RNA–Protein interactions for RNA: ENST00000548498.5

SLC48A1-206, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 618 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-206ENST00000548498 ZNF654Q8IZM8 581 aa11.24□□□□□ -0.61
SLC48A1-206ENST00000548498 PBXIP1Q96AQ6 731 aa11.24□□□□□ -0.61
SLC48A1-206ENST00000548498 IL17RAQ96F46 866 aa11.24□□□□□ -0.61
SLC48A1-206ENST00000548498 CCDC136Q96JN2 1154 aa11.24□□□□□ -0.61
SLC48A1-206ENST00000548498 MSLNLQ96KJ4 702 aa11.24□□□□□ -0.61
SLC48A1-206ENST00000548498 PDCD2LQ9BRP1 358 aa11.24□□□□□ -0.61
SLC48A1-206ENST00000548498 C11orf84Q9BUA3 381 aaPredicted RBP11.24□□□□□ -0.61
SLC48A1-206ENST00000548498 LMAN2LQ9H0V9 348 aa11.24□□□□□ -0.61
SLC48A1-206ENST00000548498 RNPEPQ9H4A4 650 aa11.24□□□□□ -0.61
SLC48A1-206ENST00000548498 ANO2Q9NQ90 1003 aa11.24□□□□□ -0.61
SLC48A1-206ENST00000548498 WDR81Q562E7 1941 aa11.24□□□□□ -0.61
SLC48A1-206ENST00000548498 DCHS1Q96JQ0 3298 aa11.24□□□□□ -0.61
SLC48A1-206ENST00000548498 FRMPD4Q14CM0 1322 aa11.24□□□□□ -0.61
SLC48A1-206ENST00000548498 EVPLQ92817 2033 aa11.24□□□□□ -0.61
SLC48A1-206ENST00000548498 FAM186AA6NE01 2351 aa11.23□□□□□ -0.61
SLC48A1-206ENST00000548498 H3BRB1 525 aa11.23□□□□□ -0.61
SLC48A1-206ENST00000548498 NCK2O43639 380 aa11.23□□□□□ -0.61
SLC48A1-206ENST00000548498 GFRA3O60609 400 aa11.23□□□□□ -0.61
SLC48A1-206ENST00000548498 MMP1P03956 469 aa11.23□□□□□ -0.61
SLC48A1-206ENST00000548498 RB1P06400 928 aa11.23□□□□□ -0.61
SLC48A1-206ENST00000548498 CALM1P0DP23 149 aa11.23□□□□□ -0.61
SLC48A1-206ENST00000548498 CALM2P0DP24 149 aa11.23□□□□□ -0.61
SLC48A1-206ENST00000548498 CALM3P0DP25 149 aa11.23□□□□□ -0.61
SLC48A1-206ENST00000548498 DNAJB1P25685 340 aa11.23□□□□□ -0.61
SLC48A1-206ENST00000548498 KIF5BP33176 963 aa11.23□□□□□ -0.61
SLC48A1-206ENST00000548498 BMPR1AP36894 532 aa11.23□□□□□ -0.61
SLC48A1-206ENST00000548498 NDUFV1P49821 464 aa11.23□□□□□ -0.61
SLC48A1-206ENST00000548498 GNAQP50148 359 aa11.23□□□□□ -0.61
SLC48A1-206ENST00000548498 CACNB1Q02641 598 aaPredicted RBP11.23□□□□□ -0.61
SLC48A1-206ENST00000548498 ADAM15Q13444 863 aa11.23□□□□□ -0.61
SLC48A1-206ENST00000548498 KRT32Q14532 448 aa11.23□□□□□ -0.61
SLC48A1-206ENST00000548498 CASC1Q6TDU7 716 aa11.23□□□□□ -0.61
SLC48A1-206ENST00000548498 ADGRD2Q7Z7M1 963 aa11.23□□□□□ -0.61
SLC48A1-206ENST00000548498 TRIM50Q86XT4 487 aa11.23□□□□□ -0.61
SLC48A1-206ENST00000548498 TUT1Q9H6E5 874 aaKnown RBP11.23□□□□□ -0.61
SLC48A1-206ENST00000548498 SETD4Q9NVD3 440 aa11.23□□□□□ -0.61
SLC48A1-206ENST00000548498 TELO2Q9Y4R8 837 aa11.23□□□□□ -0.61
SLC48A1-206ENST00000548498 PCDHA1Q9Y5I3 950 aa11.23□□□□□ -0.61
SLC48A1-206ENST00000548498 VPS13AQ96RL7 3174 aa11.23□□□□□ -0.61
SLC48A1-206ENST00000548498 DENND4AQ7Z401 1863 aa11.23□□□□□ -0.61
SLC48A1-206ENST00000548498 DMDP11532 3685 aa11.22□□□□□ -0.61
SLC48A1-206ENST00000548498 LOC730098B7Z3J9 87 aa11.22□□□□□ -0.61
SLC48A1-206ENST00000548498 PIK3CDO00329 1044 aa11.22□□□□□ -0.61
SLC48A1-206ENST00000548498 DHX16O60231 1041 aaKnown RBP11.22□□□□□ -0.61
SLC48A1-206ENST00000548498 CAND2O75155 1236 aa11.22□□□□□ -0.61
SLC48A1-206ENST00000548498 GLP2RO95838 553 aa11.22□□□□□ -0.61
SLC48A1-206ENST00000548498 HMGB1P09429 215 aaKnown RBP11.22□□□□□ -0.61
SLC48A1-206ENST00000548498 HOXA13P31271 388 aaPredicted RBP11.22□□□□□ -0.61
SLC48A1-206ENST00000548498 ZXDAP98168 799 aa11.22□□□□□ -0.61
SLC48A1-206ENST00000548498 PGM5Q15124 567 aa11.22□□□□□ -0.61
SLC48A1-206ENST00000548498 DHX32Q7L7V1 743 aaKnown RBP11.22□□□□□ -0.61
SLC48A1-206ENST00000548498 VSIG10LQ86VR7 867 aa11.22□□□□□ -0.61
SLC48A1-206ENST00000548498 SUGP1Q8IWZ8 645 aaKnown RBP11.22□□□□□ -0.61
SLC48A1-206ENST00000548498 RASEFQ8IZ41 740 aa11.22□□□□□ -0.61
SLC48A1-206ENST00000548498 FBXL6Q8N531 539 aa11.22□□□□□ -0.61
SLC48A1-206ENST00000548498 APBB2Q92870 758 aa11.22□□□□□ -0.61
SLC48A1-206ENST00000548498 CLP1Q92989 425 aaKnown RBP11.22□□□□□ -0.61
SLC48A1-206ENST00000548498 PIGSQ96S52 555 aa11.22□□□□□ -0.61
SLC48A1-206ENST00000548498 AGXT2Q9BYV1 514 aa11.22□□□□□ -0.61
SLC48A1-206ENST00000548498 VAT1LQ9HCJ6 419 aa11.22□□□□□ -0.61
SLC48A1-206ENST00000548498 CLEC1BQ9P126 229 aa11.22□□□□□ -0.61
SLC48A1-206ENST00000548498 NID2Q14112 1375 aa11.21□□□□□ -0.61
SLC48A1-206ENST00000548498 EYA4O95677 639 aa11.21□□□□□ -0.61
SLC48A1-206ENST00000548498 CHRNA1P02708 482 aa11.21□□□□□ -0.61
SLC48A1-206ENST00000548498 GHRP10912 638 aa11.21□□□□□ -0.61
SLC48A1-206ENST00000548498 HSPA4P34932 840 aa11.21□□□□□ -0.61
SLC48A1-206ENST00000548498 ADAM17P78536 824 aa11.21□□□□□ -0.61
SLC48A1-206ENST00000548498 FUT2Q10981 343 aa11.21□□□□□ -0.61
SLC48A1-206ENST00000548498 FAM26DQ5JW98 314 aa11.21□□□□□ -0.61
SLC48A1-206ENST00000548498 TMTC3Q6ZXV5 915 aa11.21□□□□□ -0.61
SLC48A1-206ENST00000548498 SMRP1Q8NCR6 262 aa11.21□□□□□ -0.61
SLC48A1-206ENST00000548498 CTCFLQ8NI51 663 aaPredicted RBP11.21□□□□□ -0.61
SLC48A1-206ENST00000548498 LMBR1Q8WVP7 490 aa11.21□□□□□ -0.61
SLC48A1-206ENST00000548498 ZNF689Q96CS4 500 aaPredicted RBP11.21□□□□□ -0.61
SLC48A1-206ENST00000548498 NEK1Q96PY6 1258 aa11.21□□□□□ -0.61
SLC48A1-206ENST00000548498 MLXIPQ9HAP2 919 aa11.21□□□□□ -0.61
SLC48A1-206ENST00000548498 BARX2Q9UMQ3 279 aaPredicted RBP11.21□□□□□ -0.61
SLC48A1-206ENST00000548498 RWDD3Q9Y3V2 267 aa11.21□□□□□ -0.61
SLC48A1-206ENST00000548498 USP15Q9Y4E8 981 aaPredicted RBP11.21□□□□□ -0.61
SLC48A1-206ENST00000548498 PCDHGC5Q9Y5F6 944 aa11.21□□□□□ -0.61
SLC48A1-206ENST00000548498 RIF1Q5UIP0 2472 aaKnown RBP11.2□□□□□ -0.62
SLC48A1-206ENST00000548498 STAM2O75886 525 aa11.2□□□□□ -0.62
SLC48A1-206ENST00000548498 ITGB1P05556 798 aa11.2□□□□□ -0.62
SLC48A1-206ENST00000548498 TGFB3P10600 412 aa11.2□□□□□ -0.62
SLC48A1-206ENST00000548498 EVCP57679 992 aa11.2□□□□□ -0.62
SLC48A1-206ENST00000548498 MGAT3Q09327 533 aa11.2□□□□□ -0.62
SLC48A1-206ENST00000548498 BTG3Q14201 252 aaPredicted RBP11.2□□□□□ -0.62
SLC48A1-206ENST00000548498 LPIN1Q14693 890 aa11.2□□□□□ -0.62
SLC48A1-206ENST00000548498 CBX2Q14781 532 aaPredicted RBP11.2□□□□□ -0.62
SLC48A1-206ENST00000548498 XRRA1Q6P2D8 792 aa11.2□□□□□ -0.62
SLC48A1-206ENST00000548498 KCNV1Q6PIU1 500 aa11.2□□□□□ -0.62
SLC48A1-206ENST00000548498 APOA5Q6Q788 366 aa11.2□□□□□ -0.62
SLC48A1-206ENST00000548498 RUFY4Q6ZNE9 571 aa11.2□□□□□ -0.62
SLC48A1-206ENST00000548498 SRBD1Q8N5C6 995 aaKnown RBP11.2□□□□□ -0.62
SLC48A1-206ENST00000548498 FANCBQ8NB91 859 aa11.2□□□□□ -0.62
SLC48A1-206ENST00000548498 LINC01599Q8WXQ3 324 aa11.2□□□□□ -0.62
SLC48A1-206ENST00000548498 ASIC4Q96FT7 647 aa11.2□□□□□ -0.62
SLC48A1-206ENST00000548498 INPP4AQ96PE3 977 aaPredicted RBP11.2□□□□□ -0.62
SLC48A1-206ENST00000548498 PRRX2Q99811 253 aa11.2□□□□□ -0.62
SLC48A1-206ENST00000548498 PLAGL2Q9UPG8 496 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms