RNA–Protein interactions for RNA: ENST00000547338.5

RBFOX1-207, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-207ENST00000547338 TTC12Q9H892 705 aaPredicted RBP19.39■□□□□ 0.69
RBFOX1-207ENST00000547338 PCDHB6Q9Y5E3 794 aa19.39■□□□□ 0.69
RBFOX1-207ENST00000547338 SOX1O00570 391 aaPredicted RBP19.38■□□□□ 0.69
RBFOX1-207ENST00000547338 CD4P01730 458 aa19.38■□□□□ 0.69
RBFOX1-207ENST00000547338 NLRP5P59047 1200 aa19.38■□□□□ 0.69
RBFOX1-207ENST00000547338 ARL6IP4Q66PJ3 421 aaKnown RBP19.38■□□□□ 0.69
RBFOX1-207ENST00000547338 CCDC186Q7Z3E2 898 aa19.38■□□□□ 0.69
RBFOX1-207ENST00000547338 AOPEPQ8N6M6 819 aa19.38■□□□□ 0.69
RBFOX1-207ENST00000547338 MLKLQ8NB16 471 aa19.38■□□□□ 0.69
RBFOX1-207ENST00000547338 OXER1Q8TDS5 423 aa19.38■□□□□ 0.69
RBFOX1-207ENST00000547338 CCDC12Q8WUD4 166 aaPredicted RBP19.38■□□□□ 0.69
RBFOX1-207ENST00000547338 BADQ92934 168 aa19.38■□□□□ 0.69
RBFOX1-207ENST00000547338 CLIC6Q96NY7 704 aa19.38■□□□□ 0.69
RBFOX1-207ENST00000547338 CBFA2T2O43439 604 aa19.37■□□□□ 0.69
RBFOX1-207ENST00000547338 CABYRO75952 493 aa19.37■□□□□ 0.69
RBFOX1-207ENST00000547338 SMC2O95347 1197 aa19.37■□□□□ 0.69
RBFOX1-207ENST00000547338 SLC34A2O95436 690 aa19.37■□□□□ 0.69
RBFOX1-207ENST00000547338 CPT1AP50416 773 aa19.37■□□□□ 0.69
RBFOX1-207ENST00000547338 SP2Q02086 613 aa19.37■□□□□ 0.69
RBFOX1-207ENST00000547338 SEMA3FQ13275 785 aa19.37■□□□□ 0.69
RBFOX1-207ENST00000547338 ITGA7Q13683 1181 aa19.37■□□□□ 0.69
RBFOX1-207ENST00000547338 UBE2SQ16763 222 aa19.37■□□□□ 0.69
RBFOX1-207ENST00000547338 LONRF3Q496Y0 759 aa19.37■□□□□ 0.69
RBFOX1-207ENST00000547338 HEATR3Q7Z4Q2 680 aa19.37■□□□□ 0.69
RBFOX1-207ENST00000547338 SPC24Q8NBT2 197 aa19.37■□□□□ 0.69
RBFOX1-207ENST00000547338 AFG1LQ8WV93 481 aa19.37■□□□□ 0.69
RBFOX1-207ENST00000547338 VTI1AQ96AJ9 217 aa19.37■□□□□ 0.69
RBFOX1-207ENST00000547338 PRIMPOLQ96LW4 560 aa19.37■□□□□ 0.69
RBFOX1-207ENST00000547338 BCAS3Q9H6U6 928 aa19.37■□□□□ 0.69
RBFOX1-207ENST00000547338 SARSP49591 514 aaKnown RBP19.36■□□□□ 0.69
RBFOX1-207ENST00000547338 DPCR1Q3MIW9 517 aa19.36■□□□□ 0.69
RBFOX1-207ENST00000547338 TTC38Q5R3I4 469 aa19.36■□□□□ 0.69
RBFOX1-207ENST00000547338 PPP1R13LQ8WUF5 828 aa19.36■□□□□ 0.69
RBFOX1-207ENST00000547338 EMID1Q96A84 441 aaPredicted RBP19.36■□□□□ 0.69
RBFOX1-207ENST00000547338 INPP4AQ96PE3 977 aaPredicted RBP19.36■□□□□ 0.69
RBFOX1-207ENST00000547338 UBE2OQ9C0C9 1292 aaKnown RBP19.36■□□□□ 0.69
RBFOX1-207ENST00000547338 PSTPIP2Q9H939 334 aa19.36■□□□□ 0.69
RBFOX1-207ENST00000547338 MYH7BA7E2Y1 1941 aa19.36■□□□□ 0.69
RBFOX1-207ENST00000547338 DCDC2CA8MYV0 355 aa19.35■□□□□ 0.69
RBFOX1-207ENST00000547338 hCG_1984214I3L0E3 225 aa19.35■□□□□ 0.69
RBFOX1-207ENST00000547338 STXBP3O00186 592 aa19.35■□□□□ 0.69
RBFOX1-207ENST00000547338 ZEB2O60315 1214 aa19.35■□□□□ 0.69
RBFOX1-207ENST00000547338 GH1P01241 217 aa19.35■□□□□ 0.69
RBFOX1-207ENST00000547338 MMP3P08254 477 aa19.35■□□□□ 0.69
RBFOX1-207ENST00000547338 MYL3P08590 195 aa19.35■□□□□ 0.69
RBFOX1-207ENST00000547338 CCND2P30279 289 aa19.35■□□□□ 0.69
RBFOX1-207ENST00000547338 EPHB4P54760 987 aa19.35■□□□□ 0.69
RBFOX1-207ENST00000547338 ATP2C1P98194 919 aaPredicted RBP19.35■□□□□ 0.69
RBFOX1-207ENST00000547338 POSTNQ15063 836 aa19.35■□□□□ 0.69
RBFOX1-207ENST00000547338 NPY5RQ15761 445 aa19.35■□□□□ 0.69
RBFOX1-207ENST00000547338 ZNF713Q8N859 430 aaPredicted RBP19.35■□□□□ 0.69
RBFOX1-207ENST00000547338 TMEM39AQ9NV64 488 aa19.35■□□□□ 0.69
RBFOX1-207ENST00000547338 PRKAG2Q9UGJ0 569 aa19.35■□□□□ 0.69
RBFOX1-207ENST00000547338 PCDHA4Q9UN74 947 aa19.35■□□□□ 0.69
RBFOX1-207ENST00000547338 MROH7Q68CQ1 1323 aa19.35■□□□□ 0.69
RBFOX1-207ENST00000547338 LAD1O00515 517 aa19.35■□□□□ 0.69
RBFOX1-207ENST00000547338 ADAMTS3O15072 1205 aa19.35■□□□□ 0.69
RBFOX1-207ENST00000547338 UBA1P22314 1058 aaKnown RBP19.35■□□□□ 0.69
RBFOX1-207ENST00000547338 MYL5Q02045 173 aa19.35■□□□□ 0.69
RBFOX1-207ENST00000547338 TDHQ8IZJ6 230 aa19.35■□□□□ 0.69
RBFOX1-207ENST00000547338 BLIDQ8IZY5 108 aa19.35■□□□□ 0.69
RBFOX1-207ENST00000547338 SPATA20Q8TB22 786 aa19.35■□□□□ 0.69
RBFOX1-207ENST00000547338 KAT2BQ92831 832 aa19.35■□□□□ 0.69
RBFOX1-207ENST00000547338 ZNF830Q96NB3 372 aaPredicted RBP19.35■□□□□ 0.69
RBFOX1-207ENST00000547338 TRPV6Q9H1D0 765 aa19.35■□□□□ 0.69
RBFOX1-207ENST00000547338 KCNF1Q9H3M0 494 aa19.35■□□□□ 0.69
RBFOX1-207ENST00000547338 DOCK5Q9H7D0 1870 aa19.34■□□□□ 0.69
RBFOX1-207ENST00000547338 POLR2DO15514 142 aaKnown RBP19.34■□□□□ 0.69
RBFOX1-207ENST00000547338 NRDCO43847 1150 aa19.34■□□□□ 0.69
RBFOX1-207ENST00000547338 B4GALT4O60513 344 aa19.34■□□□□ 0.69
RBFOX1-207ENST00000547338 SLFN14P0C7P3 912 aa19.34■□□□□ 0.69
RBFOX1-207ENST00000547338 HOXD8P13378 290 aaPredicted RBP19.34■□□□□ 0.69
RBFOX1-207ENST00000547338 ORC2Q13416 577 aaPredicted RBP19.34■□□□□ 0.69
RBFOX1-207ENST00000547338 PCNX4Q63HM2 1172 aa19.34■□□□□ 0.69
RBFOX1-207ENST00000547338 SMARCE1Q969G3 411 aa19.34■□□□□ 0.69
RBFOX1-207ENST00000547338 LBHD1Q9BQE6 289 aaPredicted RBP19.34■□□□□ 0.69
RBFOX1-207ENST00000547338 MTG1Q9BT17 334 aaPredicted RBP19.34■□□□□ 0.69
RBFOX1-207ENST00000547338 CSRNP2Q9H175 543 aa19.34■□□□□ 0.69
RBFOX1-207ENST00000547338 PCDHA5Q9Y5H7 936 aa19.34■□□□□ 0.69
RBFOX1-207ENST00000547338 SORBS3O60504 671 aa19.33■□□□□ 0.68
RBFOX1-207ENST00000547338 ICAM3P32942 547 aa19.33■□□□□ 0.68
RBFOX1-207ENST00000547338 NCAPHQ15003 741 aa19.33■□□□□ 0.68
RBFOX1-207ENST00000547338 NBPF20Q3BBV1 942 aa19.33■□□□□ 0.68
RBFOX1-207ENST00000547338 C9orf50Q5SZB4 431 aa19.33■□□□□ 0.68
RBFOX1-207ENST00000547338 CELF3Q5SZQ8 465 aaKnown RBP19.33■□□□□ 0.68
RBFOX1-207ENST00000547338 KCND1Q9NSA2 647 aa19.33■□□□□ 0.68
RBFOX1-207ENST00000547338 BARHL2Q9NY43 387 aa19.33■□□□□ 0.68
RBFOX1-207ENST00000547338 TELO2Q9Y4R8 837 aa19.33■□□□□ 0.68
RBFOX1-207ENST00000547338 UMODL1Q5DID0 1318 aa19.32■□□□□ 0.68
RBFOX1-207ENST00000547338 SPATA31C2B4DYI2 1134 aa19.32■□□□□ 0.68
RBFOX1-207ENST00000547338 TIMP1P01033 207 aa19.32■□□□□ 0.68
RBFOX1-207ENST00000547338 ERCC5P28715 1186 aaPredicted RBP19.32■□□□□ 0.68
RBFOX1-207ENST00000547338 LONP1P36776 959 aaKnown RBP19.32■□□□□ 0.68
RBFOX1-207ENST00000547338 PPP1R18Q6NYC8 613 aa19.32■□□□□ 0.68
RBFOX1-207ENST00000547338 CUL5Q93034 780 aa19.32■□□□□ 0.68
RBFOX1-207ENST00000547338 LRCH3Q96II8 777 aa19.32■□□□□ 0.68
RBFOX1-207ENST00000547338 RIC8AQ9NPQ8 531 aa19.32■□□□□ 0.68
RBFOX1-207ENST00000547338 ACTN4O43707 911 aaKnown RBP19.31■□□□□ 0.68
RBFOX1-207ENST00000547338 GGPS1O95749 300 aa19.31■□□□□ 0.68
RBFOX1-207ENST00000547338 RAG1P15918 1043 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms