RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 BMPR1AP36894 532 aa17.68■□□□□ 0.42
RAB5C-205ENST00000550013 IGBP1P78318 339 aa17.68■□□□□ 0.42
RAB5C-205ENST00000550013 IRX6P78412 446 aaPredicted RBP17.68■□□□□ 0.42
RAB5C-205ENST00000550013 MTMR1Q13613 665 aa17.68■□□□□ 0.42
RAB5C-205ENST00000550013 RSPH3Q86UC2 560 aa17.68■□□□□ 0.42
RAB5C-205ENST00000550013 MTA3Q9BTC8 594 aa17.68■□□□□ 0.42
RAB5C-205ENST00000550013 LRRC2Q9BYS8 371 aa17.68■□□□□ 0.42
RAB5C-205ENST00000550013 LSG1Q9H089 658 aaKnown RBP17.68■□□□□ 0.42
RAB5C-205ENST00000550013 SMARCAD1Q9H4L7 1026 aa17.68■□□□□ 0.42
RAB5C-205ENST00000550013 PCDHA6Q9UN73 950 aa17.68■□□□□ 0.42
RAB5C-205ENST00000550013 PCDHA8Q9Y5H6 950 aa17.68■□□□□ 0.42
RAB5C-205ENST00000550013 C5orf67F2Z3F1 127 aa17.67■□□□□ 0.42
RAB5C-205ENST00000550013 CSPG5O95196 566 aa17.67■□□□□ 0.42
RAB5C-205ENST00000550013 LTBRP36941 435 aa17.67■□□□□ 0.42
RAB5C-205ENST00000550013 TSHZ1Q6ZSZ6 1077 aa17.67■□□□□ 0.42
RAB5C-205ENST00000550013 TMTC2Q8N394 836 aa17.67■□□□□ 0.42
RAB5C-205ENST00000550013 LINC01599Q8WXQ3 324 aa17.67■□□□□ 0.42
RAB5C-205ENST00000550013 TMEM87BQ96K49 555 aa17.67■□□□□ 0.42
RAB5C-205ENST00000550013 PCYT2Q99447 389 aa17.67■□□□□ 0.42
RAB5C-205ENST00000550013 C11orf84Q9BUA3 381 aaPredicted RBP17.67■□□□□ 0.42
RAB5C-205ENST00000550013 FAM49AQ9H0Q0 323 aaPredicted RBP17.67■□□□□ 0.42
RAB5C-205ENST00000550013 AGO3Q9H9G7 860 aaKnown RBP17.67■□□□□ 0.42
RAB5C-205ENST00000550013 JADE2Q9NQC1 790 aa17.67■□□□□ 0.42
RAB5C-205ENST00000550013 TRIOO75962 3097 aa17.66■□□□□ 0.42
RAB5C-205ENST00000550013 SPDYE3A6NKU9 549 aa17.66■□□□□ 0.42
RAB5C-205ENST00000550013 SLC27A2O14975 620 aa17.66■□□□□ 0.42
RAB5C-205ENST00000550013 RB1P06400 928 aa17.66■□□□□ 0.42
RAB5C-205ENST00000550013 CALM1P0DP23 149 aa17.66■□□□□ 0.42
RAB5C-205ENST00000550013 CALM2P0DP24 149 aa17.66■□□□□ 0.42
RAB5C-205ENST00000550013 CALM3P0DP25 149 aa17.66■□□□□ 0.42
RAB5C-205ENST00000550013 INSRRP14616 1297 aa17.66■□□□□ 0.42
RAB5C-205ENST00000550013 CD52P31358 61 aa17.66■□□□□ 0.42
RAB5C-205ENST00000550013 MRPS6P82932 125 aaKnown RBP17.66■□□□□ 0.42
RAB5C-205ENST00000550013 ZP2Q05996 745 aa17.66■□□□□ 0.42
RAB5C-205ENST00000550013 HYAL1Q12794 435 aa17.66■□□□□ 0.42
RAB5C-205ENST00000550013 BTG3Q14201 252 aaPredicted RBP17.66■□□□□ 0.42
RAB5C-205ENST00000550013 CLUL1Q15846 466 aa17.66■□□□□ 0.42
RAB5C-205ENST00000550013 TMTC3Q6ZXV5 915 aa17.66■□□□□ 0.42
RAB5C-205ENST00000550013 HEATR3Q7Z4Q2 680 aa17.66■□□□□ 0.42
RAB5C-205ENST00000550013 CLP1Q92989 425 aaKnown RBP17.66■□□□□ 0.42
RAB5C-205ENST00000550013 ZNF689Q96CS4 500 aaPredicted RBP17.66■□□□□ 0.42
RAB5C-205ENST00000550013 POTEB3A0JP26 581 aa17.65■□□□□ 0.42
RAB5C-205ENST00000550013 GTF2F1P35269 517 aaKnown RBP eCLIP17.65■□□□□ 0.42
RAB5C-205ENST00000550013 LIFRP42702 1097 aa17.65■□□□□ 0.42
RAB5C-205ENST00000550013 DLX2Q07687 328 aaPredicted RBP17.65■□□□□ 0.42
RAB5C-205ENST00000550013 POTEBQ6S5H4 581 aa17.65■□□□□ 0.42
RAB5C-205ENST00000550013 CYP2W1Q8TAV3 490 aa17.65■□□□□ 0.42
RAB5C-205ENST00000550013 TRAPPC12Q8WVT3 735 aa17.65■□□□□ 0.42
RAB5C-205ENST00000550013 LMAN2LQ9H0V9 348 aa17.65■□□□□ 0.42
RAB5C-205ENST00000550013 JPH1Q9HDC5 661 aaPredicted RBP17.65■□□□□ 0.42
RAB5C-205ENST00000550013 RWDD3Q9Y3V2 267 aa17.65■□□□□ 0.42
RAB5C-205ENST00000550013 SLC12A7Q9Y666 1083 aa17.65■□□□□ 0.42
RAB5C-205ENST00000550013 PRR33A8MZF0 331 aa17.64■□□□□ 0.41
RAB5C-205ENST00000550013 DGKIO75912 1065 aa17.64■□□□□ 0.41
RAB5C-205ENST00000550013 ALADP13716 330 aa17.64■□□□□ 0.41
RAB5C-205ENST00000550013 TMEM62Q0P6H9 643 aa17.64■□□□□ 0.41
RAB5C-205ENST00000550013 CTC1Q2NKJ3 1217 aa17.64■□□□□ 0.41
RAB5C-205ENST00000550013 CREB3L3Q68CJ9 461 aa17.64■□□□□ 0.41
RAB5C-205ENST00000550013 RTN4RL1Q86UN2 441 aaPredicted RBP17.64■□□□□ 0.41
RAB5C-205ENST00000550013 MICU3Q86XE3 530 aa17.64■□□□□ 0.41
RAB5C-205ENST00000550013 FANCBQ8NB91 859 aa17.64■□□□□ 0.41
RAB5C-205ENST00000550013 PGBD1Q96JS3 809 aa17.64■□□□□ 0.41
RAB5C-205ENST00000550013 UIMC1Q96RL1 719 aa17.64■□□□□ 0.41
RAB5C-205ENST00000550013 ALG13Q9NP73 1137 aaKnown RBP17.64■□□□□ 0.41
RAB5C-205ENST00000550013 KCNH7Q9NS40 1196 aa17.64■□□□□ 0.41
RAB5C-205ENST00000550013 SLC9A2Q9UBY0 812 aa17.64■□□□□ 0.41
RAB5C-205ENST00000550013 TRPC6Q9Y210 931 aa17.64■□□□□ 0.41
RAB5C-205ENST00000550013 FAM50BQ9Y247 325 aa17.64■□□□□ 0.41
RAB5C-205ENST00000550013 MRPL42Q9Y6G3 142 aaKnown RBP17.64■□□□□ 0.41
RAB5C-205ENST00000550013 PIEZO1Q92508 2521 aa17.64■□□□□ 0.41
RAB5C-205ENST00000550013 RRN3P2A6NIE6 340 aa17.63■□□□□ 0.41
RAB5C-205ENST00000550013 LINC01565O15544 149 aa17.63■□□□□ 0.41
RAB5C-205ENST00000550013 DCXO43602 365 aa17.63■□□□□ 0.41
RAB5C-205ENST00000550013 PLCB4Q15147 1175 aa17.63■□□□□ 0.41
RAB5C-205ENST00000550013 WWC2Q6AWC2 1192 aa17.63■□□□□ 0.41
RAB5C-205ENST00000550013 TYW1BQ6NUM6 668 aa17.63■□□□□ 0.41
RAB5C-205ENST00000550013 MXRA8Q9BRK3 442 aa17.63■□□□□ 0.41
RAB5C-205ENST00000550013 ESYT1Q9BSJ8 1104 aa17.63■□□□□ 0.41
RAB5C-205ENST00000550013 IGFLR1Q9H665 355 aa17.63■□□□□ 0.41
RAB5C-205ENST00000550013 AZI2Q9H6S1 392 aa17.63■□□□□ 0.41
RAB5C-205ENST00000550013 PRKAG3Q9UGI9 489 aa17.63■□□□□ 0.41
RAB5C-205ENST00000550013 TRPV2Q9Y5S1 764 aa17.63■□□□□ 0.41
RAB5C-205ENST00000550013 C19orf67A6NJJ6 358 aa17.62■□□□□ 0.41
RAB5C-205ENST00000550013 MAFGO15525 162 aa17.62■□□□□ 0.41
RAB5C-205ENST00000550013 NCK2O43639 380 aa17.62■□□□□ 0.41
RAB5C-205ENST00000550013 MMP1P03956 469 aa17.62■□□□□ 0.41
RAB5C-205ENST00000550013 ARP10275 920 aa17.62■□□□□ 0.41
RAB5C-205ENST00000550013 ACTR2P61160 394 aa17.62■□□□□ 0.41
RAB5C-205ENST00000550013 ITGB3BPQ13352 177 aaPredicted RBP17.62■□□□□ 0.41
RAB5C-205ENST00000550013 CAMK1Q14012 370 aa17.62■□□□□ 0.41
RAB5C-205ENST00000550013 NECTIN1Q15223 517 aa17.62■□□□□ 0.41
RAB5C-205ENST00000550013 PAN2Q504Q3 1202 aaKnown RBP17.62■□□□□ 0.41
RAB5C-205ENST00000550013 IER5Q5VY09 327 aa17.62■□□□□ 0.41
RAB5C-205ENST00000550013 SGMS1Q86VZ5 419 aa17.62■□□□□ 0.41
RAB5C-205ENST00000550013 ADHFE1Q8IWW8 467 aa17.62■□□□□ 0.41
RAB5C-205ENST00000550013 CRIPAKQ8N1N5 446 aa17.62■□□□□ 0.41
RAB5C-205ENST00000550013 PADI3Q9ULW8 664 aa17.62■□□□□ 0.41
RAB5C-205ENST00000550013 PLAGL2Q9UPG8 496 aa17.62■□□□□ 0.41
RAB5C-205ENST00000550013 CNTNAP5Q8WYK1 1306 aa17.62■□□□□ 0.41
RAB5C-205ENST00000550013 EVPLQ92817 2033 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms