RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 INSL6Q9Y581 213 aa15.31■□□□□ 0.04
NUP188-211ENST00000550219 NRCAMQ92823 1304 aa15.31■□□□□ 0.04
NUP188-211ENST00000550219 KLF18A0A0U1RQI7 1052 aa15.3■□□□□ 0.04
NUP188-211ENST00000550219 GSTTP1A0A1W2PQM5 241 aa15.3■□□□□ 0.04
NUP188-211ENST00000550219 GHRP10912 638 aa15.3■□□□□ 0.04
NUP188-211ENST00000550219 PDIA3P30101 505 aaKnown RBP15.3■□□□□ 0.04
NUP188-211ENST00000550219 MKRN4PQ13434 485 aaPredicted RBP15.3■□□□□ 0.04
NUP188-211ENST00000550219 NID2Q14112 1375 aa15.3■□□□□ 0.04
NUP188-211ENST00000550219 GRIK4Q16099 956 aa15.3■□□□□ 0.04
NUP188-211ENST00000550219 TYW1BQ6NUM6 668 aa15.3■□□□□ 0.04
NUP188-211ENST00000550219 SEPT1Q8WYJ6 367 aa15.3■□□□□ 0.04
NUP188-211ENST00000550219 HLA-CQ95604 372 aa15.3■□□□□ 0.04
NUP188-211ENST00000550219 IFIH1Q9BYX4 1025 aaKnown RBP15.3■□□□□ 0.04
NUP188-211ENST00000550219 JPH1Q9HDC5 661 aaPredicted RBP15.3■□□□□ 0.04
NUP188-211ENST00000550219 JADE2Q9NQC1 790 aa15.3■□□□□ 0.04
NUP188-211ENST00000550219 ERAP1Q9NZ08 941 aa15.3■□□□□ 0.04
NUP188-211ENST00000550219 TUBE1Q9UJT0 475 aa15.3■□□□□ 0.04
NUP188-211ENST00000550219 COG5Q9UP83 839 aa15.3■□□□□ 0.04
NUP188-211ENST00000550219 BMP1P13497 986 aa15.29■□□□□ 0.04
NUP188-211ENST00000550219 ADCY7P51828 1080 aa15.29■□□□□ 0.04
NUP188-211ENST00000550219 ADAM17P78536 824 aa15.29■□□□□ 0.04
NUP188-211ENST00000550219 ME3Q16798 604 aa15.29■□□□□ 0.04
NUP188-211ENST00000550219 PPP1R18Q6NYC8 613 aa15.29■□□□□ 0.04
NUP188-211ENST00000550219 ZBTB10Q96DT7 871 aa15.29■□□□□ 0.04
NUP188-211ENST00000550219 LARP6Q9BRS8 491 aaKnown RBP15.29■□□□□ 0.04
NUP188-211ENST00000550219 ANO3Q9BYT9 981 aa15.29■□□□□ 0.04
NUP188-211ENST00000550219 TRPC6Q9Y210 931 aa15.29■□□□□ 0.04
NUP188-211ENST00000550219 RBM19Q9Y4C8 960 aaKnown RBP15.29■□□□□ 0.04
NUP188-211ENST00000550219 PRRC2BQ5JSZ5 2229 aaKnown RBP15.29■□□□□ 0.04
NUP188-211ENST00000550219 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.28■□□□□ 0.04
NUP188-211ENST00000550219 STXBP3O00186 592 aa15.28■□□□□ 0.04
NUP188-211ENST00000550219 PFKFB2O60825 505 aa15.28■□□□□ 0.04
NUP188-211ENST00000550219 HTRA4P83105 476 aaPredicted RBP15.28■□□□□ 0.04
NUP188-211ENST00000550219 TAF2Q6P1X5 1199 aa15.28■□□□□ 0.04
NUP188-211ENST00000550219 RSPH3Q86UC2 560 aa15.28■□□□□ 0.04
NUP188-211ENST00000550219 DNAJB3Q8WWF6 145 aa15.28■□□□□ 0.04
NUP188-211ENST00000550219 APBB2Q92870 758 aa15.28■□□□□ 0.04
NUP188-211ENST00000550219 ZSCAN31Q96LW9 406 aaPredicted RBP15.28■□□□□ 0.04
NUP188-211ENST00000550219 MXRA8Q9BRK3 442 aa15.28■□□□□ 0.04
NUP188-211ENST00000550219 SDF4Q9BRK5 362 aa15.28■□□□□ 0.04
NUP188-211ENST00000550219 FAM49AQ9H0Q0 323 aaPredicted RBP15.28■□□□□ 0.04
NUP188-211ENST00000550219 SMARCAD1Q9H4L7 1026 aa15.28■□□□□ 0.04
NUP188-211ENST00000550219 RIC8AQ9NPQ8 531 aa15.28■□□□□ 0.04
NUP188-211ENST00000550219 FAM217BQ9NTX9 383 aaPredicted RBP15.28■□□□□ 0.04
NUP188-211ENST00000550219 TMEM260Q9NX78 707 aa15.28■□□□□ 0.04
NUP188-211ENST00000550219 SLC9A2Q9UBY0 812 aa15.28■□□□□ 0.04
NUP188-211ENST00000550219 V9GY48 417 aaPredicted RBP15.28■□□□□ 0.04
NUP188-211ENST00000550219 TCF20Q9UGU0 1960 aaKnown RBP15.27■□□□□ 0.04
NUP188-211ENST00000550219 DDX39AO00148 427 aaKnown RBP15.27■□□□□ 0.04
NUP188-211ENST00000550219 LARGE1O95461 756 aa15.27■□□□□ 0.04
NUP188-211ENST00000550219 CHRNA1P02708 482 aa15.27■□□□□ 0.04
NUP188-211ENST00000550219 FAM26DQ5JW98 314 aa15.27■□□□□ 0.04
NUP188-211ENST00000550219 CYP2W1Q8TAV3 490 aa15.27■□□□□ 0.04
NUP188-211ENST00000550219 SP7Q8TDD2 431 aaPredicted RBP15.27■□□□□ 0.04
NUP188-211ENST00000550219 AZI2Q9H6S1 392 aa15.27■□□□□ 0.04
NUP188-211ENST00000550219 SH2B1Q9NRF2 756 aaPredicted RBP15.27■□□□□ 0.04
NUP188-211ENST00000550219 KCNH7Q9NS40 1196 aa15.27■□□□□ 0.04
NUP188-211ENST00000550219 CDY2AQ9Y6F7 541 aa15.27■□□□□ 0.04
NUP188-211ENST00000550219 SMCO2A6NFE2 343 aa15.26■□□□□ 0.03
NUP188-211ENST00000550219 ARP10275 920 aa15.26■□□□□ 0.03
NUP188-211ENST00000550219 CDC27P30260 824 aa15.26■□□□□ 0.03
NUP188-211ENST00000550219 ZNF76P36508 570 aa15.26■□□□□ 0.03
NUP188-211ENST00000550219 MGAT3Q09327 533 aa15.26■□□□□ 0.03
NUP188-211ENST00000550219 FUT2Q10981 343 aa15.26■□□□□ 0.03
NUP188-211ENST00000550219 LPIN1Q14693 890 aa15.26■□□□□ 0.03
NUP188-211ENST00000550219 EPC2Q52LR7 807 aa15.26■□□□□ 0.03
NUP188-211ENST00000550219 TRAPPC12Q8WVT3 735 aa15.26■□□□□ 0.03
NUP188-211ENST00000550219 TOP1MTQ969P6 601 aa15.26■□□□□ 0.03
NUP188-211ENST00000550219 TMX3Q96JJ7 454 aa15.26■□□□□ 0.03
NUP188-211ENST00000550219 PCYT2Q99447 389 aa15.26■□□□□ 0.03
NUP188-211ENST00000550219 LMCD1Q9NZU5 365 aa15.26■□□□□ 0.03
NUP188-211ENST00000550219 COL4A6Q14031 1691 aa15.25■□□□□ 0.03
NUP188-211ENST00000550219 hCG_1984214I3L0E3 225 aa15.25■□□□□ 0.03
NUP188-211ENST00000550219 MAFGO15525 162 aa15.25■□□□□ 0.03
NUP188-211ENST00000550219 CSPG5O95196 566 aa15.25■□□□□ 0.03
NUP188-211ENST00000550219 FOSP01100 380 aaPredicted RBP15.25■□□□□ 0.03
NUP188-211ENST00000550219 INSRRP14616 1297 aa15.25■□□□□ 0.03
NUP188-211ENST00000550219 METAP2P50579 478 aaKnown RBP eCLIP15.25■□□□□ 0.03
NUP188-211ENST00000550219 ACTR2P61160 394 aa15.25■□□□□ 0.03
NUP188-211ENST00000550219 MRPS6P82932 125 aaKnown RBP15.25■□□□□ 0.03
NUP188-211ENST00000550219 TMEM62Q0P6H9 643 aa15.25■□□□□ 0.03
NUP188-211ENST00000550219 ST3GAL1Q11201 340 aa15.25■□□□□ 0.03
NUP188-211ENST00000550219 SCRN1Q12765 414 aa15.25■□□□□ 0.03
NUP188-211ENST00000550219 GPM6BQ13491 265 aa15.25■□□□□ 0.03
NUP188-211ENST00000550219 MARCH8Q5T0T0 291 aa15.25■□□□□ 0.03
NUP188-211ENST00000550219 JAKMIP3Q5VZ66 844 aa15.25■□□□□ 0.03
NUP188-211ENST00000550219 ZNF713Q8N859 430 aaPredicted RBP15.25■□□□□ 0.03
NUP188-211ENST00000550219 GTF3C6Q969F1 213 aa15.25■□□□□ 0.03
NUP188-211ENST00000550219 SAMD11Q96NU1 681 aa15.25■□□□□ 0.03
NUP188-211ENST00000550219 UIMC1Q96RL1 719 aa15.25■□□□□ 0.03
NUP188-211ENST00000550219 SLKQ9H2G2 1235 aaPredicted RBP15.25■□□□□ 0.03
NUP188-211ENST00000550219 UBE2ZQ9H832 354 aaPredicted RBP15.25■□□□□ 0.03
NUP188-211ENST00000550219 AGO4Q9HCK5 861 aaKnown RBP15.25■□□□□ 0.03
NUP188-211ENST00000550219 BARHL2Q9NY43 387 aa15.25■□□□□ 0.03
NUP188-211ENST00000550219 REV3LO60673 3130 aa15.24■□□□□ 0.03
NUP188-211ENST00000550219 NFASCO94856 1347 aa15.24■□□□□ 0.03
NUP188-211ENST00000550219 CCDC196A0A1B0GTZ2 297 aa15.24■□□□□ 0.03
NUP188-211ENST00000550219 MBLAC1A4D2B0 266 aaPredicted RBP15.24■□□□□ 0.03
NUP188-211ENST00000550219 K7ELQ4 463 aaPredicted RBP15.24■□□□□ 0.03
NUP188-211ENST00000550219 COL9A1P20849 921 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms