RNA–Protein interactions for RNA: ENST00000550914.6

PTCH1-221, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-221ENST00000550914 LMAN2LQ9H0V9 348 aa14.74□□□□□ -0.05
PTCH1-221ENST00000550914 NSUN3Q9H649 340 aaKnown RBP14.74□□□□□ -0.05
PTCH1-221ENST00000550914 RC3H2Q9HBD1 1191 aaKnown RBP14.74□□□□□ -0.05
PTCH1-221ENST00000550914 CD320Q9NPF0 282 aa14.74□□□□□ -0.05
PTCH1-221ENST00000550914 JADE2Q9NQC1 790 aa14.74□□□□□ -0.05
PTCH1-221ENST00000550914 FAM50BQ9Y247 325 aa14.74□□□□□ -0.05
PTCH1-221ENST00000550914 SLC12A7Q9Y666 1083 aa14.74□□□□□ -0.05
PTCH1-221ENST00000550914 SQORQ9Y6N5 450 aa14.74□□□□□ -0.05
PTCH1-221ENST00000550914 ADGRA3Q8IWK6 1321 aa14.73□□□□□ -0.05
PTCH1-221ENST00000550914 RBAK-RBAKDNI3L0D1 243 aa14.73□□□□□ -0.05
PTCH1-221ENST00000550914 SLC27A2O14975 620 aa14.73□□□□□ -0.05
PTCH1-221ENST00000550914 GHRP10912 638 aa14.73□□□□□ -0.05
PTCH1-221ENST00000550914 TCEAL5Q5H9L2 206 aa14.73□□□□□ -0.05
PTCH1-221ENST00000550914 FBXO47Q5MNV8 452 aa14.73□□□□□ -0.05
PTCH1-221ENST00000550914 MARCH8Q5T0T0 291 aa14.73□□□□□ -0.05
PTCH1-221ENST00000550914 TSHZ1Q6ZSZ6 1077 aa14.73□□□□□ -0.05
PTCH1-221ENST00000550914 FAM43BQ6ZT52 329 aaPredicted RBP14.73□□□□□ -0.05
PTCH1-221ENST00000550914 TMTC3Q6ZXV5 915 aa14.73□□□□□ -0.05
PTCH1-221ENST00000550914 JPH1Q9HDC5 661 aaPredicted RBP14.73□□□□□ -0.05
PTCH1-221ENST00000550914 C11orf16Q9NQ32 467 aa14.73□□□□□ -0.05
PTCH1-221ENST00000550914 PCDHA6Q9UN73 950 aa14.73□□□□□ -0.05
PTCH1-221ENST00000550914 PCDHA8Q9Y5H6 950 aa14.73□□□□□ -0.05
PTCH1-221ENST00000550914 ENPP3O14638 875 aa14.72□□□□□ -0.05
PTCH1-221ENST00000550914 LINC00271P0C7V0 271 aa14.72□□□□□ -0.05
PTCH1-221ENST00000550914 IL9P15248 144 aa14.72□□□□□ -0.05
PTCH1-221ENST00000550914 CTNNB1P35222 781 aa14.72□□□□□ -0.05
PTCH1-221ENST00000550914 BMPR1AP36894 532 aa14.72□□□□□ -0.05
PTCH1-221ENST00000550914 MRPS6P82932 125 aaKnown RBP14.72□□□□□ -0.05
PTCH1-221ENST00000550914 NECTIN1Q15223 517 aa14.72□□□□□ -0.05
PTCH1-221ENST00000550914 CREB3L3Q68CJ9 461 aa14.72□□□□□ -0.05
PTCH1-221ENST00000550914 CMTR1Q8N1G2 835 aaKnown RBP14.72□□□□□ -0.05
PTCH1-221ENST00000550914 ZNF689Q96CS4 500 aaPredicted RBP14.72□□□□□ -0.05
PTCH1-221ENST00000550914 ESYT1Q9BSJ8 1104 aa14.72□□□□□ -0.05
PTCH1-221ENST00000550914 PLVAPQ9BX97 442 aa14.72□□□□□ -0.05
PTCH1-221ENST00000550914 PRKAG3Q9UGI9 489 aa14.72□□□□□ -0.05
PTCH1-221ENST00000550914 CDY2AQ9Y6F7 541 aa14.72□□□□□ -0.05
PTCH1-221ENST00000550914 NFASCO94856 1347 aa14.71□□□□□ -0.05
PTCH1-221ENST00000550914 ALADP13716 330 aa14.71□□□□□ -0.05
PTCH1-221ENST00000550914 RXRAP19793 462 aa14.71□□□□□ -0.05
PTCH1-221ENST00000550914 MARK3P27448 753 aa14.71□□□□□ -0.05
PTCH1-221ENST00000550914 UBE2SQ16763 222 aa14.71□□□□□ -0.05
PTCH1-221ENST00000550914 IER5Q5VY09 327 aa14.71□□□□□ -0.05
PTCH1-221ENST00000550914 PPP1R18Q6NYC8 613 aa14.71□□□□□ -0.05
PTCH1-221ENST00000550914 PLPPR4Q7Z2D5 763 aa14.71□□□□□ -0.05
PTCH1-221ENST00000550914 DNAJB3Q8WWF6 145 aa14.71□□□□□ -0.05
PTCH1-221ENST00000550914 MXRA8Q9BRK3 442 aa14.71□□□□□ -0.05
PTCH1-221ENST00000550914 FTHL17Q9BXU8 183 aa14.71□□□□□ -0.05
PTCH1-221ENST00000550914 AZI2Q9H6S1 392 aa14.71□□□□□ -0.05
PTCH1-221ENST00000550914 KCNH7Q9NS40 1196 aa14.71□□□□□ -0.05
PTCH1-221ENST00000550914 SLC9A2Q9UBY0 812 aa14.71□□□□□ -0.05
PTCH1-221ENST00000550914 EVPLQ92817 2033 aa14.71□□□□□ -0.05
PTCH1-221ENST00000550914 KIAA1671Q9BY89 1806 aa14.71□□□□□ -0.06
PTCH1-221ENST00000550914 MYH9P35579 1960 aaKnown RBP14.71□□□□□ -0.06
PTCH1-221ENST00000550914 hCG_1642624A0A1W2PR95 340 aa14.7□□□□□ -0.06
PTCH1-221ENST00000550914 H3BQ06 376 aaPredicted RBP14.7□□□□□ -0.06
PTCH1-221ENST00000550914 hCG_1984214I3L0E3 225 aa14.7□□□□□ -0.06
PTCH1-221ENST00000550914 DGKIO75912 1065 aa14.7□□□□□ -0.06
PTCH1-221ENST00000550914 FOSP01100 380 aaPredicted RBP14.7□□□□□ -0.06
PTCH1-221ENST00000550914 INSRRP14616 1297 aa14.7□□□□□ -0.06
PTCH1-221ENST00000550914 SSTR3P32745 418 aaPredicted RBP14.7□□□□□ -0.06
PTCH1-221ENST00000550914 CTC1Q2NKJ3 1217 aa14.7□□□□□ -0.06
PTCH1-221ENST00000550914 SYNE3Q6ZMZ3 975 aa14.7□□□□□ -0.06
PTCH1-221ENST00000550914 HEATR3Q7Z4Q2 680 aa14.7□□□□□ -0.06
PTCH1-221ENST00000550914 ZNF713Q8N859 430 aaPredicted RBP14.7□□□□□ -0.06
PTCH1-221ENST00000550914 PCYT2Q99447 389 aa14.7□□□□□ -0.06
PTCH1-221ENST00000550914 SDF4Q9BRK5 362 aa14.7□□□□□ -0.06
PTCH1-221ENST00000550914 GLT8D2Q9H1C3 349 aa14.7□□□□□ -0.06
PTCH1-221ENST00000550914 RBM28Q9NW13 759 aaKnown RBP14.7□□□□□ -0.06
PTCH1-221ENST00000550914 PCDHA2Q9Y5H9 948 aa14.7□□□□□ -0.06
PTCH1-221ENST00000550914 KDM3AQ9Y4C1 1321 aa14.69□□□□□ -0.06
PTCH1-221ENST00000550914 PRR33A8MZF0 331 aa14.69□□□□□ -0.06
PTCH1-221ENST00000550914 M0QZ92 97 aa14.69□□□□□ -0.06
PTCH1-221ENST00000550914 SLC26A2P50443 739 aa14.69□□□□□ -0.06
PTCH1-221ENST00000550914 COL9A3Q14050 684 aaPredicted RBP14.69□□□□□ -0.06
PTCH1-221ENST00000550914 BTG3Q14201 252 aaPredicted RBP14.69□□□□□ -0.06
PTCH1-221ENST00000550914 CEP55Q53EZ4 464 aa14.69□□□□□ -0.06
PTCH1-221ENST00000550914 NAALADL2Q58DX5 795 aa14.69□□□□□ -0.06
PTCH1-221ENST00000550914 RNF20Q5VTR2 975 aa14.69□□□□□ -0.06
PTCH1-221ENST00000550914 APOA5Q6Q788 366 aa14.69□□□□□ -0.06
PTCH1-221ENST00000550914 MICU3Q86XE3 530 aa14.69□□□□□ -0.06
PTCH1-221ENST00000550914 CMTR2Q8IYT2 770 aaKnown RBP14.69□□□□□ -0.06
PTCH1-221ENST00000550914 CRIPAKQ8N1N5 446 aa14.69□□□□□ -0.06
PTCH1-221ENST00000550914 NME8Q8N427 588 aa14.69□□□□□ -0.06
PTCH1-221ENST00000550914 CCDC82Q8N4S0 544 aa14.69□□□□□ -0.06
PTCH1-221ENST00000550914 P2RX5Q93086 422 aa14.69□□□□□ -0.06
PTCH1-221ENST00000550914 AGO3Q9H9G7 860 aaKnown RBP14.69□□□□□ -0.06
PTCH1-221ENST00000550914 RIC8AQ9NPQ8 531 aa14.69□□□□□ -0.06
PTCH1-221ENST00000550914 CLDND1Q9NY35 253 aa14.69□□□□□ -0.06
PTCH1-221ENST00000550914 PKD2L1Q9P0L9 805 aa14.69□□□□□ -0.06
PTCH1-221ENST00000550914 TRPV2Q9Y5S1 764 aa14.69□□□□□ -0.06
PTCH1-221ENST00000550914 WDFY4Q6ZS81 3184 aa14.69□□□□□ -0.06
PTCH1-221ENST00000550914 CNTNAP5Q8WYK1 1306 aa14.68□□□□□ -0.06
PTCH1-221ENST00000550914 IGSF9BQ9UPX0 1349 aa14.68□□□□□ -0.06
PTCH1-221ENST00000550914 GRM6O15303 877 aa14.68□□□□□ -0.06
PTCH1-221ENST00000550914 MMP1P03956 469 aa14.68□□□□□ -0.06
PTCH1-221ENST00000550914 CD52P31358 61 aa14.68□□□□□ -0.06
PTCH1-221ENST00000550914 LTBRP36941 435 aa14.68□□□□□ -0.06
PTCH1-221ENST00000550914 ACTR2P61160 394 aa14.68□□□□□ -0.06
PTCH1-221ENST00000550914 IGBP1P78318 339 aa14.68□□□□□ -0.06
PTCH1-221ENST00000550914 ZP2Q05996 745 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms