RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 SLC12A7Q9Y666 1083 aa14.74□□□□□ -0.05
PTCH1-218ENST00000548945 SQORQ9Y6N5 450 aa14.74□□□□□ -0.05
PTCH1-218ENST00000548945 ADGRA3Q8IWK6 1321 aa14.73□□□□□ -0.05
PTCH1-218ENST00000548945 RBAK-RBAKDNI3L0D1 243 aa14.73□□□□□ -0.05
PTCH1-218ENST00000548945 SLC27A2O14975 620 aa14.73□□□□□ -0.05
PTCH1-218ENST00000548945 GHRP10912 638 aa14.73□□□□□ -0.05
PTCH1-218ENST00000548945 TCEAL5Q5H9L2 206 aa14.73□□□□□ -0.05
PTCH1-218ENST00000548945 FBXO47Q5MNV8 452 aa14.73□□□□□ -0.05
PTCH1-218ENST00000548945 MARCH8Q5T0T0 291 aa14.73□□□□□ -0.05
PTCH1-218ENST00000548945 TSHZ1Q6ZSZ6 1077 aa14.73□□□□□ -0.05
PTCH1-218ENST00000548945 FAM43BQ6ZT52 329 aaPredicted RBP14.73□□□□□ -0.05
PTCH1-218ENST00000548945 TMTC3Q6ZXV5 915 aa14.73□□□□□ -0.05
PTCH1-218ENST00000548945 JPH1Q9HDC5 661 aaPredicted RBP14.73□□□□□ -0.05
PTCH1-218ENST00000548945 C11orf16Q9NQ32 467 aa14.73□□□□□ -0.05
PTCH1-218ENST00000548945 PCDHA6Q9UN73 950 aa14.73□□□□□ -0.05
PTCH1-218ENST00000548945 PCDHA8Q9Y5H6 950 aa14.73□□□□□ -0.05
PTCH1-218ENST00000548945 ENPP3O14638 875 aa14.72□□□□□ -0.05
PTCH1-218ENST00000548945 LINC00271P0C7V0 271 aa14.72□□□□□ -0.05
PTCH1-218ENST00000548945 IL9P15248 144 aa14.72□□□□□ -0.05
PTCH1-218ENST00000548945 CTNNB1P35222 781 aa14.72□□□□□ -0.05
PTCH1-218ENST00000548945 BMPR1AP36894 532 aa14.72□□□□□ -0.05
PTCH1-218ENST00000548945 MRPS6P82932 125 aaKnown RBP14.72□□□□□ -0.05
PTCH1-218ENST00000548945 NECTIN1Q15223 517 aa14.72□□□□□ -0.05
PTCH1-218ENST00000548945 CREB3L3Q68CJ9 461 aa14.72□□□□□ -0.05
PTCH1-218ENST00000548945 CMTR1Q8N1G2 835 aaKnown RBP14.72□□□□□ -0.05
PTCH1-218ENST00000548945 ZNF689Q96CS4 500 aaPredicted RBP14.72□□□□□ -0.05
PTCH1-218ENST00000548945 ESYT1Q9BSJ8 1104 aa14.72□□□□□ -0.05
PTCH1-218ENST00000548945 PLVAPQ9BX97 442 aa14.72□□□□□ -0.05
PTCH1-218ENST00000548945 PRKAG3Q9UGI9 489 aa14.72□□□□□ -0.05
PTCH1-218ENST00000548945 CDY2AQ9Y6F7 541 aa14.72□□□□□ -0.05
PTCH1-218ENST00000548945 NFASCO94856 1347 aa14.71□□□□□ -0.05
PTCH1-218ENST00000548945 ALADP13716 330 aa14.71□□□□□ -0.05
PTCH1-218ENST00000548945 RXRAP19793 462 aa14.71□□□□□ -0.05
PTCH1-218ENST00000548945 MARK3P27448 753 aa14.71□□□□□ -0.05
PTCH1-218ENST00000548945 UBE2SQ16763 222 aa14.71□□□□□ -0.05
PTCH1-218ENST00000548945 IER5Q5VY09 327 aa14.71□□□□□ -0.05
PTCH1-218ENST00000548945 PPP1R18Q6NYC8 613 aa14.71□□□□□ -0.05
PTCH1-218ENST00000548945 PLPPR4Q7Z2D5 763 aa14.71□□□□□ -0.05
PTCH1-218ENST00000548945 DNAJB3Q8WWF6 145 aa14.71□□□□□ -0.05
PTCH1-218ENST00000548945 MXRA8Q9BRK3 442 aa14.71□□□□□ -0.05
PTCH1-218ENST00000548945 FTHL17Q9BXU8 183 aa14.71□□□□□ -0.05
PTCH1-218ENST00000548945 AZI2Q9H6S1 392 aa14.71□□□□□ -0.05
PTCH1-218ENST00000548945 KCNH7Q9NS40 1196 aa14.71□□□□□ -0.05
PTCH1-218ENST00000548945 SLC9A2Q9UBY0 812 aa14.71□□□□□ -0.05
PTCH1-218ENST00000548945 EVPLQ92817 2033 aa14.71□□□□□ -0.05
PTCH1-218ENST00000548945 KIAA1671Q9BY89 1806 aa14.71□□□□□ -0.06
PTCH1-218ENST00000548945 MYH9P35579 1960 aaKnown RBP14.71□□□□□ -0.06
PTCH1-218ENST00000548945 hCG_1642624A0A1W2PR95 340 aa14.7□□□□□ -0.06
PTCH1-218ENST00000548945 H3BQ06 376 aaPredicted RBP14.7□□□□□ -0.06
PTCH1-218ENST00000548945 hCG_1984214I3L0E3 225 aa14.7□□□□□ -0.06
PTCH1-218ENST00000548945 DGKIO75912 1065 aa14.7□□□□□ -0.06
PTCH1-218ENST00000548945 FOSP01100 380 aaPredicted RBP14.7□□□□□ -0.06
PTCH1-218ENST00000548945 INSRRP14616 1297 aa14.7□□□□□ -0.06
PTCH1-218ENST00000548945 SSTR3P32745 418 aaPredicted RBP14.7□□□□□ -0.06
PTCH1-218ENST00000548945 CTC1Q2NKJ3 1217 aa14.7□□□□□ -0.06
PTCH1-218ENST00000548945 SYNE3Q6ZMZ3 975 aa14.7□□□□□ -0.06
PTCH1-218ENST00000548945 HEATR3Q7Z4Q2 680 aa14.7□□□□□ -0.06
PTCH1-218ENST00000548945 ZNF713Q8N859 430 aaPredicted RBP14.7□□□□□ -0.06
PTCH1-218ENST00000548945 PCYT2Q99447 389 aa14.7□□□□□ -0.06
PTCH1-218ENST00000548945 SDF4Q9BRK5 362 aa14.7□□□□□ -0.06
PTCH1-218ENST00000548945 GLT8D2Q9H1C3 349 aa14.7□□□□□ -0.06
PTCH1-218ENST00000548945 RBM28Q9NW13 759 aaKnown RBP14.7□□□□□ -0.06
PTCH1-218ENST00000548945 PCDHA2Q9Y5H9 948 aa14.7□□□□□ -0.06
PTCH1-218ENST00000548945 KDM3AQ9Y4C1 1321 aa14.69□□□□□ -0.06
PTCH1-218ENST00000548945 PRR33A8MZF0 331 aa14.69□□□□□ -0.06
PTCH1-218ENST00000548945 M0QZ92 97 aa14.69□□□□□ -0.06
PTCH1-218ENST00000548945 HOXD11P31277 338 aaPredicted RBP14.69□□□□□ -0.06
PTCH1-218ENST00000548945 SLC26A2P50443 739 aa14.69□□□□□ -0.06
PTCH1-218ENST00000548945 COL9A3Q14050 684 aaPredicted RBP14.69□□□□□ -0.06
PTCH1-218ENST00000548945 BTG3Q14201 252 aaPredicted RBP14.69□□□□□ -0.06
PTCH1-218ENST00000548945 CEP55Q53EZ4 464 aa14.69□□□□□ -0.06
PTCH1-218ENST00000548945 NAALADL2Q58DX5 795 aa14.69□□□□□ -0.06
PTCH1-218ENST00000548945 RNF20Q5VTR2 975 aa14.69□□□□□ -0.06
PTCH1-218ENST00000548945 APOA5Q6Q788 366 aa14.69□□□□□ -0.06
PTCH1-218ENST00000548945 MICU3Q86XE3 530 aa14.69□□□□□ -0.06
PTCH1-218ENST00000548945 CMTR2Q8IYT2 770 aaKnown RBP14.69□□□□□ -0.06
PTCH1-218ENST00000548945 CRIPAKQ8N1N5 446 aa14.69□□□□□ -0.06
PTCH1-218ENST00000548945 NME8Q8N427 588 aa14.69□□□□□ -0.06
PTCH1-218ENST00000548945 CCDC82Q8N4S0 544 aa14.69□□□□□ -0.06
PTCH1-218ENST00000548945 P2RX5Q93086 422 aa14.69□□□□□ -0.06
PTCH1-218ENST00000548945 AGO3Q9H9G7 860 aaKnown RBP14.69□□□□□ -0.06
PTCH1-218ENST00000548945 RIC8AQ9NPQ8 531 aa14.69□□□□□ -0.06
PTCH1-218ENST00000548945 CLDND1Q9NY35 253 aa14.69□□□□□ -0.06
PTCH1-218ENST00000548945 PKD2L1Q9P0L9 805 aa14.69□□□□□ -0.06
PTCH1-218ENST00000548945 TRPV2Q9Y5S1 764 aa14.69□□□□□ -0.06
PTCH1-218ENST00000548945 WDFY4Q6ZS81 3184 aa14.69□□□□□ -0.06
PTCH1-218ENST00000548945 CNTNAP5Q8WYK1 1306 aa14.68□□□□□ -0.06
PTCH1-218ENST00000548945 IGSF9BQ9UPX0 1349 aa14.68□□□□□ -0.06
PTCH1-218ENST00000548945 GRM6O15303 877 aa14.68□□□□□ -0.06
PTCH1-218ENST00000548945 MMP1P03956 469 aa14.68□□□□□ -0.06
PTCH1-218ENST00000548945 CD52P31358 61 aa14.68□□□□□ -0.06
PTCH1-218ENST00000548945 LTBRP36941 435 aa14.68□□□□□ -0.06
PTCH1-218ENST00000548945 ACTR2P61160 394 aa14.68□□□□□ -0.06
PTCH1-218ENST00000548945 IGBP1P78318 339 aa14.68□□□□□ -0.06
PTCH1-218ENST00000548945 ZP2Q05996 745 aa14.68□□□□□ -0.06
PTCH1-218ENST00000548945 PLCB4Q15147 1175 aa14.68□□□□□ -0.06
PTCH1-218ENST00000548945 WWC2Q6AWC2 1192 aa14.68□□□□□ -0.06
PTCH1-218ENST00000548945 NPAS4Q8IUM7 802 aa14.68□□□□□ -0.06
PTCH1-218ENST00000548945 ADHFE1Q8IWW8 467 aa14.68□□□□□ -0.06
PTCH1-218ENST00000548945 LINC01599Q8WXQ3 324 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms