RNA–Protein interactions for RNA: ENST00000549358.5

TRAFD1-206, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 4

Gene TRAFD1, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-206ENST00000549358 STAG2Q8N3U4 1231 aa12.52□□□□□ -0.41
TRAFD1-206ENST00000549358 ZSCAN10Q96SZ4 725 aaPredicted RBP12.52□□□□□ -0.41
TRAFD1-206ENST00000549358 RTEL1Q9NZ71 1219 aa12.52□□□□□ -0.41
TRAFD1-206ENST00000549358 KMT2EQ8IZD2 1858 aa12.52□□□□□ -0.41
TRAFD1-206ENST00000549358 GCOM1H8Y6P7 765 aaPredicted RBP12.51□□□□□ -0.41
TRAFD1-206ENST00000549358 ZBTB5O15062 677 aa12.51□□□□□ -0.41
TRAFD1-206ENST00000549358 POLR2MP0CAP2 368 aa12.51□□□□□ -0.41
TRAFD1-206ENST00000549358 ATF7P17544 494 aaPredicted RBP12.51□□□□□ -0.41
TRAFD1-206ENST00000549358 MRPS9P82933 396 aaKnown RBP12.51□□□□□ -0.41
TRAFD1-206ENST00000549358 NMIQ13287 307 aaPredicted RBP12.51□□□□□ -0.41
TRAFD1-206ENST00000549358 FBXO47Q5MNV8 452 aa12.51□□□□□ -0.41
TRAFD1-206ENST00000549358 TAF2Q6P1X5 1199 aa12.51□□□□□ -0.41
TRAFD1-206ENST00000549358 TSHZ1Q6ZSZ6 1077 aa12.51□□□□□ -0.41
TRAFD1-206ENST00000549358 ZBTB33Q86T24 672 aa12.51□□□□□ -0.41
TRAFD1-206ENST00000549358 RSPH3Q86UC2 560 aa12.51□□□□□ -0.41
TRAFD1-206ENST00000549358 RTN4RL1Q86UN2 441 aaPredicted RBP12.51□□□□□ -0.41
TRAFD1-206ENST00000549358 CRIPAKQ8N1N5 446 aa12.51□□□□□ -0.41
TRAFD1-206ENST00000549358 SAMD3Q8N6K7 520 aa12.51□□□□□ -0.41
TRAFD1-206ENST00000549358 ENAHQ8N8S7 591 aaPredicted RBP12.51□□□□□ -0.41
TRAFD1-206ENST00000549358 DNAJB3Q8WWF6 145 aa12.51□□□□□ -0.41
TRAFD1-206ENST00000549358 RIPOR3Q96MK2 946 aa12.51□□□□□ -0.41
TRAFD1-206ENST00000549358 AGO3Q9H9G7 860 aaKnown RBP12.51□□□□□ -0.41
TRAFD1-206ENST00000549358 TRPC6Q9Y210 931 aa12.51□□□□□ -0.41
TRAFD1-206ENST00000549358 B4E1Z4 1266 aa12.5□□□□□ -0.41
TRAFD1-206ENST00000549358 KLRF2D3W0D1 207 aa12.5□□□□□ -0.41
TRAFD1-206ENST00000549358 CD52P31358 61 aa12.5□□□□□ -0.41
TRAFD1-206ENST00000549358 NUBP1P53384 320 aa12.5□□□□□ -0.41
TRAFD1-206ENST00000549358 HOMER1Q86YM7 354 aa12.5□□□□□ -0.41
TRAFD1-206ENST00000549358 VN1R2Q8NFZ6 395 aa12.5□□□□□ -0.41
TRAFD1-206ENST00000549358 LINC01599Q8WXQ3 324 aa12.5□□□□□ -0.41
TRAFD1-206ENST00000549358 SUSD6Q92537 303 aa12.5□□□□□ -0.41
TRAFD1-206ENST00000549358 ZSWIM5Q9P217 1185 aa12.5□□□□□ -0.41
TRAFD1-206ENST00000549358 CDY2AQ9Y6F7 541 aa12.5□□□□□ -0.41
TRAFD1-206ENST00000549358 SALL3Q9BXA9 1300 aa12.5□□□□□ -0.41
TRAFD1-206ENST00000549358 DMDP11532 3685 aa12.5□□□□□ -0.41
TRAFD1-206ENST00000549358 ZFHX2Q9C0A1 2572 aaPredicted RBP12.49□□□□□ -0.41
TRAFD1-206ENST00000549358 PRR23AA6NEV1 266 aa12.49□□□□□ -0.41
TRAFD1-206ENST00000549358 FIBPO43427 364 aa12.49□□□□□ -0.41
TRAFD1-206ENST00000549358 IBSPP21815 317 aaPredicted RBP12.49□□□□□ -0.41
TRAFD1-206ENST00000549358 SP100P23497 879 aaPredicted RBP12.49□□□□□ -0.41
TRAFD1-206ENST00000549358 GATMP50440 423 aa12.49□□□□□ -0.41
TRAFD1-206ENST00000549358 PPFIA1Q13136 1202 aa12.49□□□□□ -0.41
TRAFD1-206ENST00000549358 SEMA3FQ13275 785 aa12.49□□□□□ -0.41
TRAFD1-206ENST00000549358 ERMP1Q7Z2K6 904 aa12.49□□□□□ -0.41
TRAFD1-206ENST00000549358 NPAS4Q8IUM7 802 aa12.49□□□□□ -0.41
TRAFD1-206ENST00000549358 ATP8B4Q8TF62 1192 aa12.49□□□□□ -0.41
TRAFD1-206ENST00000549358 MTMR8Q96EF0 704 aa12.49□□□□□ -0.41
TRAFD1-206ENST00000549358 INPP4AQ96PE3 977 aaPredicted RBP12.49□□□□□ -0.41
TRAFD1-206ENST00000549358 NEK1Q96PY6 1258 aa12.49□□□□□ -0.41
TRAFD1-206ENST00000549358 APOL5Q9BWW9 433 aa12.49□□□□□ -0.41
TRAFD1-206ENST00000549358 ZBTB47Q9UFB7 747 aaPredicted RBP12.49□□□□□ -0.41
TRAFD1-206ENST00000549358 TUBE1Q9UJT0 475 aa12.49□□□□□ -0.41
TRAFD1-206ENST00000549358 PCDHB15Q9Y5E8 787 aa12.49□□□□□ -0.41
TRAFD1-206ENST00000549358 STAM2O75886 525 aa12.48□□□□□ -0.41
TRAFD1-206ENST00000549358 STAG3L1P0CL83 205 aa12.48□□□□□ -0.41
TRAFD1-206ENST00000549358 MARK3P27448 753 aa12.48□□□□□ -0.41
TRAFD1-206ENST00000549358 TCF7P36402 384 aaPredicted RBP12.48□□□□□ -0.41
TRAFD1-206ENST00000549358 NBL1P41271 181 aa12.48□□□□□ -0.41
TRAFD1-206ENST00000549358 ID4P47928 161 aa12.48□□□□□ -0.41
TRAFD1-206ENST00000549358 ERVFC1P60507 584 aa12.48□□□□□ -0.41
TRAFD1-206ENST00000549358 IGBP1P78318 339 aa12.48□□□□□ -0.41
TRAFD1-206ENST00000549358 GRIK4Q16099 956 aa12.48□□□□□ -0.41
TRAFD1-206ENST00000549358 MARCH8Q5T0T0 291 aa12.48□□□□□ -0.41
TRAFD1-206ENST00000549358 SPOUT1Q5T280 376 aaKnown RBP12.48□□□□□ -0.41
TRAFD1-206ENST00000549358 ANKRD45Q5TZF3 282 aa12.48□□□□□ -0.41
TRAFD1-206ENST00000549358 TMEM105Q8N8V8 129 aa12.48□□□□□ -0.41
TRAFD1-206ENST00000549358 KREMEN2Q8NCW0 462 aa12.48□□□□□ -0.41
TRAFD1-206ENST00000549358 ZBTB10Q96DT7 871 aa12.48□□□□□ -0.41
TRAFD1-206ENST00000549358 PIGSQ96S52 555 aa12.48□□□□□ -0.41
TRAFD1-206ENST00000549358 FTHL17Q9BXU8 183 aa12.48□□□□□ -0.41
TRAFD1-206ENST00000549358 TSHZ2Q9NRE2 1034 aa12.48□□□□□ -0.41
TRAFD1-206ENST00000549358 MAD2L2Q9UI95 211 aa12.48□□□□□ -0.41
TRAFD1-206ENST00000549358 LRFN2Q9ULH4 789 aa12.48□□□□□ -0.41
TRAFD1-206ENST00000549358 PCDHB12Q9Y5F1 795 aa12.48□□□□□ -0.41
TRAFD1-206ENST00000549358 SCG2P13521 617 aa12.47□□□□□ -0.41
TRAFD1-206ENST00000549358 TECP42680 631 aa12.47□□□□□ -0.41
TRAFD1-206ENST00000549358 NT5C2P49902 561 aa12.47□□□□□ -0.41
TRAFD1-206ENST00000549358 PDE1AP54750 535 aa12.47□□□□□ -0.41
TRAFD1-206ENST00000549358 MRPS6P82932 125 aaKnown RBP12.47□□□□□ -0.41
TRAFD1-206ENST00000549358 TMEM62Q0P6H9 643 aa12.47□□□□□ -0.41
TRAFD1-206ENST00000549358 TRAF1Q13077 416 aa12.47□□□□□ -0.41
TRAFD1-206ENST00000549358 DUSP6Q16828 381 aa12.47□□□□□ -0.41
TRAFD1-206ENST00000549358 IFIT1BQ5T764 474 aaKnown RBP12.47□□□□□ -0.41
TRAFD1-206ENST00000549358 IER5Q5VY09 327 aa12.47□□□□□ -0.41
TRAFD1-206ENST00000549358 UBAC1Q9BSL1 405 aa12.47□□□□□ -0.41
TRAFD1-206ENST00000549358 FAM49AQ9H0Q0 323 aaPredicted RBP12.47□□□□□ -0.41
TRAFD1-206ENST00000549358 S1PR5Q9H228 398 aa12.47□□□□□ -0.41
TRAFD1-206ENST00000549358 ERAP1Q9NZ08 941 aa12.47□□□□□ -0.41
TRAFD1-206ENST00000549358 PADI3Q9ULW8 664 aa12.47□□□□□ -0.41
TRAFD1-206ENST00000549358 MBLAC1A4D2B0 266 aaPredicted RBP12.46□□□□□ -0.41
TRAFD1-206ENST00000549358 PALM3A6NDB9 673 aaPredicted RBP12.46□□□□□ -0.41
TRAFD1-206ENST00000549358 FGF18O76093 207 aa12.46□□□□□ -0.41
TRAFD1-206ENST00000549358 SRGAP2BP0DMP2 458 aa12.46□□□□□ -0.41
TRAFD1-206ENST00000549358 MFAP1P55081 439 aaKnown RBP12.46□□□□□ -0.41
TRAFD1-206ENST00000549358 UBE3AQ05086 875 aa12.46□□□□□ -0.41
TRAFD1-206ENST00000549358 PAK2Q13177 524 aa12.46□□□□□ -0.41
TRAFD1-206ENST00000549358 MTMR3Q13615 1198 aa12.46□□□□□ -0.41
TRAFD1-206ENST00000549358 ANKRD54Q6NXT1 300 aa12.46□□□□□ -0.41
TRAFD1-206ENST00000549358 LLGL2Q6P1M3 1020 aa12.46□□□□□ -0.41
TRAFD1-206ENST00000549358 FRMD5Q7Z6J6 570 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms