RNA–Protein interactions for RNA: ENST00000550504.5

RAB5C-207, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-207ENST00000550504 SEPT4O43236 478 aa11.53□□□□□ -0.56
RAB5C-207ENST00000550504 SLITRK3O94933 977 aa11.53□□□□□ -0.56
RAB5C-207ENST00000550504 ZNF202O95125 648 aa11.53□□□□□ -0.56
RAB5C-207ENST00000550504 MBD3O95983 291 aa11.53□□□□□ -0.56
RAB5C-207ENST00000550504 MYCP01106 439 aaPredicted RBP11.53□□□□□ -0.56
RAB5C-207ENST00000550504 SPATA31C1P0DKV0 1188 aa11.53□□□□□ -0.56
RAB5C-207ENST00000550504 TCF7P36402 384 aaPredicted RBP11.53□□□□□ -0.56
RAB5C-207ENST00000550504 STAT6P42226 847 aa11.53□□□□□ -0.56
RAB5C-207ENST00000550504 IRX5P78411 483 aaPredicted RBP11.53□□□□□ -0.56
RAB5C-207ENST00000550504 MLLT1Q03111 559 aaPredicted RBP11.53□□□□□ -0.56
RAB5C-207ENST00000550504 UTP14CQ5TAP6 766 aaKnown RBP11.53□□□□□ -0.56
RAB5C-207ENST00000550504 MAP3K21Q5TCX8 1036 aa11.53□□□□□ -0.56
RAB5C-207ENST00000550504 TRMT1LQ7Z2T5 733 aaKnown RBP11.53□□□□□ -0.56
RAB5C-207ENST00000550504 CCDC60Q8IWA6 550 aaPredicted RBP11.53□□□□□ -0.56
RAB5C-207ENST00000550504 FMR1NBQ8N0W7 255 aaPredicted RBP11.53□□□□□ -0.56
RAB5C-207ENST00000550504 ENGASEQ8NFI3 743 aa11.53□□□□□ -0.56
RAB5C-207ENST00000550504 RDM1Q8NG50 284 aa11.53□□□□□ -0.56
RAB5C-207ENST00000550504 EMID1Q96A84 441 aaPredicted RBP11.53□□□□□ -0.56
RAB5C-207ENST00000550504 HSD17B14Q9BPX1 270 aa11.53□□□□□ -0.56
RAB5C-207ENST00000550504 LXNQ9BS40 222 aa11.53□□□□□ -0.56
RAB5C-207ENST00000550504 POLR3CQ9BUI4 534 aaPredicted RBP11.53□□□□□ -0.56
RAB5C-207ENST00000550504 AP5M1Q9H0R1 490 aa11.53□□□□□ -0.56
RAB5C-207ENST00000550504 TUFT1Q9NNX1 390 aa11.53□□□□□ -0.56
RAB5C-207ENST00000550504 DDX19AQ9NUU7 478 aaKnown RBP11.53□□□□□ -0.56
RAB5C-207ENST00000550504 DACT1Q9NYF0 836 aa11.53□□□□□ -0.56
RAB5C-207ENST00000550504 SERTAD1Q9UHV2 236 aa11.53□□□□□ -0.56
RAB5C-207ENST00000550504 KDM3AQ9Y4C1 1321 aa11.53□□□□□ -0.56
RAB5C-207ENST00000550504 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.52□□□□□ -0.57
RAB5C-207ENST00000550504 E9PMD0 336 aa11.52□□□□□ -0.57
RAB5C-207ENST00000550504 TRAK2O60296 914 aa11.52□□□□□ -0.57
RAB5C-207ENST00000550504 KINO60870 393 aaKnown RBP11.52□□□□□ -0.57
RAB5C-207ENST00000550504 ATG7O95352 703 aa11.52□□□□□ -0.57
RAB5C-207ENST00000550504 MYCNP04198 464 aaPredicted RBP11.52□□□□□ -0.57
RAB5C-207ENST00000550504 P4HBP07237 508 aaKnown RBP11.52□□□□□ -0.57
RAB5C-207ENST00000550504 MMP3P08254 477 aa11.52□□□□□ -0.57
RAB5C-207ENST00000550504 RARBP10826 455 aa11.52□□□□□ -0.57
RAB5C-207ENST00000550504 RPA1P27694 616 aa11.52□□□□□ -0.57
RAB5C-207ENST00000550504 QARSP47897 775 aaKnown RBP11.52□□□□□ -0.57
RAB5C-207ENST00000550504 BEX3Q00994 111 aa11.52□□□□□ -0.57
RAB5C-207ENST00000550504 SNW1Q13573 536 aaKnown RBP11.52□□□□□ -0.57
RAB5C-207ENST00000550504 LONRF3Q496Y0 759 aa11.52□□□□□ -0.57
RAB5C-207ENST00000550504 SLC9C1Q4G0N8 1177 aa11.52□□□□□ -0.57
RAB5C-207ENST00000550504 TMEM119Q4V9L6 283 aa11.52□□□□□ -0.57
RAB5C-207ENST00000550504 KCNK18Q7Z418 384 aa11.52□□□□□ -0.57
RAB5C-207ENST00000550504 TRIM50Q86XT4 487 aa11.52□□□□□ -0.57
RAB5C-207ENST00000550504 PPTC7Q8NI37 304 aa11.52□□□□□ -0.57
RAB5C-207ENST00000550504 NEK9Q8TD19 979 aa11.52□□□□□ -0.57
RAB5C-207ENST00000550504 LRRC15Q8TF66 581 aa11.52□□□□□ -0.57
RAB5C-207ENST00000550504 ATP6V0A1Q93050 837 aa11.52□□□□□ -0.57
RAB5C-207ENST00000550504 PCYT2Q99447 389 aa11.52□□□□□ -0.57
RAB5C-207ENST00000550504 ANP32EQ9BTT0 268 aa11.52□□□□□ -0.57
RAB5C-207ENST00000550504 NT5C3AQ9H0P0 336 aa11.52□□□□□ -0.57
RAB5C-207ENST00000550504 HMX1Q9NP08 348 aaPredicted RBP11.52□□□□□ -0.57
RAB5C-207ENST00000550504 ZNF302Q9NR11 478 aa11.52□□□□□ -0.57
RAB5C-207ENST00000550504 WRAP73Q9P2S5 460 aaPredicted RBP11.52□□□□□ -0.57
RAB5C-207ENST00000550504 MYADML2A6NDP7 307 aa11.51□□□□□ -0.57
RAB5C-207ENST00000550504 DUSP11O75319 330 aaKnown RBP11.51□□□□□ -0.57
RAB5C-207ENST00000550504 PGK1P00558 417 aa11.51□□□□□ -0.57
RAB5C-207ENST00000550504 SSBP05455 408 aaKnown RBP eCLIP11.51□□□□□ -0.57
RAB5C-207ENST00000550504 ZNF286BP0CG31 522 aa11.51□□□□□ -0.57
RAB5C-207ENST00000550504 MARK3P27448 753 aa11.51□□□□□ -0.57
RAB5C-207ENST00000550504 PSMC5P62195 406 aa11.51□□□□□ -0.57
RAB5C-207ENST00000550504 PSMC6P62333 389 aa11.51□□□□□ -0.57
RAB5C-207ENST00000550504 DHX8Q14562 1220 aaKnown RBP11.51□□□□□ -0.57
RAB5C-207ENST00000550504 E2F4Q16254 413 aa11.51□□□□□ -0.57
RAB5C-207ENST00000550504 HYIQ5T013 277 aa11.51□□□□□ -0.57
RAB5C-207ENST00000550504 FAM160B1Q5W0V3 765 aa11.51□□□□□ -0.57
RAB5C-207ENST00000550504 PDXDC2PQ6P474 469 aa11.51□□□□□ -0.57
RAB5C-207ENST00000550504 KRBA2Q6ZNG9 492 aa11.51□□□□□ -0.57
RAB5C-207ENST00000550504 CKAP2LQ8IYA6 745 aa11.51□□□□□ -0.57
RAB5C-207ENST00000550504 IQUBQ8NA54 791 aa11.51□□□□□ -0.57
RAB5C-207ENST00000550504 CNNM3Q8NE01 707 aa11.51□□□□□ -0.57
RAB5C-207ENST00000550504 PIGOQ8TEQ8 1089 aa11.51□□□□□ -0.57
RAB5C-207ENST00000550504 STAMQ92783 540 aa11.51□□□□□ -0.57
RAB5C-207ENST00000550504 GLG1Q92896 1179 aa11.51□□□□□ -0.57
RAB5C-207ENST00000550504 MCOLN1Q9GZU1 580 aa11.51□□□□□ -0.57
RAB5C-207ENST00000550504 UNC93B1Q9H1C4 597 aa11.51□□□□□ -0.57
RAB5C-207ENST00000550504 AZI2Q9H6S1 392 aa11.51□□□□□ -0.57
RAB5C-207ENST00000550504 ZSWIM4Q9H7M6 989 aa11.51□□□□□ -0.57
RAB5C-207ENST00000550504 XPNPEP3Q9NQH7 507 aa11.51□□□□□ -0.57
RAB5C-207ENST00000550504 PCDH10Q9P2E7 1040 aa11.51□□□□□ -0.57
RAB5C-207ENST00000550504 DDX20Q9UHI6 824 aaKnown RBP11.51□□□□□ -0.57
RAB5C-207ENST00000550504 Q9Y3F1 56 aa11.51□□□□□ -0.57
RAB5C-207ENST00000550504 SYNRGQ9UMZ2 1314 aa11.51□□□□□ -0.57
RAB5C-207ENST00000550504 IGKV6D-21A0A0A0MT36 114 aa11.5□□□□□ -0.57
RAB5C-207ENST00000550504 TMEM150BA6NC51 233 aa11.5□□□□□ -0.57
RAB5C-207ENST00000550504 CCDC85CA6NKD9 419 aa11.5□□□□□ -0.57
RAB5C-207ENST00000550504 ZBTB39O15060 712 aa11.5□□□□□ -0.57
RAB5C-207ENST00000550504 SLC26A4O43511 780 aa11.5□□□□□ -0.57
RAB5C-207ENST00000550504 ACTN4O43707 911 aaKnown RBP11.5□□□□□ -0.57
RAB5C-207ENST00000550504 ZNF862O60290 1169 aa11.5□□□□□ -0.57
RAB5C-207ENST00000550504 LGR5O75473 907 aa11.5□□□□□ -0.57
RAB5C-207ENST00000550504 LGALS2P05162 132 aa11.5□□□□□ -0.57
RAB5C-207ENST00000550504 MYL3P08590 195 aa11.5□□□□□ -0.57
RAB5C-207ENST00000550504 C6orf222P0C671 652 aaPredicted RBP11.5□□□□□ -0.57
RAB5C-207ENST00000550504 AFMP43652 599 aa11.5□□□□□ -0.57
RAB5C-207ENST00000550504 STAT5BP51692 787 aa11.5□□□□□ -0.57
RAB5C-207ENST00000550504 PRKCEQ02156 737 aa11.5□□□□□ -0.57
RAB5C-207ENST00000550504 MCM6Q14566 821 aa11.5□□□□□ -0.57
RAB5C-207ENST00000550504 CAMK4Q16566 473 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms