RNA–Protein interactions for RNA: ENST00000547758.1

CCDC59-202, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-202ENST00000547758 PDE1AP54750 535 aa15.61■□□□□ 0.09
CCDC59-202ENST00000547758 COASYQ13057 564 aa15.61■□□□□ 0.09
CCDC59-202ENST00000547758 NEDD9Q14511 834 aa15.61■□□□□ 0.09
CCDC59-202ENST00000547758 CBX2Q14781 532 aaPredicted RBP15.61■□□□□ 0.09
CCDC59-202ENST00000547758 GNPTABQ3T906 1256 aa15.61■□□□□ 0.09
CCDC59-202ENST00000547758 CYFIP1Q7L576 1253 aa15.61■□□□□ 0.09
CCDC59-202ENST00000547758 STAG2Q8N3U4 1231 aa15.61■□□□□ 0.09
CCDC59-202ENST00000547758 EFHBQ8N7U6 833 aa15.61■□□□□ 0.09
CCDC59-202ENST00000547758 P2RX5Q93086 422 aa15.61■□□□□ 0.09
CCDC59-202ENST00000547758 MTMR8Q96EF0 704 aa15.61■□□□□ 0.09
CCDC59-202ENST00000547758 GPR20Q99678 358 aa15.61■□□□□ 0.09
CCDC59-202ENST00000547758 EHMT1Q9H9B1 1298 aa15.61■□□□□ 0.09
CCDC59-202ENST00000547758 CLEC1BQ9P126 229 aa15.61■□□□□ 0.09
CCDC59-202ENST00000547758 RIF1Q5UIP0 2472 aaKnown RBP15.61■□□□□ 0.09
CCDC59-202ENST00000547758 FAM186AA6NE01 2351 aa15.61■□□□□ 0.09
CCDC59-202ENST00000547758 GCOM1H8Y6P7 765 aaPredicted RBP15.6■□□□□ 0.09
CCDC59-202ENST00000547758 ENPP3O14638 875 aa15.6■□□□□ 0.09
CCDC59-202ENST00000547758 ZBTB5O15062 677 aa15.6■□□□□ 0.09
CCDC59-202ENST00000547758 DGKIO75912 1065 aa15.6■□□□□ 0.09
CCDC59-202ENST00000547758 POLR2MP0CAP2 368 aa15.6■□□□□ 0.09
CCDC59-202ENST00000547758 DNAJB1P25685 340 aa15.6■□□□□ 0.09
CCDC59-202ENST00000547758 ICAM3P32942 547 aa15.6■□□□□ 0.09
CCDC59-202ENST00000547758 MFAP1P55081 439 aaKnown RBP15.6■□□□□ 0.09
CCDC59-202ENST00000547758 RRP1P56182 461 aaKnown RBP15.6■□□□□ 0.09
CCDC59-202ENST00000547758 MGAT3Q09327 533 aa15.6■□□□□ 0.09
CCDC59-202ENST00000547758 LPIN1Q14693 890 aa15.6■□□□□ 0.09
CCDC59-202ENST00000547758 ADGRD2Q7Z7M1 963 aa15.6■□□□□ 0.09
CCDC59-202ENST00000547758 FCHSD1Q86WN1 690 aa15.6■□□□□ 0.09
CCDC59-202ENST00000547758 FAM86C1Q9NVL1 165 aa15.6■□□□□ 0.09
CCDC59-202ENST00000547758 CIZ1Q9ULV3 898 aaPredicted RBP15.6■□□□□ 0.09
CCDC59-202ENST00000547758 SUPT16HQ9Y5B9 1047 aaKnown RBP15.6■□□□□ 0.09
CCDC59-202ENST00000547758 MRPL42Q9Y6G3 142 aaKnown RBP15.6■□□□□ 0.09
CCDC59-202ENST00000547758 FNDC1Q4ZHG4 1894 aaPredicted RBP15.6■□□□□ 0.09
CCDC59-202ENST00000547758 NRCAMQ92823 1304 aa15.6■□□□□ 0.09
CCDC59-202ENST00000547758 MYO10Q9HD67 2058 aa15.59■□□□□ 0.09
CCDC59-202ENST00000547758 KLRF2D3W0D1 207 aa15.59■□□□□ 0.09
CCDC59-202ENST00000547758 ITGB1P05556 798 aa15.59■□□□□ 0.09
CCDC59-202ENST00000547758 SIGLEC14Q08ET2 396 aa15.59■□□□□ 0.09
CCDC59-202ENST00000547758 SEMA3FQ13275 785 aa15.59■□□□□ 0.09
CCDC59-202ENST00000547758 NAALADL2Q58DX5 795 aa15.59■□□□□ 0.09
CCDC59-202ENST00000547758 UTP14CQ5TAP6 766 aaKnown RBP15.59■□□□□ 0.09
CCDC59-202ENST00000547758 ANKRD45Q5TZF3 282 aa15.59■□□□□ 0.09
CCDC59-202ENST00000547758 TAF2Q6P1X5 1199 aa15.59■□□□□ 0.09
CCDC59-202ENST00000547758 RUFY4Q6ZNE9 571 aa15.59■□□□□ 0.09
CCDC59-202ENST00000547758 INPP4AQ96PE3 977 aaPredicted RBP15.59■□□□□ 0.09
CCDC59-202ENST00000547758 ZSWIM5Q9P217 1185 aa15.59■□□□□ 0.09
CCDC59-202ENST00000547758 USP15Q9Y4E8 981 aaPredicted RBP15.59■□□□□ 0.09
CCDC59-202ENST00000547758 FRMPD4Q14CM0 1322 aa15.59■□□□□ 0.09
CCDC59-202ENST00000547758 SPATA31C2B4DYI2 1134 aa15.58■□□□□ 0.08
CCDC59-202ENST00000547758 STAM2O75886 525 aa15.58■□□□□ 0.08
CCDC59-202ENST00000547758 GLP2RO95838 553 aa15.58■□□□□ 0.08
CCDC59-202ENST00000547758 NRIP1P48552 1158 aa15.58■□□□□ 0.08
CCDC59-202ENST00000547758 VCPP55072 806 aaKnown RBP15.58■□□□□ 0.08
CCDC59-202ENST00000547758 MRPS9P82933 396 aaKnown RBP15.58■□□□□ 0.08
CCDC59-202ENST00000547758 FBXO47Q5MNV8 452 aa15.58■□□□□ 0.08
CCDC59-202ENST00000547758 IFIT1BQ5T764 474 aaKnown RBP15.58■□□□□ 0.08
CCDC59-202ENST00000547758 RSPH3Q86UC2 560 aa15.58■□□□□ 0.08
CCDC59-202ENST00000547758 HOMER1Q86YM7 354 aa15.58■□□□□ 0.08
CCDC59-202ENST00000547758 CMTR2Q8IYT2 770 aaKnown RBP15.58■□□□□ 0.08
CCDC59-202ENST00000547758 SPPL3Q8TCT6 385 aa15.58■□□□□ 0.08
CCDC59-202ENST00000547758 UBAC1Q9BSL1 405 aa15.58■□□□□ 0.08
CCDC59-202ENST00000547758 PHF7Q9BWX1 381 aaPredicted RBP15.58■□□□□ 0.08
CCDC59-202ENST00000547758 IRF2BPLQ9H1B7 796 aa15.58■□□□□ 0.08
CCDC59-202ENST00000547758 MAD2L2Q9UI95 211 aa15.58■□□□□ 0.08
CCDC59-202ENST00000547758 BARX2Q9UMQ3 279 aaPredicted RBP15.58■□□□□ 0.08
CCDC59-202ENST00000547758 TELO2Q9Y4R8 837 aa15.58■□□□□ 0.08
CCDC59-202ENST00000547758 FIBPO43427 364 aa15.57■□□□□ 0.08
CCDC59-202ENST00000547758 SP4Q02446 784 aa15.57■□□□□ 0.08
CCDC59-202ENST00000547758 TRAF1Q13077 416 aa15.57■□□□□ 0.08
CCDC59-202ENST00000547758 TSHZ1Q6ZSZ6 1077 aa15.57■□□□□ 0.08
CCDC59-202ENST00000547758 RBM23Q86U06 439 aaKnown RBP15.57■□□□□ 0.08
CCDC59-202ENST00000547758 KLHL23Q8NBE8 558 aa15.57■□□□□ 0.08
CCDC59-202ENST00000547758 POF1BQ8WVV4 589 aa15.57■□□□□ 0.08
CCDC59-202ENST00000547758 LINC01599Q8WXQ3 324 aa15.57■□□□□ 0.08
CCDC59-202ENST00000547758 ASIC4Q96FT7 647 aa15.57■□□□□ 0.08
CCDC59-202ENST00000547758 FOXK2Q01167 660 aa15.56■□□□□ 0.08
CCDC59-202ENST00000547758 ATOH1Q92858 354 aaPredicted RBP15.56■□□□□ 0.08
CCDC59-202ENST00000547758 RILPL2Q969X0 211 aa15.56■□□□□ 0.08
CCDC59-202ENST00000547758 RPGRIP1Q96KN7 1286 aa15.56■□□□□ 0.08
CCDC59-202ENST00000547758 RTEL1Q9NZ71 1219 aa15.56■□□□□ 0.08
CCDC59-202ENST00000547758 TUBE1Q9UJT0 475 aa15.56■□□□□ 0.08
CCDC59-202ENST00000547758 CDY2AQ9Y6F7 541 aa15.56■□□□□ 0.08
CCDC59-202ENST00000547758 VPS13AQ96RL7 3174 aa15.55■□□□□ 0.08
CCDC59-202ENST00000547758 PALM3A6NDB9 673 aaPredicted RBP15.55■□□□□ 0.08
CCDC59-202ENST00000547758 AVPR2P30518 371 aa15.55■□□□□ 0.08
CCDC59-202ENST00000547758 CD52P31358 61 aa15.55■□□□□ 0.08
CCDC59-202ENST00000547758 PPFIA1Q13136 1202 aa15.55■□□□□ 0.08
CCDC59-202ENST00000547758 SLC35G1Q2M3R5 365 aa15.55■□□□□ 0.08
CCDC59-202ENST00000547758 PAN2Q504Q3 1202 aaKnown RBP15.55■□□□□ 0.08
CCDC59-202ENST00000547758 NPAS4Q8IUM7 802 aa15.55■□□□□ 0.08
CCDC59-202ENST00000547758 CRIPAKQ8N1N5 446 aa15.55■□□□□ 0.08
CCDC59-202ENST00000547758 DNAJB3Q8WWF6 145 aa15.55■□□□□ 0.08
CCDC59-202ENST00000547758 PIGSQ96S52 555 aa15.55■□□□□ 0.08
CCDC59-202ENST00000547758 SENP7Q9BQF6 1050 aa15.55■□□□□ 0.08
CCDC59-202ENST00000547758 KRT23Q9C075 422 aa15.55■□□□□ 0.08
CCDC59-202ENST00000547758 AGO3Q9H9G7 860 aaKnown RBP15.55■□□□□ 0.08
CCDC59-202ENST00000547758 PCDHGC5Q9Y5F6 944 aa15.55■□□□□ 0.08
CCDC59-202ENST00000547758 DCHS1Q96JQ0 3298 aa15.55■□□□□ 0.08
CCDC59-202ENST00000547758 MBLAC1A4D2B0 266 aaPredicted RBP15.54■□□□□ 0.08
CCDC59-202ENST00000547758 ATF7P17544 494 aaPredicted RBP15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms