RNA–Protein interactions for RNA: ENST00000549935.6

CALCOCO1-217, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 5

Gene CALCOCO1, Length 2,112 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-217ENST00000549935 NEDD1Q8NHV4 660 aa13.99□□□□□ -0.17
CALCOCO1-217ENST00000549935 TATDN2Q93075 761 aa13.99□□□□□ -0.17
CALCOCO1-217ENST00000549935 CENPTQ96BT3 561 aa13.99□□□□□ -0.17
CALCOCO1-217ENST00000549935 PNMA5Q96PV4 448 aa13.99□□□□□ -0.17
CALCOCO1-217ENST00000549935 KDM4CQ9H3R0 1056 aa13.99□□□□□ -0.17
CALCOCO1-217ENST00000549935 PPANQ9NQ55 473 aaKnown RBP13.99□□□□□ -0.17
CALCOCO1-217ENST00000549935 SUFUQ9UMX1 484 aa13.99□□□□□ -0.17
CALCOCO1-217ENST00000549935 FRMPD2Q68DX3 1309 aaPredicted RBP13.99□□□□□ -0.17
CALCOCO1-217ENST00000549935 DNAJC8O75937 253 aaPredicted RBP13.99□□□□□ -0.17
CALCOCO1-217ENST00000549935 ZBTB48P10074 688 aaPredicted RBP13.99□□□□□ -0.17
CALCOCO1-217ENST00000549935 PDIA5Q14554 519 aa13.99□□□□□ -0.17
CALCOCO1-217ENST00000549935 CALCRLQ16602 461 aa13.99□□□□□ -0.17
CALCOCO1-217ENST00000549935 KIAA0753Q2KHM9 967 aa13.99□□□□□ -0.17
CALCOCO1-217ENST00000549935 NBPF9Q3BBW0 867 aa13.99□□□□□ -0.17
CALCOCO1-217ENST00000549935 TMC4Q7Z404 712 aa13.99□□□□□ -0.17
CALCOCO1-217ENST00000549935 TBC1D5Q92609 795 aa13.99□□□□□ -0.17
CALCOCO1-217ENST00000549935 CDK5RAP3Q96JB5 506 aa13.99□□□□□ -0.17
CALCOCO1-217ENST00000549935 SEC16BQ96JE7 1060 aa13.99□□□□□ -0.17
CALCOCO1-217ENST00000549935 CDK5RAP2Q96SN8 1893 aa13.98□□□□□ -0.17
CALCOCO1-217ENST00000549935 A0A087X0T9 212 aa13.98□□□□□ -0.17
CALCOCO1-217ENST00000549935 ESYT2A0FGR8 921 aa13.98□□□□□ -0.17
CALCOCO1-217ENST00000549935 DNM1LO00429 736 aa13.98□□□□□ -0.17
CALCOCO1-217ENST00000549935 SLC37A4O43826 429 aa13.98□□□□□ -0.17
CALCOCO1-217ENST00000549935 KIF4AO95239 1232 aa13.98□□□□□ -0.17
CALCOCO1-217ENST00000549935 FAM228BP0C875 321 aa13.98□□□□□ -0.17
CALCOCO1-217ENST00000549935 ANXA13P27216 316 aa13.98□□□□□ -0.17
CALCOCO1-217ENST00000549935 SLC8A1P32418 973 aa13.98□□□□□ -0.17
CALCOCO1-217ENST00000549935 HPDP32754 393 aaPredicted RBP13.98□□□□□ -0.17
CALCOCO1-217ENST00000549935 CTNNA1P35221 906 aaKnown RBP13.98□□□□□ -0.17
CALCOCO1-217ENST00000549935 CACNA2D3Q8IZS8 1091 aa13.98□□□□□ -0.17
CALCOCO1-217ENST00000549935 RAD54LQ92698 747 aa13.98□□□□□ -0.17
CALCOCO1-217ENST00000549935 CNOT10Q9H9A5 744 aaKnown RBP13.98□□□□□ -0.17
CALCOCO1-217ENST00000549935 POLD4Q9HCU8 107 aa13.98□□□□□ -0.17
CALCOCO1-217ENST00000549935 CCNL1Q9UK58 526 aaPredicted RBP13.98□□□□□ -0.17
CALCOCO1-217ENST00000549935 ATAD5Q96QE3 1844 aa13.98□□□□□ -0.17
CALCOCO1-217ENST00000549935 POTEMA6NI47 508 aa13.97□□□□□ -0.17
CALCOCO1-217ENST00000549935 TDP2O95551 362 aa13.97□□□□□ -0.17
CALCOCO1-217ENST00000549935 NF2P35240 595 aa13.97□□□□□ -0.17
CALCOCO1-217ENST00000549935 BYSLQ13895 437 aaKnown RBP13.97□□□□□ -0.17
CALCOCO1-217ENST00000549935 HLTFQ14527 1009 aaKnown RBP eCLIP13.97□□□□□ -0.17
CALCOCO1-217ENST00000549935 TRIM59Q8IWR1 403 aa13.97□□□□□ -0.17
CALCOCO1-217ENST00000549935 KLHL7Q8IXQ5 586 aa13.97□□□□□ -0.17
CALCOCO1-217ENST00000549935 MYOCDQ8IZQ8 938 aa13.97□□□□□ -0.17
CALCOCO1-217ENST00000549935 LRRC57Q8N9N7 239 aa13.97□□□□□ -0.17
CALCOCO1-217ENST00000549935 COA7Q96BR5 231 aa13.97□□□□□ -0.17
CALCOCO1-217ENST00000549935 SLITRK6Q9H5Y7 841 aa13.97□□□□□ -0.17
CALCOCO1-217ENST00000549935 NLRC4Q9NPP4 1024 aa13.97□□□□□ -0.17
CALCOCO1-217ENST00000549935 SWAP70Q9UH65 585 aa13.97□□□□□ -0.17
CALCOCO1-217ENST00000549935 ODF2LQ9ULJ1 636 aa13.97□□□□□ -0.17
CALCOCO1-217ENST00000549935 BZW2Q9Y6E2 419 aaKnown RBP13.97□□□□□ -0.17
CALCOCO1-217ENST00000549935 GPR75-ASB3A0A0A6YYF3 556 aa13.97□□□□□ -0.17
CALCOCO1-217ENST00000549935 MGRN1O60291 552 aa13.97□□□□□ -0.17
CALCOCO1-217ENST00000549935 UFL1O94874 794 aa13.97□□□□□ -0.17
CALCOCO1-217ENST00000549935 SCTRP47872 440 aa13.97□□□□□ -0.17
CALCOCO1-217ENST00000549935 POLR2FP61218 127 aaKnown RBP13.97□□□□□ -0.17
CALCOCO1-217ENST00000549935 GPSM2P81274 684 aa13.97□□□□□ -0.17
CALCOCO1-217ENST00000549935 ATP2B2Q01814 1243 aa13.97□□□□□ -0.17
CALCOCO1-217ENST00000549935 TMEM119Q4V9L6 283 aa13.97□□□□□ -0.17
CALCOCO1-217ENST00000549935 GKAP1Q5VSY0 366 aaPredicted RBP13.97□□□□□ -0.17
CALCOCO1-217ENST00000549935 FAM228AQ86W67 206 aa13.97□□□□□ -0.17
CALCOCO1-217ENST00000549935 ZC3H3Q8IXZ2 948 aaKnown RBP13.97□□□□□ -0.17
CALCOCO1-217ENST00000549935 RASGEF1CQ8N431 466 aa13.97□□□□□ -0.17
CALCOCO1-217ENST00000549935 CCT6BQ92526 530 aa13.97□□□□□ -0.17
CALCOCO1-217ENST00000549935 RAPGEF5Q92565 580 aa13.97□□□□□ -0.17
CALCOCO1-217ENST00000549935 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.97□□□□□ -0.172e-6■■■□□ 18.3
CALCOCO1-217ENST00000549935 LSM14BQ9BX40 385 aaKnown RBP13.97□□□□□ -0.17
CALCOCO1-217ENST00000549935 RAB34Q9BZG1 259 aa13.97□□□□□ -0.17
CALCOCO1-217ENST00000549935 TANGO6Q9C0B7 1094 aa13.97□□□□□ -0.17
CALCOCO1-217ENST00000549935 VEZTQ9HBM0 779 aa13.97□□□□□ -0.17
CALCOCO1-217ENST00000549935 PGRMC1O00264 195 aaKnown RBP13.96□□□□□ -0.17
CALCOCO1-217ENST00000549935 KCNK3O14649 394 aa13.96□□□□□ -0.17
CALCOCO1-217ENST00000549935 SART1O43290 800 aaKnown RBP13.96□□□□□ -0.17
CALCOCO1-217ENST00000549935 PDHBP11177 359 aa13.96□□□□□ -0.17
CALCOCO1-217ENST00000549935 RFC4P35249 363 aa13.96□□□□□ -0.17
CALCOCO1-217ENST00000549935 EIF3BP55884 814 aaKnown RBP13.96□□□□□ -0.17
CALCOCO1-217ENST00000549935 EIF6P56537 245 aaKnown RBP13.96□□□□□ -0.17
CALCOCO1-217ENST00000549935 KLHL30Q0D2K2 578 aa13.96□□□□□ -0.17
CALCOCO1-217ENST00000549935 QPCTQ16769 361 aa13.96□□□□□ -0.17
CALCOCO1-217ENST00000549935 TMEM266Q2M3C6 531 aa13.96□□□□□ -0.17
CALCOCO1-217ENST00000549935 CNBD1Q8NA66 436 aa13.96□□□□□ -0.17
CALCOCO1-217ENST00000549935 CD209Q9NNX6 404 aa13.96□□□□□ -0.17
CALCOCO1-217ENST00000549935 ADCY7P51828 1080 aa13.96□□□□□ -0.18
CALCOCO1-217ENST00000549935 ASIC2Q16515 512 aa13.96□□□□□ -0.18
CALCOCO1-217ENST00000549935 FAM182BQ5T319 152 aa13.96□□□□□ -0.18
CALCOCO1-217ENST00000549935 SLFN11Q7Z7L1 901 aa13.96□□□□□ -0.18
CALCOCO1-217ENST00000549935 LRRC47Q8N1G4 583 aaKnown RBP13.96□□□□□ -0.18
CALCOCO1-217ENST00000549935 GLIS3Q8NEA6 775 aa13.96□□□□□ -0.18
CALCOCO1-217ENST00000549935 SNX29Q8TEQ0 813 aa13.96□□□□□ -0.18
CALCOCO1-217ENST00000549935 DDX12PQ92771 950 aa13.96□□□□□ -0.18
CALCOCO1-217ENST00000549935 TLCD1Q96CP7 247 aa13.96□□□□□ -0.18
CALCOCO1-217ENST00000549935 NUDT12Q9BQG2 462 aa13.96□□□□□ -0.18
CALCOCO1-217ENST00000549935 GANQ9H2C0 597 aa13.96□□□□□ -0.18
CALCOCO1-217ENST00000549935 RIOX1Q9H6W3 641 aa13.96□□□□□ -0.18
CALCOCO1-217ENST00000549935 ATP6V0A4Q9HBG4 840 aa13.96□□□□□ -0.18
CALCOCO1-217ENST00000549935 CNOT8Q9UFF9 292 aaKnown RBP13.96□□□□□ -0.18
CALCOCO1-217ENST00000549935 ADAMTS1Q9UHI8 967 aa13.96□□□□□ -0.18
CALCOCO1-217ENST00000549935 FBXL5Q9UKA1 691 aa13.96□□□□□ -0.18
CALCOCO1-217ENST00000549935 PACSIN2Q9UNF0 486 aaPredicted RBP13.96□□□□□ -0.18
CALCOCO1-217ENST00000549935 hCG_1984214I3L0E3 225 aa13.95□□□□□ -0.18
CALCOCO1-217ENST00000549935 DRD4P21917 467 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms