RNA–Protein interactions for RNA: ENST00000549655.5

BRF1-215, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,962 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-215ENST00000549655 ATP2A1O14983 1001 aa21.19■□□□□ 0.98
BRF1-215ENST00000549655 PPP1R12BO60237 982 aaPredicted RBP21.19■□□□□ 0.98
BRF1-215ENST00000549655 FECHP22830 423 aa21.19■□□□□ 0.98
BRF1-215ENST00000549655 KRT9P35527 623 aa21.19■□□□□ 0.98
BRF1-215ENST00000549655 MTF1Q14872 753 aa21.19■□□□□ 0.98
BRF1-215ENST00000549655 FKBP15Q5T1M5 1219 aa21.19■□□□□ 0.98
BRF1-215ENST00000549655 C1orf186Q6ZWK4 172 aa21.19■□□□□ 0.98
BRF1-215ENST00000549655 MIER3Q7Z3K6 550 aa21.19■□□□□ 0.98
BRF1-215ENST00000549655 BANK1Q8NDB2 785 aa21.19■□□□□ 0.98
BRF1-215ENST00000549655 COL4A3BPQ9Y5P4 624 aa21.19■□□□□ 0.98
BRF1-215ENST00000549655 SPDYE16A6NNV3 312 aaPredicted RBP21.19■□□□□ 0.98
BRF1-215ENST00000549655 RIOK3O14730 519 aaKnown RBP21.19■□□□□ 0.98
BRF1-215ENST00000549655 SYCP1Q15431 976 aa21.19■□□□□ 0.98
BRF1-215ENST00000549655 MAN2A1Q16706 1144 aa21.19■□□□□ 0.98
BRF1-215ENST00000549655 VWA3BQ502W6 1294 aa21.19■□□□□ 0.98
BRF1-215ENST00000549655 NEK9Q8TD19 979 aa21.19■□□□□ 0.98
BRF1-215ENST00000549655 TEX13BQ9BXU2 312 aa21.19■□□□□ 0.98
BRF1-215ENST00000549655 POLD4Q9HCU8 107 aa21.19■□□□□ 0.98
BRF1-215ENST00000549655 CSADQ9Y600 493 aa21.19■□□□□ 0.98
BRF1-215ENST00000549655 RAD9BQ6WBX8 426 aa21.18■□□□□ 0.98
BRF1-215ENST00000549655 WDR90Q96KV7 1748 aa21.18■□□□□ 0.98
BRF1-215ENST00000549655 ERGIC2Q96RQ1 377 aa21.18■□□□□ 0.98
BRF1-215ENST00000549655 NDST4Q9H3R1 872 aa21.18■□□□□ 0.98
BRF1-215ENST00000549655 CAPN11Q9UMQ6 739 aa21.18■□□□□ 0.98
BRF1-215ENST00000549655 MYPNQ86TC9 1320 aa21.18■□□□□ 0.98
BRF1-215ENST00000549655 PLS1Q14651 629 aa21.17■□□□□ 0.98
BRF1-215ENST00000549655 EPM2AIP1Q7L775 607 aaPredicted RBP21.17■□□□□ 0.98
BRF1-215ENST00000549655 CNKSR2Q8WXI2 1034 aa21.17■□□□□ 0.98
BRF1-215ENST00000549655 CEP63Q96MT8 703 aa21.17■□□□□ 0.98
BRF1-215ENST00000549655 DESI2Q9BSY9 194 aa21.17■□□□□ 0.98
BRF1-215ENST00000549655 MRPL44Q9H9J2 332 aaKnown RBP21.17■□□□□ 0.98
BRF1-215ENST00000549655 TBC1D22BQ9NU19 505 aa21.17■□□□□ 0.98
BRF1-215ENST00000549655 LUC7L2Q9Y383 392 aaKnown RBP21.17■□□□□ 0.98
BRF1-215ENST00000549655 MYBP10242 640 aa21.17■□□□□ 0.98
BRF1-215ENST00000549655 GAP43P17677 238 aa21.17■□□□□ 0.98
BRF1-215ENST00000549655 KLK7P49862 253 aa21.17■□□□□ 0.98
BRF1-215ENST00000549655 XRRA1Q6P2D8 792 aa21.17■□□□□ 0.98
BRF1-215ENST00000549655 TMTC1Q8IUR5 882 aa21.17■□□□□ 0.98
BRF1-215ENST00000549655 KIF18AQ8NI77 898 aa21.17■□□□□ 0.98
BRF1-215ENST00000549655 NUP58Q9BVL2 599 aa21.17■□□□□ 0.98
BRF1-215ENST00000549655 BCAS3Q9H6U6 928 aa21.17■□□□□ 0.98
BRF1-215ENST00000549655 TESPA1A2RU30 521 aaPredicted RBP21.16■□□□□ 0.98
BRF1-215ENST00000549655 RASSF10A6NK89 507 aa21.16■□□□□ 0.98
BRF1-215ENST00000549655 SFI1A8K8P3 1242 aa21.16■□□□□ 0.98
BRF1-215ENST00000549655 FAM13AO94988 1023 aa21.16■□□□□ 0.98
BRF1-215ENST00000549655 P4HBP07237 508 aaKnown RBP21.16■□□□□ 0.98
BRF1-215ENST00000549655 TRIM21P19474 475 aaKnown RBP21.16■□□□□ 0.98
BRF1-215ENST00000549655 KNOP1Q1ED39 458 aaKnown RBP21.16■□□□□ 0.98
BRF1-215ENST00000549655 EDRF1Q3B7T1 1238 aa21.16■□□□□ 0.98
BRF1-215ENST00000549655 DPY19L2Q6NUT2 758 aa21.16■□□□□ 0.98
BRF1-215ENST00000549655 PPP4R3CPQ6ZMV5 832 aa21.16■□□□□ 0.98
BRF1-215ENST00000549655 RETREG2Q8NC44 543 aa21.16■□□□□ 0.98
BRF1-215ENST00000549655 OR8K1Q8NGG5 319 aa21.16■□□□□ 0.98
BRF1-215ENST00000549655 PCMTD1Q96MG8 357 aaPredicted RBP21.16■□□□□ 0.98
BRF1-215ENST00000549655 ACAD9Q9H845 621 aa21.16■□□□□ 0.98
BRF1-215ENST00000549655 SAMM50Q9Y512 469 aa21.16■□□□□ 0.98
BRF1-215ENST00000549655 TUBB4AP04350 444 aa21.16■□□□□ 0.98
BRF1-215ENST00000549655 NR3C2P08235 984 aa21.16■□□□□ 0.98
BRF1-215ENST00000549655 ERCC3P19447 782 aa21.16■□□□□ 0.98
BRF1-215ENST00000549655 CCND2P30279 289 aa21.16■□□□□ 0.98
BRF1-215ENST00000549655 HOXD13P35453 343 aa21.16■□□□□ 0.98
BRF1-215ENST00000549655 IREB2P48200 963 aaKnown RBP21.16■□□□□ 0.98
BRF1-215ENST00000549655 CCDC40Q4G0X9 1142 aa21.16■□□□□ 0.98
BRF1-215ENST00000549655 TREML2Q5T2D2 321 aa21.16■□□□□ 0.98
BRF1-215ENST00000549655 VSIG10LQ86VR7 867 aa21.16■□□□□ 0.98
BRF1-215ENST00000549655 TTYH3Q9C0H2 523 aa21.16■□□□□ 0.98
BRF1-215ENST00000549655 ZSWIM4Q9H7M6 989 aa21.16■□□□□ 0.98
BRF1-215ENST00000549655 OLFML3Q9NRN5 406 aa21.16■□□□□ 0.98
BRF1-215ENST00000549655 KCND2Q9NZV8 630 aa21.16■□□□□ 0.98
BRF1-215ENST00000549655 OTOFQ9HC10 1997 aa21.15■□□□□ 0.98
BRF1-215ENST00000549655 PAPPA2Q9BXP8 1791 aa21.15■□□□□ 0.98
BRF1-215ENST00000549655 ATP9AO75110 1047 aa21.15■□□□□ 0.98
BRF1-215ENST00000549655 PRPF6O94906 941 aaKnown RBP21.15■□□□□ 0.98
BRF1-215ENST00000549655 GNA14O95837 355 aa21.15■□□□□ 0.98
BRF1-215ENST00000549655 ERVK-24P63145 666 aa21.15■□□□□ 0.98
BRF1-215ENST00000549655 CYP26C1Q6V0L0 522 aa21.15■□□□□ 0.98
BRF1-215ENST00000549655 SYT10Q6XYQ8 523 aa21.15■□□□□ 0.98
BRF1-215ENST00000549655 ZC3H3Q8IXZ2 948 aaKnown RBP21.15■□□□□ 0.98
BRF1-215ENST00000549655 MYCT1Q8N699 235 aa21.15■□□□□ 0.98
BRF1-215ENST00000549655 NSUN6Q8TEA1 469 aaKnown RBP21.15■□□□□ 0.98
BRF1-215ENST00000549655 DNAJC7Q99615 494 aa21.15■□□□□ 0.98
BRF1-215ENST00000549655 CYP39A1Q9NYL5 469 aa21.15■□□□□ 0.98
BRF1-215ENST00000549655 PTPRFP10586 1907 aa21.15■□□□□ 0.98
BRF1-215ENST00000549655 ARHGEF35A5YM69 484 aa21.14■□□□□ 0.98
BRF1-215ENST00000549655 GOLGA6L9A6NEM1 432 aa21.14■□□□□ 0.98
BRF1-215ENST00000549655 GCNT3O95395 438 aa21.14■□□□□ 0.98
BRF1-215ENST00000549655 CCDC175P0C221 793 aa21.14■□□□□ 0.98
BRF1-215ENST00000549655 GTF2F1P35269 517 aaKnown RBP eCLIP21.14■□□□□ 0.98
BRF1-215ENST00000549655 ADAM9Q13443 819 aa21.14■□□□□ 0.98
BRF1-215ENST00000549655 BMT2Q1RMZ1 405 aa21.14■□□□□ 0.98
BRF1-215ENST00000549655 PARVGQ9HBI0 331 aa21.14■□□□□ 0.98
BRF1-215ENST00000549655 A1CFQ9NQ94 594 aaKnown RBP21.14■□□□□ 0.98
BRF1-215ENST00000549655 TRAF3IP3Q9Y228 551 aa21.14■□□□□ 0.98
BRF1-215ENST00000549655 ADGRG1Q9Y653 693 aa21.14■□□□□ 0.98
BRF1-215ENST00000549655 ETF1P62495 437 aaKnown RBP21.14■□□□□ 0.97
BRF1-215ENST00000549655 TRIM65Q6PJ69 517 aa21.14■□□□□ 0.97
BRF1-215ENST00000549655 L3MBTL3Q96JM7 780 aaPredicted RBP21.14■□□□□ 0.97
BRF1-215ENST00000549655 ELP3Q9H9T3 547 aa21.14■□□□□ 0.97
BRF1-215ENST00000549655 AGPAT5Q9NUQ2 364 aa21.14■□□□□ 0.97
BRF1-215ENST00000549655 LOXHD1Q8IVV2 1947 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms