RNA–Protein interactions for RNA: ENST00000546974.1

COL2A1-209, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL2A1, Length 703 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-209ENST00000546974 NID2Q14112 1375 aa16.41■□□□□ 0.22
COL2A1-209ENST00000546974 TCF20Q9UGU0 1960 aaKnown RBP16.41■□□□□ 0.22
COL2A1-209ENST00000546974 RRN3P2A6NIE6 340 aa16.41■□□□□ 0.22
COL2A1-209ENST00000546974 RBAK-RBAKDNI3L0D1 243 aa16.41■□□□□ 0.22
COL2A1-209ENST00000546974 MEIS1O00470 390 aa16.41■□□□□ 0.22
COL2A1-209ENST00000546974 CHRNA1P02708 482 aa16.41■□□□□ 0.22
COL2A1-209ENST00000546974 RPLP2P05387 115 aaKnown RBP16.41■□□□□ 0.22
COL2A1-209ENST00000546974 ARP10275 920 aa16.41■□□□□ 0.22
COL2A1-209ENST00000546974 MGAT3Q09327 533 aa16.41■□□□□ 0.22
COL2A1-209ENST00000546974 SKIV2LQ15477 1246 aaKnown RBP16.41■□□□□ 0.22
COL2A1-209ENST00000546974 KRT40Q6A162 431 aa16.41■□□□□ 0.22
COL2A1-209ENST00000546974 RUFY4Q6ZNE9 571 aa16.41■□□□□ 0.22
COL2A1-209ENST00000546974 NIPA1Q7RTP0 329 aa16.41■□□□□ 0.22
COL2A1-209ENST00000546974 PLPPR4Q7Z2D5 763 aa16.41■□□□□ 0.22
COL2A1-209ENST00000546974 RSPH3Q86UC2 560 aa16.41■□□□□ 0.22
COL2A1-209ENST00000546974 BRF1Q92994 677 aa16.41■□□□□ 0.22
COL2A1-209ENST00000546974 AGXT2Q9BYV1 514 aa16.41■□□□□ 0.22
COL2A1-209ENST00000546974 IFIH1Q9BYX4 1025 aaKnown RBP16.41■□□□□ 0.22
COL2A1-209ENST00000546974 AZI2Q9H6S1 392 aa16.41■□□□□ 0.22
COL2A1-209ENST00000546974 SUGCTQ9HAC7 445 aa16.41■□□□□ 0.22
COL2A1-209ENST00000546974 AGO4Q9HCK5 861 aaKnown RBP16.41■□□□□ 0.22
COL2A1-209ENST00000546974 TMEM260Q9NX78 707 aa16.41■□□□□ 0.22
COL2A1-209ENST00000546974 TUBE1Q9UJT0 475 aa16.41■□□□□ 0.22
COL2A1-209ENST00000546974 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.4■□□□□ 0.22
COL2A1-209ENST00000546974 ESYT2A0FGR8 921 aa16.4■□□□□ 0.22
COL2A1-209ENST00000546974 REC8O95072 547 aa16.4■□□□□ 0.22
COL2A1-209ENST00000546974 ATG7O95352 703 aa16.4■□□□□ 0.22
COL2A1-209ENST00000546974 SCG2P13521 617 aa16.4■□□□□ 0.22
COL2A1-209ENST00000546974 RPS6KB1P23443 525 aa16.4■□□□□ 0.22
COL2A1-209ENST00000546974 PSMA5P28066 241 aa16.4■□□□□ 0.22
COL2A1-209ENST00000546974 ZNF76P36508 570 aa16.4■□□□□ 0.22
COL2A1-209ENST00000546974 ACTR2P61160 394 aa16.4■□□□□ 0.22
COL2A1-209ENST00000546974 AAK1Q2M2I8 961 aa16.4■□□□□ 0.22
COL2A1-209ENST00000546974 MARCH8Q5T0T0 291 aa16.4■□□□□ 0.22
COL2A1-209ENST00000546974 MCTP2Q6DN12 878 aa16.4■□□□□ 0.22
COL2A1-209ENST00000546974 IL27Q8NEV9 243 aa16.4■□□□□ 0.22
COL2A1-209ENST00000546974 SP7Q8TDD2 431 aaPredicted RBP16.4■□□□□ 0.22
COL2A1-209ENST00000546974 GDPD5Q8WTR4 605 aa16.4■□□□□ 0.22
COL2A1-209ENST00000546974 CCDC12Q8WUD4 166 aaPredicted RBP16.4■□□□□ 0.22
COL2A1-209ENST00000546974 ZMYND12Q9H0C1 365 aa16.4■□□□□ 0.22
COL2A1-209ENST00000546974 COG5Q9UP83 839 aa16.4■□□□□ 0.22
COL2A1-209ENST00000546974 BRWD1Q9NSI6 2320 aa16.4■□□□□ 0.22
COL2A1-209ENST00000546974 LOXHD1Q8IVV2 1947 aa16.39■□□□□ 0.21
COL2A1-209ENST00000546974 TNFRSF10AO00220 468 aa16.39■□□□□ 0.21
COL2A1-209ENST00000546974 PRPF3O43395 683 aaKnown RBP16.39■□□□□ 0.21
COL2A1-209ENST00000546974 EPB41L2O43491 1005 aaKnown RBP16.39■□□□□ 0.21
COL2A1-209ENST00000546974 CYP3A4P08684 503 aa16.39■□□□□ 0.21
COL2A1-209ENST00000546974 INSRRP14616 1297 aa16.39■□□□□ 0.21
COL2A1-209ENST00000546974 ITGB3BPQ13352 177 aaPredicted RBP16.39■□□□□ 0.21
COL2A1-209ENST00000546974 JAKMIP3Q5VZ66 844 aa16.39■□□□□ 0.21
COL2A1-209ENST00000546974 DNAJB3Q8WWF6 145 aa16.39■□□□□ 0.21
COL2A1-209ENST00000546974 MTUS1Q9ULD2 1270 aa16.39■□□□□ 0.21
COL2A1-209ENST00000546974 MYH9P35579 1960 aaKnown RBP16.38■□□□□ 0.21
COL2A1-209ENST00000546974 TTC3P53804 2025 aa16.38■□□□□ 0.21
COL2A1-209ENST00000546974 UPP2O95045 317 aa16.38■□□□□ 0.21
COL2A1-209ENST00000546974 GHRP10912 638 aa16.38■□□□□ 0.21
COL2A1-209ENST00000546974 SLC26A2P50443 739 aa16.38■□□□□ 0.21
COL2A1-209ENST00000546974 STAT5BP51692 787 aa16.38■□□□□ 0.21
COL2A1-209ENST00000546974 IGBP1P78318 339 aa16.38■□□□□ 0.21
COL2A1-209ENST00000546974 PLCB4Q15147 1175 aa16.38■□□□□ 0.21
COL2A1-209ENST00000546974 PKN1Q16512 942 aa16.38■□□□□ 0.21
COL2A1-209ENST00000546974 ADAMTS19Q8TE59 1207 aa16.38■□□□□ 0.21
COL2A1-209ENST00000546974 CRYGNQ8WXF5 182 aa16.38■□□□□ 0.21
COL2A1-209ENST00000546974 SAMD11Q96NU1 681 aa16.38■□□□□ 0.21
COL2A1-209ENST00000546974 YME1L1Q96TA2 773 aa16.38■□□□□ 0.21
COL2A1-209ENST00000546974 C17orf80Q9BSJ5 609 aa16.38■□□□□ 0.21
COL2A1-209ENST00000546974 C6orf50Q9HD87 102 aa16.38■□□□□ 0.21
COL2A1-209ENST00000546974 TRPC6Q9Y210 931 aa16.38■□□□□ 0.21
COL2A1-209ENST00000546974 CDY2AQ9Y6F7 541 aa16.38■□□□□ 0.21
COL2A1-209ENST00000546974 NLRC5Q86WI3 1866 aa16.37■□□□□ 0.21
COL2A1-209ENST00000546974 COL4A6Q14031 1691 aa16.37■□□□□ 0.21
COL2A1-209ENST00000546974 EVPLQ92817 2033 aa16.37■□□□□ 0.21
COL2A1-209ENST00000546974 IGKV6D-21A0A0A0MT36 114 aa16.37■□□□□ 0.21
COL2A1-209ENST00000546974 FAM86B1E9PN63 330 aa16.37■□□□□ 0.21
COL2A1-209ENST00000546974 FAM86B2P0C5J1 330 aa16.37■□□□□ 0.21
COL2A1-209ENST00000546974 BMP1P13497 986 aa16.37■□□□□ 0.21
COL2A1-209ENST00000546974 GNA11P29992 359 aa16.37■□□□□ 0.21
COL2A1-209ENST00000546974 AKAP17AQ02040 695 aaKnown RBP16.37■□□□□ 0.21
COL2A1-209ENST00000546974 TFF2Q03403 129 aa16.37■□□□□ 0.21
COL2A1-209ENST00000546974 LPIN1Q14693 890 aa16.37■□□□□ 0.21
COL2A1-209ENST00000546974 NTRK3Q16288 839 aa16.37■□□□□ 0.21
COL2A1-209ENST00000546974 FBXO47Q5MNV8 452 aa16.37■□□□□ 0.21
COL2A1-209ENST00000546974 PLA2G4DQ86XP0 818 aa16.37■□□□□ 0.21
COL2A1-209ENST00000546974 FBXO22Q8NEZ5 403 aa16.37■□□□□ 0.21
COL2A1-209ENST00000546974 UHRF1Q96T88 793 aaPredicted RBP16.37■□□□□ 0.21
COL2A1-209ENST00000546974 RNF26Q9BY78 433 aaPredicted RBP16.37■□□□□ 0.21
COL2A1-209ENST00000546974 PCDHA2Q9Y5H9 948 aa16.37■□□□□ 0.21
COL2A1-209ENST00000546974 BDP1A6H8Y1 2624 aa16.36■□□□□ 0.21
COL2A1-209ENST00000546974 RALGAPA2Q2PPJ7 1873 aa16.36■□□□□ 0.21
COL2A1-209ENST00000546974 IGLV3-22A0A075B6J6 115 aa16.36■□□□□ 0.21
COL2A1-209ENST00000546974 POTEB3A0JP26 581 aa16.36■□□□□ 0.21
COL2A1-209ENST00000546974 DHX15O43143 795 aaKnown RBP16.36■□□□□ 0.21
COL2A1-209ENST00000546974 EVCP57679 992 aa16.36■□□□□ 0.21
COL2A1-209ENST00000546974 MRPS6P82932 125 aaKnown RBP16.36■□□□□ 0.21
COL2A1-209ENST00000546974 IER5Q5VY09 327 aa16.36■□□□□ 0.21
COL2A1-209ENST00000546974 POTEBQ6S5H4 581 aa16.36■□□□□ 0.21
COL2A1-209ENST00000546974 ABHD15Q6UXT9 468 aa16.36■□□□□ 0.21
COL2A1-209ENST00000546974 TSHZ1Q6ZSZ6 1077 aa16.36■□□□□ 0.21
COL2A1-209ENST00000546974 REXO1Q8N1G1 1221 aaKnown RBP16.36■□□□□ 0.21
COL2A1-209ENST00000546974 BICD2Q8TD16 824 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms