RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 NTRK3Q16288 839 aa6.73□□□□□ -1.33
CCDC38-208ENST00000549876 KCNT2Q6UVM3 1135 aa6.73□□□□□ -1.33
CCDC38-208ENST00000549876 Q6ZSN1 163 aa6.73□□□□□ -1.33
CCDC38-208ENST00000549876 KCTD1Q719H9 257 aa6.73□□□□□ -1.33
CCDC38-208ENST00000549876 DCAF4Q8WV16 495 aa6.73□□□□□ -1.33
CCDC38-208ENST00000549876 ZFYVE21Q9BQ24 234 aa6.73□□□□□ -1.33
CCDC38-208ENST00000549876 TACO1Q9BSH4 297 aaKnown RBP6.73□□□□□ -1.33
CCDC38-208ENST00000549876 CARD11Q9BXL7 1154 aa6.73□□□□□ -1.33
CCDC38-208ENST00000549876 DSEQ9UL01 958 aa6.73□□□□□ -1.33
CCDC38-208ENST00000549876 R3HCC1Q9Y3T6 440 aaKnown RBP6.73□□□□□ -1.33
CCDC38-208ENST00000549876 COMTP21964 271 aa6.72□□□□□ -1.33
CCDC38-208ENST00000549876 TGFB2P61812 414 aa6.72□□□□□ -1.33
CCDC38-208ENST00000549876 TOP3AQ13472 1001 aaPredicted RBP6.72□□□□□ -1.33
CCDC38-208ENST00000549876 NRN1LQ496H8 165 aa6.72□□□□□ -1.33
CCDC38-208ENST00000549876 USP39Q53GS9 565 aaKnown RBP6.72□□□□□ -1.33
CCDC38-208ENST00000549876 SGSM3Q96HU1 749 aa6.72□□□□□ -1.33
CCDC38-208ENST00000549876 KCNJ15Q99712 375 aa6.72□□□□□ -1.33
CCDC38-208ENST00000549876 RAD17O75943 681 aa6.71□□□□□ -1.34
CCDC38-208ENST00000549876 FGFR1P11362 822 aa6.71□□□□□ -1.34
CCDC38-208ENST00000549876 POLD1P28340 1107 aa6.71□□□□□ -1.34
CCDC38-208ENST00000549876 RAC3P60763 192 aa6.71□□□□□ -1.34
CCDC38-208ENST00000549876 GPR85P60893 370 aa6.71□□□□□ -1.34
CCDC38-208ENST00000549876 KRTAP1-1Q07627 177 aa6.71□□□□□ -1.34
CCDC38-208ENST00000549876 RAB33AQ14088 237 aa6.71□□□□□ -1.34
CCDC38-208ENST00000549876 HSP90AA2PQ14568 343 aaPredicted RBP6.71□□□□□ -1.34
CCDC38-208ENST00000549876 RNF151Q2KHN1 245 aa6.71□□□□□ -1.34
CCDC38-208ENST00000549876 EXTL1Q92935 676 aa6.71□□□□□ -1.34
CCDC38-208ENST00000549876 E9PSI1 815 aa6.7□□□□□ -1.34
CCDC38-208ENST00000549876 NARSO43776 548 aaKnown RBP6.7□□□□□ -1.34
CCDC38-208ENST00000549876 CUTAO60888 179 aa6.7□□□□□ -1.34
CCDC38-208ENST00000549876 SOD2P04179 222 aa6.7□□□□□ -1.34
CCDC38-208ENST00000549876 DUSP8Q13202 625 aa6.7□□□□□ -1.34
CCDC38-208ENST00000549876 STYK1Q6J9G0 422 aa6.7□□□□□ -1.34
CCDC38-208ENST00000549876 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.7□□□□□ -1.34
CCDC38-208ENST00000549876 SH3RF2Q8TEC5 729 aa6.7□□□□□ -1.34
CCDC38-208ENST00000549876 OSBP2Q969R2 916 aa6.7□□□□□ -1.34
CCDC38-208ENST00000549876 AARSD1Q9BTE6 412 aaKnown RBP6.7□□□□□ -1.34
CCDC38-208ENST00000549876 SLC39A2Q9NP94 309 aa6.7□□□□□ -1.34
CCDC38-208ENST00000549876 ARHGEF4Q9NR80 690 aa6.7□□□□□ -1.34
CCDC38-208ENST00000549876 OAZ3Q9UMX2 235 aa6.7□□□□□ -1.34
CCDC38-208ENST00000549876 SLC30A1Q9Y6M5 507 aa6.7□□□□□ -1.34
CCDC38-208ENST00000549876 PRODHO43272 600 aa6.69□□□□□ -1.34
CCDC38-208ENST00000549876 CR2P20023 1033 aa6.69□□□□□ -1.34
CCDC38-208ENST00000549876 ABHD18Q0P651 414 aa6.69□□□□□ -1.34
CCDC38-208ENST00000549876 DBPQ10586 325 aaPredicted RBP6.69□□□□□ -1.34
CCDC38-208ENST00000549876 ZNF568Q3ZCX4 644 aa6.69□□□□□ -1.34
CCDC38-208ENST00000549876 MAMDC4Q6UXC1 1216 aa6.69□□□□□ -1.34
CCDC38-208ENST00000549876 POLNQ7Z5Q5 900 aa6.69□□□□□ -1.34
CCDC38-208ENST00000549876 IFNL3Q8IZI9 196 aa6.69□□□□□ -1.34
CCDC38-208ENST00000549876 AMER2Q8N7J2 671 aa6.69□□□□□ -1.34
CCDC38-208ENST00000549876 TCRBV5S4A2TA0A5A2 114 aa6.68□□□□□ -1.34
CCDC38-208ENST00000549876 FAM47E-STBD1D6RA91 191 aa6.68□□□□□ -1.34
CCDC38-208ENST00000549876 MATN2O00339 956 aa6.68□□□□□ -1.34
CCDC38-208ENST00000549876 ZNF202O95125 648 aa6.68□□□□□ -1.34
CCDC38-208ENST00000549876 PABPC1P11940 636 aaKnown RBP6.68□□□□□ -1.34
CCDC38-208ENST00000549876 ACO1P21399 889 aaKnown RBP6.68□□□□□ -1.34
CCDC38-208ENST00000549876 PURAQ00577 322 aaKnown RBP6.68□□□□□ -1.34
CCDC38-208ENST00000549876 PTH1RQ03431 593 aa6.68□□□□□ -1.34
CCDC38-208ENST00000549876 ST13P5Q8NFI4 369 aaPredicted RBP6.68□□□□□ -1.34
CCDC38-208ENST00000549876 IPPKQ9H8X2 491 aa6.68□□□□□ -1.34
CCDC38-208ENST00000549876 ESYT3A0FGR9 886 aa6.67□□□□□ -1.34
CCDC38-208ENST00000549876 DGCR2P98153 550 aa6.67□□□□□ -1.34
CCDC38-208ENST00000549876 NAALADL2Q58DX5 795 aa6.67□□□□□ -1.34
CCDC38-208ENST00000549876 DPP8Q6V1X1 898 aaPredicted RBP6.67□□□□□ -1.34
CCDC38-208ENST00000549876 CHFRQ96EP1 664 aa6.67□□□□□ -1.34
CCDC38-208ENST00000549876 DPYSL5Q9BPU6 564 aa6.67□□□□□ -1.34
CCDC38-208ENST00000549876 CD244Q9BZW8 370 aa6.67□□□□□ -1.34
CCDC38-208ENST00000549876 BLACEA4D250 179 aa6.66□□□□□ -1.34
CCDC38-208ENST00000549876 ETV4P43268 484 aa6.66□□□□□ -1.34
CCDC38-208ENST00000549876 ZC3H6P61129 1189 aaKnown RBP6.66□□□□□ -1.34
CCDC38-208ENST00000549876 NFYCQ13952 458 aa6.66□□□□□ -1.34
CCDC38-208ENST00000549876 NOLC1Q14978 699 aaKnown RBP eCLIP6.66□□□□□ -1.34
CCDC38-208ENST00000549876 LSM12Q3MHD2 195 aaKnown RBP6.66□□□□□ -1.34
CCDC38-208ENST00000549876 ZMAT1Q5H9K5 638 aa6.66□□□□□ -1.34
CCDC38-208ENST00000549876 YOD1Q5VVQ6 348 aaPredicted RBP6.66□□□□□ -1.34
CCDC38-208ENST00000549876 NSMFQ6X4W1 530 aa6.66□□□□□ -1.34
CCDC38-208ENST00000549876 SCYL1Q96KG9 808 aa6.66□□□□□ -1.34
CCDC38-208ENST00000549876 CSRNP2Q9H175 543 aa6.66□□□□□ -1.34
CCDC38-208ENST00000549876 C11orf21Q9P2W6 132 aa6.66□□□□□ -1.34
CCDC38-208ENST00000549876 MSRB2Q9Y3D2 182 aa6.66□□□□□ -1.34
CCDC38-208ENST00000549876 ASXL2Q76L83 1435 aa6.66□□□□□ -1.34
CCDC38-208ENST00000549876 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.65□□□□□ -1.34
CCDC38-208ENST00000549876 IQCA1LA6NCM1 817 aa6.65□□□□□ -1.34
CCDC38-208ENST00000549876 FAM90A27PA6NNH2 459 aa6.65□□□□□ -1.34
CCDC38-208ENST00000549876 TBR1Q16650 682 aa6.65□□□□□ -1.34
CCDC38-208ENST00000549876 IL17DQ8TAD2 202 aa6.65□□□□□ -1.34
CCDC38-208ENST00000549876 PLA2G12BQ9BX93 195 aa6.65□□□□□ -1.34
CCDC38-208ENST00000549876 ZDHHC5Q9C0B5 715 aa6.65□□□□□ -1.34
CCDC38-208ENST00000549876 PODXL2Q9NZ53 605 aa6.65□□□□□ -1.34
CCDC38-208ENST00000549876 WDR33Q9C0J8 1336 aaKnown RBP6.65□□□□□ -1.35
CCDC38-208ENST00000549876 CDC14BO60729 498 aa6.64□□□□□ -1.35
CCDC38-208ENST00000549876 C1SP09871 688 aa6.64□□□□□ -1.35
CCDC38-208ENST00000549876 PTPN1P18031 435 aaKnown RBP6.64□□□□□ -1.35
CCDC38-208ENST00000549876 MCM7P33993 719 aa6.64□□□□□ -1.35
CCDC38-208ENST00000549876 RRADP55042 308 aa6.64□□□□□ -1.35
CCDC38-208ENST00000549876 DPTQ07507 201 aa6.64□□□□□ -1.35
CCDC38-208ENST00000549876 BTBD8Q5XKL5 378 aa6.64□□□□□ -1.35
CCDC38-208ENST00000549876 SPATC1Q76KD6 591 aa6.64□□□□□ -1.35
CCDC38-208ENST00000549876 C1orf210Q8IVY1 113 aa6.64□□□□□ -1.35
CCDC38-208ENST00000549876 CACTINQ8WUQ7 758 aaKnown RBP6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms