RNA–Protein interactions for RNA: ENST00000547687.1

CHMP1A-204, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 1 (best)

Gene CHMP1A, Length 2,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-204ENST00000547687 NYAP1Q6ZVC0 841 aa18.44■□□□□ 0.54
CHMP1A-204ENST00000547687 ADSSL1Q8N142 457 aa18.44■□□□□ 0.54
CHMP1A-204ENST00000547687 C7orf25Q9BPX7 421 aa18.44■□□□□ 0.54
CHMP1A-204ENST00000547687 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.44■□□□□ 0.54
CHMP1A-204ENST00000547687 ADD3Q9UEY8 706 aaKnown RBP18.44■□□□□ 0.54
CHMP1A-204ENST00000547687 RIPK3Q9Y572 518 aa18.44■□□□□ 0.54
CHMP1A-204ENST00000547687 RANBP2P49792 3224 aaKnown RBP18.44■□□□□ 0.54
CHMP1A-204ENST00000547687 TEX33O43247 280 aa18.44■□□□□ 0.54
CHMP1A-204ENST00000547687 XRCC5P13010 732 aaKnown RBP18.44■□□□□ 0.54
CHMP1A-204ENST00000547687 STAT3P40763 770 aa18.44■□□□□ 0.54
CHMP1A-204ENST00000547687 HSD17B4P51659 736 aa18.44■□□□□ 0.54
CHMP1A-204ENST00000547687 CACNB2Q08289 660 aaPredicted RBP18.44■□□□□ 0.54
CHMP1A-204ENST00000547687 PRR16Q569H4 304 aa18.44■□□□□ 0.54
CHMP1A-204ENST00000547687 CCDC47Q96A33 483 aaKnown RBP18.44■□□□□ 0.54
CHMP1A-204ENST00000547687 MCM3APO60318 1980 aa18.43■□□□□ 0.54
CHMP1A-204ENST00000547687 POTEMA6NI47 508 aa18.43■□□□□ 0.54
CHMP1A-204ENST00000547687 PGK2P07205 417 aa18.43■□□□□ 0.54
CHMP1A-204ENST00000547687 CYP3A4P08684 503 aa18.43■□□□□ 0.54
CHMP1A-204ENST00000547687 CIITAP33076 1130 aa18.43■□□□□ 0.54
CHMP1A-204ENST00000547687 SNRNP48Q6IEG0 339 aaKnown RBP18.43■□□□□ 0.54
CHMP1A-204ENST00000547687 DPP9Q86TI2 863 aa18.43■□□□□ 0.54
CHMP1A-204ENST00000547687 GIMAP8Q8ND71 665 aaPredicted RBP18.43■□□□□ 0.54
CHMP1A-204ENST00000547687 CYP2W1Q8TAV3 490 aa18.43■□□□□ 0.54
CHMP1A-204ENST00000547687 LENG9Q96B70 501 aa18.43■□□□□ 0.54
CHMP1A-204ENST00000547687 TRIM9Q9C026 710 aa18.43■□□□□ 0.54
CHMP1A-204ENST00000547687 KCNMB3Q9NPA1 279 aa18.43■□□□□ 0.54
CHMP1A-204ENST00000547687 PAK6Q9NQU5 681 aaPredicted RBP18.43■□□□□ 0.54
CHMP1A-204ENST00000547687 LIMA1Q9UHB6 759 aaKnown RBP18.43■□□□□ 0.54
CHMP1A-204ENST00000547687 PAXBP1Q9Y5B6 917 aa18.43■□□□□ 0.54
CHMP1A-204ENST00000547687 ZNF236Q9UL36 1845 aa18.43■□□□□ 0.54
CHMP1A-204ENST00000547687 RIOK3O14730 519 aaKnown RBP18.42■□□□□ 0.54
CHMP1A-204ENST00000547687 SGPL1O95470 568 aa18.42■□□□□ 0.54
CHMP1A-204ENST00000547687 CCND3P30281 292 aaPredicted RBP18.42■□□□□ 0.54
CHMP1A-204ENST00000547687 GTF2F1P35269 517 aaKnown RBP eCLIP18.42■□□□□ 0.54
CHMP1A-204ENST00000547687 SPAG1Q07617 926 aa18.42■□□□□ 0.54
CHMP1A-204ENST00000547687 GRB10Q13322 594 aa18.42■□□□□ 0.54
CHMP1A-204ENST00000547687 STIM1Q13586 685 aa18.42■□□□□ 0.54
CHMP1A-204ENST00000547687 Q4G0T1 1027 aa18.42■□□□□ 0.54
CHMP1A-204ENST00000547687 MCF2L2Q86YR7 1114 aa18.42■□□□□ 0.54
CHMP1A-204ENST00000547687 COL20A1Q9P218 1284 aa18.42■□□□□ 0.54
CHMP1A-204ENST00000547687 PCDHA12Q9UN75 941 aa18.42■□□□□ 0.54
CHMP1A-204ENST00000547687 FRMPD3Q5JV73 1810 aa18.42■□□□□ 0.54
CHMP1A-204ENST00000547687 LRRC10BA6NIK2 292 aa18.42■□□□□ 0.54
CHMP1A-204ENST00000547687 TFRCP02786 760 aaKnown RBP18.42■□□□□ 0.54
CHMP1A-204ENST00000547687 CYP2C19P33261 490 aa18.42■□□□□ 0.54
CHMP1A-204ENST00000547687 SV2BQ7L1I2 683 aa18.42■□□□□ 0.54
CHMP1A-204ENST00000547687 SHCBP1Q8NEM2 672 aa18.42■□□□□ 0.54
CHMP1A-204ENST00000547687 CDK5RAP3Q96JB5 506 aa18.42■□□□□ 0.54
CHMP1A-204ENST00000547687 TRERF1Q96PN7 1200 aa18.42■□□□□ 0.54
CHMP1A-204ENST00000547687 PNMA5Q96PV4 448 aa18.42■□□□□ 0.54
CHMP1A-204ENST00000547687 HMX1Q9NP08 348 aaPredicted RBP18.42■□□□□ 0.54
CHMP1A-204ENST00000547687 STK17AQ9UEE5 414 aa18.42■□□□□ 0.54
CHMP1A-204ENST00000547687 PNMA2Q9UL42 364 aa18.42■□□□□ 0.54
CHMP1A-204ENST00000547687 RPTORQ8N122 1335 aa18.41■□□□□ 0.54
CHMP1A-204ENST00000547687 ZNF76P36508 570 aa18.41■□□□□ 0.54
CHMP1A-204ENST00000547687 ADKP55263 362 aaKnown RBP18.41■□□□□ 0.54
CHMP1A-204ENST00000547687 ASIC1P78348 528 aa18.41■□□□□ 0.54
CHMP1A-204ENST00000547687 KRT31Q15323 416 aa18.41■□□□□ 0.54
CHMP1A-204ENST00000547687 KRT79Q5XKE5 535 aa18.41■□□□□ 0.54
CHMP1A-204ENST00000547687 RIOX2Q8IUF8 465 aa18.41■□□□□ 0.54
CHMP1A-204ENST00000547687 TC2NQ8N9U0 490 aa18.41■□□□□ 0.54
CHMP1A-204ENST00000547687 ANKRD20A12PQ8NF67 263 aa18.41■□□□□ 0.54
CHMP1A-204ENST00000547687 ETNPPLQ8TBG4 499 aa18.41■□□□□ 0.54
CHMP1A-204ENST00000547687 ZNF592Q92610 1267 aa18.41■□□□□ 0.54
CHMP1A-204ENST00000547687 PPP1R13BQ96KQ4 1090 aa18.41■□□□□ 0.54
CHMP1A-204ENST00000547687 MROH8Q9H579 483 aa18.41■□□□□ 0.54
CHMP1A-204ENST00000547687 EXOC1Q9NV70 894 aa18.41■□□□□ 0.54
CHMP1A-204ENST00000547687 PSMA7O14818 248 aa18.4■□□□□ 0.54
CHMP1A-204ENST00000547687 CCP110O43303 1012 aa18.4■□□□□ 0.54
CHMP1A-204ENST00000547687 PBX1P40424 430 aa18.4■□□□□ 0.54
CHMP1A-204ENST00000547687 GHRHRQ02643 423 aa18.4■□□□□ 0.54
CHMP1A-204ENST00000547687 PDE4DQ08499 809 aa18.4■□□□□ 0.54
CHMP1A-204ENST00000547687 TCP11X2Q5H9J9 407 aa18.4■□□□□ 0.54
CHMP1A-204ENST00000547687 MAP3K21Q5TCX8 1036 aa18.4■□□□□ 0.54
CHMP1A-204ENST00000547687 MMP19Q99542 508 aa18.4■□□□□ 0.54
CHMP1A-204ENST00000547687 BAG1Q99933 345 aaPredicted RBP18.4■□□□□ 0.54
CHMP1A-204ENST00000547687 GTPBP4Q9BZE4 634 aaKnown RBP18.4■□□□□ 0.54
CHMP1A-204ENST00000547687 EHMT1Q9H9B1 1298 aa18.4■□□□□ 0.54
CHMP1A-204ENST00000547687 KCNJ18B7U540 433 aa18.4■□□□□ 0.54
CHMP1A-204ENST00000547687 FCER1AP12319 257 aa18.4■□□□□ 0.54
CHMP1A-204ENST00000547687 OAZ1P54368 228 aa18.4■□□□□ 0.54
CHMP1A-204ENST00000547687 KCNJ12Q14500 433 aa18.4■□□□□ 0.54
CHMP1A-204ENST00000547687 TMEM139Q8IV31 216 aa18.4■□□□□ 0.54
CHMP1A-204ENST00000547687 SLFN12Q8IYM2 578 aa18.4■□□□□ 0.54
CHMP1A-204ENST00000547687 SNX29Q8TEQ0 813 aa18.4■□□□□ 0.54
CHMP1A-204ENST00000547687 DIS3LQ8TF46 1054 aaKnown RBP18.4■□□□□ 0.54
CHMP1A-204ENST00000547687 DHTKD1Q96HY7 919 aaPredicted RBP18.4■□□□□ 0.54
CHMP1A-204ENST00000547687 ZFP91Q96JP5 570 aaPredicted RBP18.4■□□□□ 0.54
CHMP1A-204ENST00000547687 RNF146Q9NTX7 359 aa18.4■□□□□ 0.54
CHMP1A-204ENST00000547687 BLOC1S4Q9NUP1 217 aa18.4■□□□□ 0.54
CHMP1A-204ENST00000547687 IGLV3-22A0A075B6J6 115 aa18.39■□□□□ 0.53
CHMP1A-204ENST00000547687 AKR1B15C9JRZ8 316 aaPredicted RBP18.39■□□□□ 0.53
CHMP1A-204ENST00000547687 KIF2AO00139 706 aaPredicted RBP18.39■□□□□ 0.53
CHMP1A-204ENST00000547687 N4BP3O15049 544 aa18.39■□□□□ 0.53
CHMP1A-204ENST00000547687 TBX3O15119 743 aa18.39■□□□□ 0.53
CHMP1A-204ENST00000547687 ARHGAP6O43182 974 aa18.39■□□□□ 0.53
CHMP1A-204ENST00000547687 STRNO43815 780 aa18.39■□□□□ 0.53
CHMP1A-204ENST00000547687 SLC25A27O95847 323 aa18.39■□□□□ 0.53
CHMP1A-204ENST00000547687 CCT6AP40227 531 aaKnown RBP18.39■□□□□ 0.53
CHMP1A-204ENST00000547687 RPS6P62753 249 aaKnown RBP18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms