RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 AGO4Q9HCK5 861 aaKnown RBP12.75□□□□□ -0.37
RAB5C-208ENST00000551338 RNF146Q9NTX7 359 aa12.75□□□□□ -0.37
RAB5C-208ENST00000551338 ADAMTS5Q9UNA0 930 aa12.75□□□□□ -0.37
RAB5C-208ENST00000551338 SIK3Q9Y2K2 1263 aa12.75□□□□□ -0.37
RAB5C-208ENST00000551338 CTDP1Q9Y5B0 961 aaPredicted RBP12.75□□□□□ -0.37
RAB5C-208ENST00000551338 COL4A3BPQ9Y5P4 624 aa12.75□□□□□ -0.37
RAB5C-208ENST00000551338 ZHX2Q9Y6X8 837 aa12.75□□□□□ -0.37
RAB5C-208ENST00000551338 A0A0U1RQJ8 604 aa12.74□□□□□ -0.37
RAB5C-208ENST00000551338 DDX39AO00148 427 aaKnown RBP12.74□□□□□ -0.37
RAB5C-208ENST00000551338 TRAF5O00463 557 aa12.74□□□□□ -0.37
RAB5C-208ENST00000551338 USP2O75604 605 aaPredicted RBP12.74□□□□□ -0.37
RAB5C-208ENST00000551338 DDNO94850 711 aaPredicted RBP12.74□□□□□ -0.37
RAB5C-208ENST00000551338 MYBP10242 640 aa12.74□□□□□ -0.37
RAB5C-208ENST00000551338 GAP43P17677 238 aa12.74□□□□□ -0.37
RAB5C-208ENST00000551338 EIF2AK2P19525 551 aaKnown RBP12.74□□□□□ -0.37
RAB5C-208ENST00000551338 HOXD13P35453 343 aa12.74□□□□□ -0.37
RAB5C-208ENST00000551338 MARSP56192 900 aaKnown RBP12.74□□□□□ -0.37
RAB5C-208ENST00000551338 ITGB3BPQ13352 177 aaPredicted RBP12.74□□□□□ -0.37
RAB5C-208ENST00000551338 BMT2Q1RMZ1 405 aa12.74□□□□□ -0.37
RAB5C-208ENST00000551338 EDRF1Q3B7T1 1238 aa12.74□□□□□ -0.37
RAB5C-208ENST00000551338 WDR59Q6PJI9 974 aa12.74□□□□□ -0.37
RAB5C-208ENST00000551338 CYP26C1Q6V0L0 522 aa12.74□□□□□ -0.37
RAB5C-208ENST00000551338 PPP4R3CPQ6ZMV5 832 aa12.74□□□□□ -0.37
RAB5C-208ENST00000551338 RNF207Q6ZRF8 634 aa12.74□□□□□ -0.37
RAB5C-208ENST00000551338 RETREG2Q8NC44 543 aa12.74□□□□□ -0.37
RAB5C-208ENST00000551338 ACRBPQ8NEB7 543 aa12.74□□□□□ -0.37
RAB5C-208ENST00000551338 ATRIPQ8WXE1 791 aa12.74□□□□□ -0.37
RAB5C-208ENST00000551338 CHP1Q99653 195 aa12.74□□□□□ -0.37
RAB5C-208ENST00000551338 PDCD2LQ9BRP1 358 aa12.74□□□□□ -0.37
RAB5C-208ENST00000551338 NDST4Q9H3R1 872 aa12.74□□□□□ -0.37
RAB5C-208ENST00000551338 L2HGDHQ9H9P8 463 aa12.74□□□□□ -0.37
RAB5C-208ENST00000551338 PXMP2Q9NR77 195 aa12.74□□□□□ -0.37
RAB5C-208ENST00000551338 KCNH7Q9NS40 1196 aa12.74□□□□□ -0.37
RAB5C-208ENST00000551338 PKD2L1Q9P0L9 805 aa12.74□□□□□ -0.37
RAB5C-208ENST00000551338 DNAI1Q9UI46 699 aa12.74□□□□□ -0.37
RAB5C-208ENST00000551338 ZNF214Q9UL59 606 aaPredicted RBP12.74□□□□□ -0.37
RAB5C-208ENST00000551338 LUC7L2Q9Y383 392 aaKnown RBP12.74□□□□□ -0.37
RAB5C-208ENST00000551338 RIPK3Q9Y572 518 aa12.74□□□□□ -0.37
RAB5C-208ENST00000551338 SNCAIPQ9Y6H5 919 aa12.74□□□□□ -0.37
RAB5C-208ENST00000551338 ZMYM2Q9UBW7 1377 aa12.73□□□□□ -0.37
RAB5C-208ENST00000551338 A0A1W2PQJ5 194 aa12.73□□□□□ -0.37
RAB5C-208ENST00000551338 ZBTB39O15060 712 aa12.73□□□□□ -0.37
RAB5C-208ENST00000551338 TBCAO75347 108 aaKnown RBP12.73□□□□□ -0.37
RAB5C-208ENST00000551338 PRPF6O94906 941 aaKnown RBP12.73□□□□□ -0.37
RAB5C-208ENST00000551338 OAZ1P54368 228 aa12.73□□□□□ -0.37
RAB5C-208ENST00000551338 MEA1Q16626 185 aa12.73□□□□□ -0.37
RAB5C-208ENST00000551338 CCDC40Q4G0X9 1142 aa12.73□□□□□ -0.37
RAB5C-208ENST00000551338 SH3D19Q5HYK7 790 aa12.73□□□□□ -0.37
RAB5C-208ENST00000551338 NSMFQ6X4W1 530 aa12.73□□□□□ -0.37
RAB5C-208ENST00000551338 CATSPERGQ6ZRH7 1159 aa12.73□□□□□ -0.37
RAB5C-208ENST00000551338 MIER3Q7Z3K6 550 aa12.73□□□□□ -0.37
RAB5C-208ENST00000551338 TRIM59Q8IWR1 403 aa12.73□□□□□ -0.37
RAB5C-208ENST00000551338 BANK1Q8NDB2 785 aa12.73□□□□□ -0.37
RAB5C-208ENST00000551338 OR8K1Q8NGG5 319 aa12.73□□□□□ -0.37
RAB5C-208ENST00000551338 PURBQ96QR8 312 aaKnown RBP12.73□□□□□ -0.37
RAB5C-208ENST00000551338 NACC1Q96RE7 527 aa12.73□□□□□ -0.37
RAB5C-208ENST00000551338 LXNQ9BS40 222 aa12.73□□□□□ -0.37
RAB5C-208ENST00000551338 OLFML3Q9NRN5 406 aa12.73□□□□□ -0.37
RAB5C-208ENST00000551338 TRAF3IP3Q9Y228 551 aa12.73□□□□□ -0.37
RAB5C-208ENST00000551338 AFG3L2Q9Y4W6 797 aa12.73□□□□□ -0.37
RAB5C-208ENST00000551338 SIP14410 1827 aa12.73□□□□□ -0.37
RAB5C-208ENST00000551338 SCN4AP35499 1836 aa12.73□□□□□ -0.37
RAB5C-208ENST00000551338 ZNFX1Q9P2E3 1918 aaKnown RBP12.72□□□□□ -0.37
RAB5C-208ENST00000551338 ASTN1O14525 1302 aa12.72□□□□□ -0.37
RAB5C-208ENST00000551338 MYPNQ86TC9 1320 aa12.72□□□□□ -0.37
RAB5C-208ENST00000551338 SPDYE16A6NNV3 312 aaPredicted RBP12.72□□□□□ -0.37
RAB5C-208ENST00000551338 EPHB6O15197 1021 aa12.72□□□□□ -0.37
RAB5C-208ENST00000551338 FAM13AO94988 1023 aa12.72□□□□□ -0.37
RAB5C-208ENST00000551338 MYCLP12524 364 aaPredicted RBP12.72□□□□□ -0.37
RAB5C-208ENST00000551338 ZBED6P86452 979 aa12.72□□□□□ -0.37
RAB5C-208ENST00000551338 KCNMA1Q12791 1236 aa12.72□□□□□ -0.37
RAB5C-208ENST00000551338 BAATQ14032 418 aaPredicted RBP12.72□□□□□ -0.37
RAB5C-208ENST00000551338 KNOP1Q1ED39 458 aaKnown RBP12.72□□□□□ -0.37
RAB5C-208ENST00000551338 SUPT20HL1Q3ZLR7 823 aa12.72□□□□□ -0.37
RAB5C-208ENST00000551338 SNRNP48Q6IEG0 339 aaKnown RBP12.72□□□□□ -0.37
RAB5C-208ENST00000551338 DLK2Q6UY11 383 aa12.72□□□□□ -0.37
RAB5C-208ENST00000551338 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.72□□□□□ -0.37
RAB5C-208ENST00000551338 ZNF710Q8N1W2 664 aa12.72□□□□□ -0.37
RAB5C-208ENST00000551338 IQCDQ96DY2 449 aa12.72□□□□□ -0.37
RAB5C-208ENST00000551338 PCMTD1Q96MG8 357 aaPredicted RBP12.72□□□□□ -0.37
RAB5C-208ENST00000551338 FIZ1Q96SL8 496 aa12.72□□□□□ -0.37
RAB5C-208ENST00000551338 POLD4Q9HCU8 107 aa12.72□□□□□ -0.37
RAB5C-208ENST00000551338 ADARB2Q9NS39 739 aaKnown RBP12.72□□□□□ -0.37
RAB5C-208ENST00000551338 AGPAT5Q9NUQ2 364 aa12.72□□□□□ -0.37
RAB5C-208ENST00000551338 REXO2Q9Y3B8 237 aaKnown RBP12.72□□□□□ -0.37
RAB5C-208ENST00000551338 UBE4BO95155 1302 aa12.71□□□□□ -0.37
RAB5C-208ENST00000551338 ADM5C9JUS6 153 aa12.71□□□□□ -0.37
RAB5C-208ENST00000551338 PDXKO00764 312 aa12.71□□□□□ -0.37
RAB5C-208ENST00000551338 ATP2A1O14983 1001 aa12.71□□□□□ -0.37
RAB5C-208ENST00000551338 EIF3DO15371 548 aaKnown RBP eCLIP12.71□□□□□ -0.37
RAB5C-208ENST00000551338 GNA14O95837 355 aa12.71□□□□□ -0.37
RAB5C-208ENST00000551338 TRIM21P19474 475 aaKnown RBP12.71□□□□□ -0.37
RAB5C-208ENST00000551338 ARHGAP25P42331 645 aa12.71□□□□□ -0.37
RAB5C-208ENST00000551338 ZNF131P52739 623 aa12.71□□□□□ -0.37
RAB5C-208ENST00000551338 MAPK7Q13164 816 aa12.71□□□□□ -0.37
RAB5C-208ENST00000551338 MTMR1Q13613 665 aa12.71□□□□□ -0.37
RAB5C-208ENST00000551338 PRKG1Q13976 671 aa12.71□□□□□ -0.37
RAB5C-208ENST00000551338 COG2Q14746 738 aa12.71□□□□□ -0.37
RAB5C-208ENST00000551338 TMEM132BQ14DG7 1078 aa12.71□□□□□ -0.37
RAB5C-208ENST00000551338 WDR24Q96S15 920 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms