP1Q13835 747 aa17.09■□□□□ 0.33
SMARCD1-211ENST00000551497 RILPL1Q5EBL4 403 aa17.09■□□□□ 0.33
SMARCD1-211ENST00000551497 PLPPR4Q7Z2D5 763 aa17.09■□□□□ 0.33
SMARCD1-211ENST00000551497 TRMT1LQ7Z2T5 733 aaKnown RBP17.09■□□□□ 0.33
SMARCD1-211ENST00000551497 SESTD1Q86VW0 696 aa17.09■□□□□ 0.33
SMARCD1-211ENST00000551497 TRIM43Q96BQ3 446 aaPredicted RBP17.09■□□□□ 0.33
SMARCD1-211ENST00000551497 PRDM5Q9NQX1 630 aaPredicted RBP17.09■□□□□ 0.33
SMARCD1-211ENST00000551497 ZNF302Q9NR11 478 aa17.09■□□□□ 0.33
SMARCD1-211ENST00000551497 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.09■□□□□ 0.33
SMARCD1-211ENST00000551497 SETD4Q9NVD3 440 aa17.09■□□□□ 0.33
SMARCD1-211ENST00000551497 GTF2IRD1Q9UHL9 959 aa17.09■□□□□ 0.33
SMARCD1-211ENST00000551497 ZNF215Q9UL58 517 aaPredicted RBP17.09■□□□□ 0.33
SMARCD1-211ENST00000551497 NR2E3Q9Y5X4 410 aa17.09■□□□□ 0.33
SMARCD1-211ENST00000551497 EMSYQ7Z589 1322 aa17.09■□□□□ 0.33
SMARCD1-211ENST00000551497 TRIP12Q14669 1992 aaPredicted RBP17.09■□□□□ 0.33
SMARCD1-211ENST00000551497 MROH7Q68CQ1 1323 aa17.08■□□□□ 0.32
SMARCD1-211ENST00000551497 CLTBP09497 229 aa17.08■□□□□ 0.32
SMARCD1-211ENST00000551497 OR52Z1P0C646 297 aa17.08■□□□□ 0.32
SMARCD1-211ENST00000551497 CYP2C9P11712 490 aa17.08■□□□□ 0.32
SMARCD1-211ENST00000551497 SFNP31947 248 aa17.08■□□□□ 0.32
SMARCD1-211ENST00000551497 JAK3P52333 1124 aa17.08■□□□□ 0.32
SMARCD1-211ENST00000551497 PTPN11Q06124 597 aaPredicted RBP17.08■□□□□ 0.32
SMARCD1-211ENST00000551497 PLCB4Q15147 1175 aa17.08■□□□□ 0.32
SMARCD1-211ENST00000551497 UGCGQ16739 394 aa17.08■□□□□ 0.32
SMARCD1-211ENST00000551497 FAM160B1Q5W0V3 765 aa17.08■□□□□ 0.32
SMARCD1-211ENST00000551497 NCAPH2Q6IBW4 605 aa17.08■□□□□ 0.32
SMARCD1-211ENST00000551497 PDXDC2PQ6P474 469 aa17.08■□□□□ 0.32
SMARCD1-211ENST00000551497 BRAPQ7Z569 592 aa17.08■□□□□ 0.32
SMARCD1-211ENST00000551497 AFAP1L1Q8TED9 768 aa17.08■□□□□ 0.32
SMARCD1-211ENST00000551497 CTAGE1Q96RT6 745 aa17.08■□□□□ 0.32
SMARCD1-211ENST00000551497 SEZ6LQ9BYH1 1024 aa17.08■□□□□ 0.32
SMARCD1-211ENST00000551497 PDLIM7Q9NR12 457 aa17.08■□□□□ 0.32
SMARCD1-211ENST00000551497 TMEM39AQ9NV64 488 aa17.08■□□□□ 0.32
SMARCD1-211ENST00000551497 MAFBQ9Y5Q3 323 aaPredicted RBP17.08■□□□□ 0.32
SMARCD1-211ENST00000551497 TLR3O15455 904 aaKnown RBP17.07■□□□□ 0.32
SMARCD1-211ENST00000551497 ZNF862O60290 1169 aa17.07■□□□□ 0.32
SMARCD1-211ENST00000551497 ITGB8P26012 769 aa17.07■□□□□ 0.32
SMARCD1-211ENST00000551497 TECP42680 631 aa17.07■□□□□ 0.32
SMARCD1-211ENST00000551497 ORC2Q13416 577 aaPredicted RBP17.07■□□□□ 0.32
SMARCD1-211ENST00000551497 IL17AQ16552 155 aa17.07■□□□□ 0.32
SMARCD1-211ENST00000551497 PTGISQ16647 500 aa17.07■□□□□ 0.32
SMARCD1-211ENST00000551497 MYH9P35579 1960 aaKnown RBP17.06■□□□□ 0.32
SMARCD1-211ENST00000551497 WDR81Q562E7 1941 aa17.06■□□□□ 0.32
SMARCD1-211ENST00000551497 POTEB3A0JP26 581 aa17.06■□□□□ 0.32
SMARCD1-211ENST00000551497 RBAK-RBAKDNI3L0D1 243 aa17.06■□□□□ 0.32
SMARCD1-211ENST00000551497 KIAA0355O15063 1070 aa17.06■□□□□ 0.32
SMARCD1-211ENST00000551497 INSRRP14616 1297 aa17.06■□□□□ 0.32
SMARCD1-211ENST00000551497 EPHA7Q15375 998 aa17.06■□□□□ 0.32
SMARCD1-211ENST00000551497 POTEBQ6S5H4 581 aa17.06■□□□□ 0.32
SMARCD1-211ENST00000551497 CKAP2LQ8IYA6 745 aa17.06■□□□□ 0.32
SMARCD1-211ENST00000551497 BANK1Q8NDB2 785 aa17.06■□□□□ 0.32
SMARCD1-211ENST00000551497 RDM1Q8NG50 284 aa17.06■□□□□ 0.32
SMARCD1-211ENST00000551497 TRAPPC12Q8WVT3 735 aa17.06■□□□□ 0.32
SMARCD1-211ENST00000551497 ZBTB10Q96DT7 871 aa17.06■□□□□ 0.32
SMARCD1-211ENST00000551497 FTOQ9C0B1 505 aaKnown RBP eCLIP17.06■□□□□ 0.32
SMARCD1-211ENST00000551497 RGL1Q9NZL6 768 aa17.06■□□□□ 0.32
SMARCD1-211ENST00000551497 TBX21Q9UL17 535 aa17.06■□□□□ 0.32
SMARCD1-211ENST00000551497 CLIC4Q9Y696 253 aa17.06■□□□□ 0.32
SMARCD1-211ENST00000551497 KAT6AQ92794 2004 aa17.06■□□□□ 0.32
SMARCD1-211ENST00000551497 C17orf102A2RUQ5 167 aa17.05■□□□□ 0.32
SMARCD1-211ENST00000551497 TREHO43280 583 aa17.05■□□□□ 0.32
SMARCD1-211ENST00000551497 STBD1O95210 358 aa17.05■□□□□ 0.32
SMARCD1-211ENST00000551497 ZSCAN22P10073 491 aaPredicted RBP17.05■□□□□ 0.32
SMARCD1-211ENST00000551497 HOXC8P31273 242 aa17.05■□□□□ 0.32
SMARCD1-211ENST00000551497 IGBP1P78318 339 aa17.05■□□□□ 0.32
SMARCD1-211ENST00000551497 ADAM17P78536 824 aa17.05■□□□□ 0.32
SMARCD1-211ENST00000551497 PPFIA1Q13136 1202 aa17.05■□□□□ 0.32
SMARCD1-211ENST00000551497 ATP8B4Q8TF62 1192 aa17.05■□□□□ 0.32
SMARCD1-211ENST00000551497 LMBR1Q8WVP7 490 aa17.05■□□□□ 0.32
SMARCD1-211ENST00000551497 ATP6V0A1Q93050 837 aa17.05■□□□□ 0.32
SMARCD1-211ENST00000551497 ZSCAN16Q9H4T2 348 aaPredicted RBP17.05■□□□□ 0.32
SMARCD1-211ENST00000551497 TRPC6Q9Y210 931 aa17.05■□□□□ 0.32
SMARCD1-211ENST00000551497 ZDHHC9Q9Y397 364 aa17.05■□□□□ 0.32
SMARCD1-211ENST00000551497 UMODL1Q5DID0 1318 aa17.04■□□□□ 0.32
SMARCD1-211ENST00000551497 POTEMA6NI47 508 aa17.04■□□□□ 0.32
SMARCD1-211ENST00000551497 CYP2C18P33260 490 aa17.04■□□□□ 0.32
SMARCD1-211ENST00000551497 SLC26A2P50443 739 aa17.04■□□□□ 0.32
SMARCD1-211ENST00000551497 ATP2C1P98194 919 aaPredicted RBP17.04■□□□□ 0.32
SMARCD1-211ENST00000551497 CTTNQ14247 550 aaKnown RBP17.04■□□□□ 0.32
SMARCD1-211ENST00000551497 SF3A1Q15459 793 aaKnown RBP17.04■□□□□ 0.32
SMARCD1-211ENST00000551497 GRIK4Q16099 956 aa17.04■□□□□ 0.32
SMARCD1-211ENST00000551497 MARCH8Q5T0T0 291 aa17.04■□□□□ 0.32
SMARCD1-211ENST00000551497 DHX38Q92620 1227 aaKnown RBP17.04■□□□□ 0.32
SMARCD1-211ENST00000551497 WNT8BQ93098 351 aa17.04■□□□□ 0.32
SMARCD1-211ENST00000551497 DYDC2Q96IM9 177 aa17.04■□□□□ 0.32
SMARCD1-211ENST00000551497 EIF2AK1Q9BQI3 630 aaKnown RBP17.04■□□□□ 0.32
SMARCD1-211ENST00000551497 PPP1R12CQ9BZL4 782 aa17.04■□□□□ 0.32
SMARCD1-211ENST00000551497 WRAP73Q9P2S5 460 aaPredicted RBP17.04■□□□□ 0.32
SMARCD1-211ENST00000551497 TFIP11Q9UBB9 837 aaKnown RBP17.04■□□□□ 0.32
SMARCD1-211ENST00000551497 NOD1Q9Y239 953 aa17.04■□□□□ 0.32
SMARCD1-211ENST00000551497 NRCAMQ92823 1304 aa17.03■□□□□ 0.32
SMARCD1-211ENST00000551497 IGSF9BQ9UPX0 1349 aa17.03■□□□□ 0.32
SMARCD1-211ENST00000551497 A0A087WWV3 80 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms